GBrowse Details

Vigan.01G014600.01

Basic Information:
Name: Vigan.01G014600.01
Multiple alignment
Variant Information
Position: Chr01:891434..894944 (- strand)
Length: 3511
Functional Information:
Description: Similar to Uncharacterized protein. [K7LSA3, Glycine max]
GO: Biological Process: protein folding (GO:0006457)
Cellular Component: prefoldin complex (GO:0016272)
Molecular Function: unfolded protein binding (GO:0051082)
InterPro: Prefoldin beta-like (IPR002777)
Prefoldin (IPR009053)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:95.83,53.08,33.15,45.61,57.08,58.94,47.87,35.78
Arabidopsis thaliana homolog: AT1G29990.1
Automatic updates:
Name: NM_001248831 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306488 (LOC100306488), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:891434..891678 (- strand)
Length: 245
Type: three_prime_UTR
Position: Chr01:891679..891735 (- strand)
Length: 57
Type: CDS
Position: Chr01:892232..892292 (- strand)
Length: 61
Type: CDS
Position: Chr01:894479..894603 (- strand)
Length: 125
Type: CDS
Position: Chr01:894686..894756 (- strand)
Length: 71
Type: CDS
Position: Chr01:894845..894920 (- strand)
Length: 76
Type: CDS
Position: Chr01:894921..894944 (- strand)
Length: 24
Type: five_prime_UTR


>Vigan.01G014600.01
TGAAGGAAGA AGGTCGGAAA CACGATGAGT TCGTCCAACC TCAGAGATCT TCAACGTGAA TTGGAGAACA AAGCCAATGA
TCTCAGCAAG CTCCAGAAGG AAATTGCGAA GAATCACCAG ATGAGAAAGA AGTACACGAT TCAGCTTGGC GAGAACGAGC
TCGTCCTCAA GGAACTTGAT TTGTTGAAAG AAGACGCAAA TGTTTACAAG TTGATTGGGC CCGTACTTGT TAAGCAAGAT
TTGGCTGAGG CCAATGCAAA TGTCCGTAAG AGAATCGAAT ACATCTCTGC TGAATTGAAG CGGCTTGATG CCACTGTTCA
AGATTTGGAA GAGAAGCAAA ATAGCAAGAA AGATACGATA CTAAAATTGC AACAGAGGAT TCAATCTCTT CAGTCTGGGA
AAGGAAAGGC ATAATTTGCC CTAATATATT GTTTCAGCAT TGTAATTTAG GTGTGCTTAG CATTTGTATT TTGAGCCTTT
TCGTGGACTG AAAGTTAAGT AGAAAGAAAA CCGTTTGGAG ATTTGAGTGG ATATTATAGT TGCTATTTTC AAAGTTTGTT
TTATTAGAAG GTAATGAAAG AAAGATCTAT TCTTCCCTAT AAAATGAAAT TAATTTATAT AATTTTTGAA ATTTTTGAAT
TATGGTAACT CTATAAAAT

>Vigan.01G014600.01
ATGAGTTCGT CCAACCTCAG AGATCTTCAA CGTGAATTGG AGAACAAAGC CAATGATCTC AGCAAGCTCC AGAAGGAAAT
TGCGAAGAAT CACCAGATGA GAAAGAAGTA CACGATTCAG CTTGGCGAGA ACGAGCTCGT CCTCAAGGAA CTTGATTTGT
TGAAAGAAGA CGCAAATGTT TACAAGTTGA TTGGGCCCGT ACTTGTTAAG CAAGATTTGG CTGAGGCCAA TGCAAATGTC
CGTAAGAGAA TCGAATACAT CTCTGCTGAA TTGAAGCGGC TTGATGCCAC TGTTCAAGAT TTGGAAGAGA AGCAAAATAG
CAAGAAAGAT ACGATACTAA AATTGCAACA GAGGATTCAA TCTCTTCAGT CTGGGAAAGG AAAGGCATAA 

>Vigan.01G014600.01
MSSSNLRDLQ RELENKANDL SKLQKEIAKN HQMRKKYTIQ LGENELVLKE LDLLKEDANV YKLIGPVLVK QDLAEANANV
RKRIEYISAE LKRLDATVQD LEEKQNSKKD TILKLQQRIQ SLQSGKGKA*