GBrowse Details

Vigan.01G035900.01

Basic Information:
Name: Vigan.01G035900.01
Multiple alignment
Variant Information
Position: Chr01:2499625..2503539 (- strand)
Length: 3915
Functional Information:
Description: Similar to Uncharacterized protein. [W9QUK0, Morus notabilis.]
GO: Biological Process: ATP synthesis coupled proton transport (GO:0015986)
Cellular Component: mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) (GO:0000276)
Molecular Function: hydrogen ion transmembrane transporter activity (GO:0015078)
InterPro: ATPase, F0 complex, subunit G, mitochondrial (IPR006808)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:14.34,22.05,44.16,25.49,69.08,66.42,43.88,30.34
Arabidopsis thaliana homolog: AT4G29480.1
Automatic updates:
Name: NM_001248462 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306205 (LOC100306205), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001249047 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100499783 (LOC100499783), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:2499625..2499968 (- strand)
Length: 344
Type: three_prime_UTR
Position: Chr01:2499969..2500155 (- strand)
Length: 187
Type: CDS
Position: Chr01:2502752..2502933 (- strand)
Length: 182
Type: CDS
Position: Chr01:2502934..2503539 (- strand)
Length: 606
Type: five_prime_UTR


>Vigan.01G035900.01
TATTCTCATT TCTGATTTCT GTATTCACCT CAGATACTAT GATTCATCCA CCCTTTGTCT TTTTCATTTT CCCTGCAGAT
CTCGTTCTCT CCTCTTCCCG ATCTTCTTCT CTCACACTAT CATCTCTTTC ATTTTCAATA GTTACTTCAG TTGCGTTTTG
TTTTTGCTTA TATTGCCTAA TTTTATTTAT TTTTTATTTA TTTATGTGGT TGTAGTGTGA AATGGTTGAT AATTTTGGTT
CTGACATGAC ACCTAGAACC CTATTTTATT TATTTAATTG AAGTTCTTTT CATTTGATAT CAATGCATAA CTCCATCTTA
ATCCCTTTTT AGTTACTCAT AAAACATCAC CTGCTAAGCC AATGTAGAAA TGAAATGGAT GAGGTAGCAA CTGTTAGTGT
CGAAGGCCGA GATGTGTTCT AGATGTTGCT TTAAGAATAT GCCTTTAGCT GTTAATTTTC TTTTTGTTCT GACTATTGTC
AATGTGAGCT GAAGAAATTA TGATAGTTTG ATAAACTTCT GCTTAAACAC TTTTTGACTC TGTCTTATTC TAATATGATC
TTTCCCCTTT GGTCTAGGGT TTTGTTGTAC CTAGTTTGCA GACTTGATGG CGTCAAAGTT GCACCAGTTG CAGTCCAAAG
CATGTCAAGC ATCTCAATTT GTAGCCAAAC ATGGATCTAA CTACTACAGG CAATTGTTGG AACAGAATAA GCAATACATT
CAGGAGCCTC CGACTGTAGA AAAATGCAAC CTGCTATCGA AACAATTGTT CTACACCCGC CTTGCAAGTA TTCCGGGTCG
TACAGAGTCA TTCTGGAAGG AACTTGATTA TGCCAAGAAT TTGTGGAAGA ACAGGAAGGA CCTAAAGGTG GAAGATGCAG
GTATTGCTGC TTTGTTTGGC CTGGAATGCT TTGCATGGTT TTGCGCTGGT GAGATTGTTG GAAGGGGATT TACTTTCACC
GGTTACTATG TCTGACAAAA ACCACTTGAA AGTGTAGGTT TTATCAGTGC TTATATACTC TTAAAGCCAA TTTCTCTGAT
CATTCATACA TTGTGTGGAT TATTCTACAA GGCAATTTTT GTTATTCTGA ATTATTTTGT TTTGGGAGAA AGGTTGAAAA
ACTAGGGTTT AGTTTTCATA AGCCTCAATA ACCCCTTGTA GTTGAAAGCG GGGGGACGAA ACATGCGTTG TTCTCTTGTA
CTGTTGGAAA GCTAGTGATG GTATTCCACA ATGATGAATT GATGATATAC TCCTGCAAGT CTTTTAATTA TTTTTGTCAT
GCTTTTTTAT TTAAAAAAAA AGATTTAATT AAGCTGGAA

>Vigan.01G035900.01
ATGGCGTCAA AGTTGCACCA GTTGCAGTCC AAAGCATGTC AAGCATCTCA ATTTGTAGCC AAACATGGAT CTAACTACTA
CAGGCAATTG TTGGAACAGA ATAAGCAATA CATTCAGGAG CCTCCGACTG TAGAAAAATG CAACCTGCTA TCGAAACAAT
TGTTCTACAC CCGCCTTGCA AGTATTCCGG GTCGTACAGA GTCATTCTGG AAGGAACTTG ATTATGCCAA GAATTTGTGG
AAGAACAGGA AGGACCTAAA GGTGGAAGAT GCAGGTATTG CTGCTTTGTT TGGCCTGGAA TGCTTTGCAT GGTTTTGCGC
TGGTGAGATT GTTGGAAGGG GATTTACTTT CACCGGTTAC TATGTCTGA

>Vigan.01G035900.01
MASKLHQLQS KACQASQFVA KHGSNYYRQL LEQNKQYIQE PPTVEKCNLL SKQLFYTRLA SIPGRTESFW KELDYAKNLW
KNRKDLKVED AGIAALFGLE CFAWFCAGEI VGRGFTFTGY YV*