GBrowse Details

Vigan.01G039400.01

Basic Information:
Name: Vigan.01G039400.01
Multiple alignment
Variant Information
Position: Chr01:2818192..2821218 (+ strand)
Length: 3027
Functional Information:
Description: Similar to Uncharacterized protein. [I1K660, Glycine max]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: iron ion binding (GO:0005506)
Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705)
Molecular Function: heme binding (GO:0020037)
InterPro: Cytochrome P450 (IPR001128)
Cytochrome P450, E-class, group I (IPR002401)
Cytochrome P450, conserved site (IPR017972)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.03,0.00,0.30,0.00,17.05,47.97,2.41,0.08
Arabidopsis thaliana homolog: AT5G36110.1
Automatic updates:
Name: BT096613 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-20N8 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:2818192..2818221 (+ strand)
Length: 30
Type: five_prime_UTR
Position: Chr01:2818222..2818757 (+ strand)
Length: 536
Type: CDS
Position: Chr01:2819019..2819437 (+ strand)
Length: 419
Type: CDS
Position: Chr01:2820058..2820245 (+ strand)
Length: 188
Type: CDS
Position: Chr01:2820652..2820951 (+ strand)
Length: 300
Type: CDS
Position: Chr01:2820952..2821218 (+ strand)
Length: 267
Type: three_prime_UTR


>Vigan.01G039400.01
CTTCAACAAG AAACACATTG AGCCAAAAGC ATGGAGCATT TCTATCTTTC CCTCCTTCTC CTCTTCGTTT CTCTCGTCAC
CTTCTTCTTC TTCCTCCTTT TCCACAAGCA CCGATCTCCC TTCTCCGCCC CCAACCTCCC ACCGGGAGCC ACCGGTTTCC
CGGTCATCGG GGAGACTCTC CAGTTTCTCT CCACCGGATG GAAAGGTCAC CCGGAGAAGT TCATTTTCGA CCGCATGATC
AAGTACTCCT CCAAGCTCTT CAAAACCTCC ATCCTAGGGG AACCCGCCGT GGTGTTCTGC GGCGCCGCCT CCAACAAGTT
TTTGTTCTCG AACGAGAACA AGCTGGTGGC GGCGTGGTGG CCGGAGAGCG TGAACAAGGT GTTCCCCACG ACGGTGCAGA
CGAACTCGAA GGAAGAATCG AAGAAGATGA GAAAGTTGCT CCCACAGTTC CTAAAACCCG AGGCTCTCCA ACGCTACGTT
CCCATCATGG ACACCATCGC ACAGACCCAC TTTTCTTCCC TTTGGGACAA CCACACCCAT CTCACTGTCT ATCCCTTGGC
CAAAAGGTAC ACGTTTATGT TGGCGTGTCG TTTGTTTATG AGCGTTGAGG ATGTGAATCA CGTGGCGAAA TTTGAGAACC
CTTTTCATCT TTTGGCGGCC GGAATCATAT CAGTGCCCAT CGATCTTCCC GGAACGCCGT TCTACAAAGC TATCAGAGCA
GCAAAAAGCA TCAGAAAGGA GCTGTCGAAG ATCATCAGAG AGAGGAAAGT TGCTTTGGGC CAAGGAAACG CTTCGCCAAC
ACAGGACATA TTGTCTCACA TGCTGCTCAC GTGCGATGAG AACGGACATT TCATGAGTGA ATTGGACATT GCAGACAAGA
TTCTCGGACT TTTGATCGGT GGTCATGACA CTGCAAGTGC TGCATGCACT TTCGTCGTCA AATACCTCGC CGAACTCCCT
CACATTTATG ATGCAGTCTA TCGAGAGCAA ATGGAAATTG CAAAGTCGAA ATTGCCGGGA GAGTTATTGA ATTGGGATGA
TATAAACAGG ATGAAATATT CTTGGAATGT AGCTTGTGAA GTGATGAGAA TTGCTCCTCC CCTTCAAGGA GGTTTTAGAG
AAGCTATCAA TGACTTTACT TTCAATGGCT TCTCAATTCC AAAGGGATGG AAGTTGTATT GGAGTGCAAA TTCAACACAC
AAAAGTAGAG AATACTTTCG AGAACCAGAG AAATTTGATC CAAGCAGATT CGAAGGAGAA GGACCAGCTC CTTACACTTT
TGTGCCATTC GGTGGAGGAC CAAGAATGTG CCCTGGAAAA GAGTATGCAA GGTTGGAAAT ATTGGTTTTC ATGCACAACT
TAGTGAAAAG GTTTAAGTGG GAAAAAGTGA TTCCAGATGA AAAGATCATC GTTGATCCCT TACCCATTCC TGCAAAAAAC
CTCCCAATTC GTCTTTACCC TCACAAACCC TAAAAACATA CACAAAAACT CTTCTGTGCT TCCTACAAAT CAATCTACCA
TACGCATACA TATATACTTA TACTTCAAAT GTTTTCTCTG CTTTATATTT ATTCTTTTAC ACTTTTAATT TCTTGTATTC
GAGGGACTTG TCAGTAAAAT ACTTACACAA CTTGTATATT TCCAAGTGAT TATTGTTTTG TATTAAAATA TCAGTTGGGG
TTGACGAGAT AATTTGCATT TTACCCCTTT CAGTTATATG AATTATACTT GTTTACTATA 

>Vigan.01G039400.01
ATGGAGCATT TCTATCTTTC CCTCCTTCTC CTCTTCGTTT CTCTCGTCAC CTTCTTCTTC TTCCTCCTTT TCCACAAGCA
CCGATCTCCC TTCTCCGCCC CCAACCTCCC ACCGGGAGCC ACCGGTTTCC CGGTCATCGG GGAGACTCTC CAGTTTCTCT
CCACCGGATG GAAAGGTCAC CCGGAGAAGT TCATTTTCGA CCGCATGATC AAGTACTCCT CCAAGCTCTT CAAAACCTCC
ATCCTAGGGG AACCCGCCGT GGTGTTCTGC GGCGCCGCCT CCAACAAGTT TTTGTTCTCG AACGAGAACA AGCTGGTGGC
GGCGTGGTGG CCGGAGAGCG TGAACAAGGT GTTCCCCACG ACGGTGCAGA CGAACTCGAA GGAAGAATCG AAGAAGATGA
GAAAGTTGCT CCCACAGTTC CTAAAACCCG AGGCTCTCCA ACGCTACGTT CCCATCATGG ACACCATCGC ACAGACCCAC
TTTTCTTCCC TTTGGGACAA CCACACCCAT CTCACTGTCT ATCCCTTGGC CAAAAGGTAC ACGTTTATGT TGGCGTGTCG
TTTGTTTATG AGCGTTGAGG ATGTGAATCA CGTGGCGAAA TTTGAGAACC CTTTTCATCT TTTGGCGGCC GGAATCATAT
CAGTGCCCAT CGATCTTCCC GGAACGCCGT TCTACAAAGC TATCAGAGCA GCAAAAAGCA TCAGAAAGGA GCTGTCGAAG
ATCATCAGAG AGAGGAAAGT TGCTTTGGGC CAAGGAAACG CTTCGCCAAC ACAGGACATA TTGTCTCACA TGCTGCTCAC
GTGCGATGAG AACGGACATT TCATGAGTGA ATTGGACATT GCAGACAAGA TTCTCGGACT TTTGATCGGT GGTCATGACA
CTGCAAGTGC TGCATGCACT TTCGTCGTCA AATACCTCGC CGAACTCCCT CACATTTATG ATGCAGTCTA TCGAGAGCAA
ATGGAAATTG CAAAGTCGAA ATTGCCGGGA GAGTTATTGA ATTGGGATGA TATAAACAGG ATGAAATATT CTTGGAATGT
AGCTTGTGAA GTGATGAGAA TTGCTCCTCC CCTTCAAGGA GGTTTTAGAG AAGCTATCAA TGACTTTACT TTCAATGGCT
TCTCAATTCC AAAGGGATGG AAGTTGTATT GGAGTGCAAA TTCAACACAC AAAAGTAGAG AATACTTTCG AGAACCAGAG
AAATTTGATC CAAGCAGATT CGAAGGAGAA GGACCAGCTC CTTACACTTT TGTGCCATTC GGTGGAGGAC CAAGAATGTG
CCCTGGAAAA GAGTATGCAA GGTTGGAAAT ATTGGTTTTC ATGCACAACT TAGTGAAAAG GTTTAAGTGG GAAAAAGTGA
TTCCAGATGA AAAGATCATC GTTGATCCCT TACCCATTCC TGCAAAAAAC CTCCCAATTC GTCTTTACCC TCACAAACCC
TAA

>Vigan.01G039400.01
MEHFYLSLLL LFVSLVTFFF FLLFHKHRSP FSAPNLPPGA TGFPVIGETL QFLSTGWKGH PEKFIFDRMI KYSSKLFKTS
ILGEPAVVFC GAASNKFLFS NENKLVAAWW PESVNKVFPT TVQTNSKEES KKMRKLLPQF LKPEALQRYV PIMDTIAQTH
FSSLWDNHTH LTVYPLAKRY TFMLACRLFM SVEDVNHVAK FENPFHLLAA GIISVPIDLP GTPFYKAIRA AKSIRKELSK
IIRERKVALG QGNASPTQDI LSHMLLTCDE NGHFMSELDI ADKILGLLIG GHDTASAACT FVVKYLAELP HIYDAVYREQ
MEIAKSKLPG ELLNWDDINR MKYSWNVACE VMRIAPPLQG GFREAINDFT FNGFSIPKGW KLYWSANSTH KSREYFREPE
KFDPSRFEGE GPAPYTFVPF GGGPRMCPGK EYARLEILVF MHNLVKRFKW EKVIPDEKII VDPLPIPAKN LPIRLYPHKP
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