GBrowse Details

Vigan.01G066700.01

Basic Information:
Name: Vigan.01G066700.01
Multiple alignment
Variant Information
Position: Chr01:5282927..5286986 (+ strand)
Length: 4060
Functional Information:
Description: Similar to Uncharacterized protein. [Q43466, Glycine max]
GO: Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672)
Molecular Function: protein serine/threonine kinase activity (GO:0004674)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase domain (IPR000719)
Serine/threonine- / dual specificity protein kinase, catalytic domain (IPR002290)
Serine/threonine-protein kinase, active site (IPR008271)
Protein kinase-like domain (IPR011009)
Protein kinase, ATP binding site (IPR017441)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:37.76,24.15,27.96,37.53,26.02,25.80,42.26,44.01
Arabidopsis thaliana homolog: AT1G10940.2, AT1G60940.1, AT2G23030.1, AT5G08590.1, AT5G63650.1
Automatic updates:
Name: NM_001249814 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max protein kinase 3 (SPK-3), mRNA.
PubMed ID: 9267431 NCBI(pubmed)
Status: Known Variant
Name: NM_001255671 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max serine/threonine-protein kinase SRK2A-like (LOC100804018), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:5282927..5283512 (+ strand)
Length: 586
Type: five_prime_UTR
Position: Chr01:5283513..5283632 (+ strand)
Length: 120
Type: CDS
Position: Chr01:5284154..5284228 (+ strand)
Length: 75
Type: CDS
Position: Chr01:5284326..5284427 (+ strand)
Length: 102
Type: CDS
Position: Chr01:5284517..5284570 (+ strand)
Length: 54
Type: CDS
Position: Chr01:5284665..5284757 (+ strand)
Length: 93
Type: CDS
Position: Chr01:5284850..5284942 (+ strand)
Length: 93
Type: CDS
Position: Chr01:5285239..5285343 (+ strand)
Length: 105
Type: CDS
Position: Chr01:5285434..5285532 (+ strand)
Length: 99
Type: CDS
Position: Chr01:5286297..5286611 (+ strand)
Length: 315
Type: CDS
Position: Chr01:5286612..5286986 (+ strand)
Length: 375
Type: three_prime_UTR


>Vigan.01G066700.01
AAAAAAAAGA GAAGGTAGCT TGTGAAAACG ACAAAGAAGA TTGAGGAATG AAGAGAAAGG AGTCCCTGTC CTGTCCCCTA
CAGCATCGGC GTTGTAAGAG ATCCCATTCC AAATACCAAT TCCAAATTTG CAATCTCAAT TCTCAGTTTC ACAACTCAAA
TAAAAAACCA AACCAAAAGG GTACTCACTA ATTAACTGGA TTCAAGCTGG TTTGCCTTCA TCTTCTTCAT CTTCATTGAT
TAGATCCCAT CCTACCCCAA TTTTCTAATG TTTTCTCTCT CACTCTCCCA CGTGCACTTT CTTCTCTCCC GCTCTAAATA
ATTCTTCATT CCCACCCCCC AATCTCTCTC TCTATACATA TATTACACAT TATTGTATGT GTGTGTGGAA AAAGAACCGT
TTTTTTTTAT CAGTGAAAGG GACCACCTTT ATATAACCCT TTTGATCAAA GTGTAAAATG GTGTTGTGAT TCTACAAGGG
TCTTGCATGC CCCCTCTGAG TTTCAAGTTT CAAGTTTGAA CCCCCTTTCT TCCATTCGTA ATCGTAATAA CAGGCAGCAT
CTTTGGTTGA GTTGAGGGAT TTGATTATGG AAAAGTATGA GGCTGTCAAG GATTTGGGGG CTGGGAATTT TGGGGTGGCC
AGGCTCATGA GGAACAAGGA GACCAAGGAG CTTGTTGCCA TGAAATACAT CGAGCGTGGT CAAAAGATTG ACGAGAATGT
GGCAAGAGAG ATTATCAACC ACAGATCCCT TCGGCACCCC AATATCATTC GCTTCAAGGA GGTGGTTTTG ACGCCCACTC
ATTTGGCCAT AGTGATGGAG TATGCCGCTG GAGGAGAGCT CTTTGAGAGG ATATGCAATG CTGGCAGGTT CAGTGAAGAT
GAGGCTAGAT ATTTCTTTCA GCAGCTTATT TCTGGTGTGC ACTACTGTCA TGCCATGCAA ATTTGCCACA GAGATTTGAA
GTTAGAAAAC ACACTTTTAG ATGGTAGCCC TGCACCCCGC TTGAAAATTT GTGACTTTGG CTATTCCAAG TCATCTCTGC
TTCATTCACG ACCCAAATCA ACTGTTGGAA CTCCAGCTTA TATAGCACCA GAGGTTCTTT CCAGGAGGGA GTATGATGGG
AAGTTGGCTG ATGTATGGTC ATGTGGAGTG ACTCTTTATG TGATGCTGGT TGGAGCTTAC CCTTTTGAGG ATCAGGATGA
CCCTAGGAAT TTTAGGAAAA CAATTCAGCG AATAATGGCT GTTCAATACA AAATCCCTGA TTATGTTCAC ATATCTCAAG
ACTGCAGACA CCTCCTTTCT CGTATATTTG TAGCAAATCC ATTAAGGAGA ATCTCCCTTA AGGAAATTAA GAACCACCCA
TGGTTTTTGA AGAATCTTCC AAGAGAGCTA ACTGAATCAG CTCAAGCTGT CTATTACCAG AGAGGCAACC CAAGTTTTTC
TGTTCAAAGT GTGGAGGAGA TAATGAAAAT TGTGGGAGAA GCAAGGGACC CTCCTCCAGT TTCTAGGCCT GTCAAAGGTT
TTGGCTGGGA CGGTGAAGAA GAGGAAGGGG AAGAAGATGT GAAGGAAGAG GAGGATGAAG AAGATGAATA TGACAAGAGG
GTGAAGGAAG TTCATGCCAG TGGAGAATTT CAAATCAGTT AAGCAGTATA ATTCTTGTGT TCTTGGTTAA AGTTTCATTT
TTTATGCTAG AAGTCACCTA TTTTTATGTG TACTATAATT TATATTAACT ACTATAAACC AGCGAGGCAG TCTAAGTCAC
TGCACTGTCC ACTGTCCATG TAATGTATTA GTATTACCTG TATCACCATG GAAGTCGTGT ATGAAAACAG TAGTTGTCTG
ATAACTTTTA AATTACTCAT CCATTTATAA TCCAGCTAGT TAACTTTAAA ATGCTTTTAT ATCACACGAA ACAATGACCT
CAACCATGTA TTGTGCCTTA AGTTCTTGTA CTTGGTTCTG GTTTACTTTG AGAATGCTAT ATCACAGAAA GTGGATGATT
ATCTTGCTCG AGTCAGA

>Vigan.01G066700.01
ATGGAAAAGT ATGAGGCTGT CAAGGATTTG GGGGCTGGGA ATTTTGGGGT GGCCAGGCTC ATGAGGAACA AGGAGACCAA
GGAGCTTGTT GCCATGAAAT ACATCGAGCG TGGTCAAAAG ATTGACGAGA ATGTGGCAAG AGAGATTATC AACCACAGAT
CCCTTCGGCA CCCCAATATC ATTCGCTTCA AGGAGGTGGT TTTGACGCCC ACTCATTTGG CCATAGTGAT GGAGTATGCC
GCTGGAGGAG AGCTCTTTGA GAGGATATGC AATGCTGGCA GGTTCAGTGA AGATGAGGCT AGATATTTCT TTCAGCAGCT
TATTTCTGGT GTGCACTACT GTCATGCCAT GCAAATTTGC CACAGAGATT TGAAGTTAGA AAACACACTT TTAGATGGTA
GCCCTGCACC CCGCTTGAAA ATTTGTGACT TTGGCTATTC CAAGTCATCT CTGCTTCATT CACGACCCAA ATCAACTGTT
GGAACTCCAG CTTATATAGC ACCAGAGGTT CTTTCCAGGA GGGAGTATGA TGGGAAGTTG GCTGATGTAT GGTCATGTGG
AGTGACTCTT TATGTGATGC TGGTTGGAGC TTACCCTTTT GAGGATCAGG ATGACCCTAG GAATTTTAGG AAAACAATTC
AGCGAATAAT GGCTGTTCAA TACAAAATCC CTGATTATGT TCACATATCT CAAGACTGCA GACACCTCCT TTCTCGTATA
TTTGTAGCAA ATCCATTAAG GAGAATCTCC CTTAAGGAAA TTAAGAACCA CCCATGGTTT TTGAAGAATC TTCCAAGAGA
GCTAACTGAA TCAGCTCAAG CTGTCTATTA CCAGAGAGGC AACCCAAGTT TTTCTGTTCA AAGTGTGGAG GAGATAATGA
AAATTGTGGG AGAAGCAAGG GACCCTCCTC CAGTTTCTAG GCCTGTCAAA GGTTTTGGCT GGGACGGTGA AGAAGAGGAA
GGGGAAGAAG ATGTGAAGGA AGAGGAGGAT GAAGAAGATG AATATGACAA GAGGGTGAAG GAAGTTCATG CCAGTGGAGA
ATTTCAAATC AGTTAA

>Vigan.01G066700.01
MEKYEAVKDL GAGNFGVARL MRNKETKELV AMKYIERGQK IDENVAREII NHRSLRHPNI IRFKEVVLTP THLAIVMEYA
AGGELFERIC NAGRFSEDEA RYFFQQLISG VHYCHAMQIC HRDLKLENTL LDGSPAPRLK ICDFGYSKSS LLHSRPKSTV
GTPAYIAPEV LSRREYDGKL ADVWSCGVTL YVMLVGAYPF EDQDDPRNFR KTIQRIMAVQ YKIPDYVHIS QDCRHLLSRI
FVANPLRRIS LKEIKNHPWF LKNLPRELTE SAQAVYYQRG NPSFSVQSVE EIMKIVGEAR DPPPVSRPVK GFGWDGEEEE
GEEDVKEEED EEDEYDKRVK EVHASGEFQI S*