GBrowse Details

Vigan.01G084200.01

Basic Information:
Name: Vigan.01G084200.01
Multiple alignment
Variant Information
Position: Chr01:6891360..6895344 (- strand)
Length: 3985
Functional Information:
Description: Similar to Myo-inositol-1-phosphate synthase. [Q2MJR4, Glycine max]
GO: Biological Process: inositol biosynthetic process (GO:0006021)
Biological Process: phospholipid biosynthetic process (GO:0008654)
Molecular Function: inositol-3-phosphate synthase activity (GO:0004512)
InterPro: Myo-inositol-1-phosphate synthase (IPR002587)
Myo-inositol-1-phosphate synthase, GAPDH-like (IPR013021)
NAD(P)-binding domain (IPR016040)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.41,0.70,177.04,124.14,65.43,12.81,9.22,661.78
Arabidopsis thaliana homolog: AT2G22240.1, AT4G39800.1, AT5G10170.1
Automatic updates:
Name: NM_001279023 NCBI(nuccore)
Organism: Cicer arietinum
Description: Cicer arietinum inositol-3-phosphate synthase-like (LOC101499706), mRNA.
PubMed ID: 23065054 NCBI(pubmed)
18721262 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr01:6891360..6891866 (- strand)
Length: 507
Type: three_prime_UTR
Position: Chr01:6891867..6892130 (- strand)
Length: 264
Type: CDS
Position: Chr01:6892214..6892402 (- strand)
Length: 189
Type: CDS
Position: Chr01:6892489..6892665 (- strand)
Length: 177
Type: CDS
Position: Chr01:6892872..6892987 (- strand)
Length: 116
Type: CDS
Position: Chr01:6893090..6893316 (- strand)
Length: 227
Type: CDS
Position: Chr01:6893454..6893701 (- strand)
Length: 248
Type: CDS
Position: Chr01:6894703..6894838 (- strand)
Length: 136
Type: CDS
Position: Chr01:6894918..6894986 (- strand)
Length: 69
Type: CDS
Position: Chr01:6895083..6895270 (- strand)
Length: 188
Type: CDS
Position: Chr01:6895271..6895344 (- strand)
Length: 74
Type: five_prime_UTR

>Vigan.01G084200.01 class=Sequence position=Chr01:6891360..6895344 (- strand)
CTGCACACAA CCATCCATCT TCTTCTTCTT CTTCCTTAAG AGAGTTTTTC TTTTTACCTT TGGAAGCAAG AAAAATGTTT
ATCCAGAGTT TTAAGGTGGA GAGTCCCAAC GTGAAATACA CAGAGAGTGA GATTGAGTCT GTGTATAACT ACGAAACCAC
TGAACTTGTT CACGAGAACA AGAATGGCAG TTATCAGTGG GTTGTGAAGC CTAAAACTGT GAAATATGAA TTCAAAACAA
ACACCGATGT GCCTAAACTA GGGTTCGTTC TCTGCGTTTT CCCTTTTCTG TTTTTACTGT GGTTTTGAAT GATTTGTATT
ACTTGTTTTG TTGATGTGAT TTGTTTGATG TGTGTTAGGG TAATGCTTGT TGGTTGGGGT GGAAACAATG GCTCAACGCT
CACCGGTGGT GTTATTGCTA ACAGAGAGTT AGTTTGATTT TCTTAACCAT TAGTTTTGGG ACTTGTTATT ATTATTTGTG
GCTAATGAGC ATGTTATGAT TCTCAGGGGT ATATCATGGG CAACAAAGGA CAAGATTCAA CAGGCCAATT ACTTTGGGTC
TCTGACCCAG GCATCAGCTA TCAGAGTAGG GTCTTTCCAA GGAGAGGAAA TATATGCTCC TTTCAAGAGT CTGCTTCCAA
TGGTATTCTT TCGTTTCTTT ACACTCATTC GTATTTTACA ACTCATTTCT GAACTTGTTT TTGTCATTTT CGTAAGTTGA
ATAAAATTAA AGCTGTAAGA AACAAGTTAA ACTGCAAATT AATCAGAGAT GAAGAATGAA TCAGTAAATA AAAAACAATA
TAATAAGAAA AATAAAAAAG TTTTAAGCAC TTAATAATAC AATTTTTTAA ATGGAAATAC CTAAACTAGT CATATTAAAA
TATTTACATA AAGATTAACT TCATATTAGG GATAACTGGT GGTGTATATG TTCTAACGTA TTAAAAACAG ATAGGTTAAT
AAACATGCAT GTTCCGTGAC TCAACGTTTT GCACAATTAA AGTGCCCAAA AGAAATATTT TTATATTTTG TTTTAAATAT
AGATACGAGT TTATGATTTA AGGATGATGT AGAAAAAAAA ATATACTATT AAAACTTATT TTTCTTTTCT TTTTAATAAA
GTAACCATTG AAATTGACAT AAATTATCCA CATAAAAACA AAAAACAATT AATGATATTG CACTAAAGTT TTCTTGTCAA
AATATTATTA AAATCTGAAT ATTCTCTTTT TTATCCTGTC CCACTTATTT TATTTATTTT CCTTTGTCCT TGAGTTCAAT
TATCTGAGAA ATGCTTCTTT ATCAAGGAAA AAGTGAAGAA GGCCCACAAA GTATTGGGGC ACGGGGATAA AAACGAAAAC
AATAACTGGA GATGAAAATT TTTATTTAAT AAAAATAAGT ATTAAAACCT AAAGTATTCA AAATTATTCC ATTTATATTA
ACTCATATTT TTCTTACTAA AGGGAATATA TAATTATTTT AAATTGTATA GATTAAATAA ATACACTGTA CAACATGGTA
TAAACATGTG AGCACACAAG GTGGACATGA ACTCATGATA CTAACATGTC GAAACATAAA AATTCTTAAA TCAATTATAC
TTTTTGTCCG ACCATGCATG ATCATGAGCG TTAATTTATG CAGGTAAACC CTGATGATAT TGTGTTCGGG GGATGGGATA
TCAGCAACTT GAACCTGGCT GATGCCATGG CCAGGGCCAA GGTGTTTGAC ATCGACCTGC AGAAACAGTT GAGGCCTTAC
ATGGAATCCA TGACTCCACT CCCTGGAATC TTTGATCCCG ATTTCATTGC TGCCAACCAA GGAGACCGTG CCAACAACGT
CATCAAGGGC ACAAAGAAAG AACAAGTGCA ACAAATCATC AAAGACATTA AGTAAGTCCA ACACTCTCAA TCTAACTAAA
TAACTACATC TCTATGTATA CACGCAGGGA CACACTAGTT AGCATCTTGT ATACTCTGTT TGAAACTCAC AGAATTTGTT
TCATCCACTA TTTGTCATGA AAACTCAGGG AGTTTAAGGA AAAGAGCAAG GTTGACAAGG TGGTTGTGCT CTGGACAGCC
AACACAGAGA GGTACAGCAA CGTAGTTGTG GGATTAAACG ACACCGAGGA AAACCTCTTG GCTTCCTTGG ACAGGAACGA
GGCTGAGATT TCCCCTTCCA CCTTGTATGC CATTGCTTGT GTCATGGAAA ATGTTCCCTT CATAAATGGA AGCCCTCAGA
ACACCTTTGT CCCAGGTTCC TTGTTAATTA TTAATTATTA TTATTATTAT TATGTGGGTC GTTAAGTGTC TTAAAAGAAA
AAGTAAAATT GATGAACTTT GGCCGTGTTG TCATCAGGGC TGATTGATCT GGCCATCAGG AGGAACAGTT TGATTGGAGG
AGATGACTTT AAGAGTGGTC AGACCAAAAT GAAATCTGTG TTGGTGGATT TCCTTGTGGG GGCAGGCATC AAGGTACATC
TTTTGTTCTT TTTCTTACTA ATGTCGGATC ACGTGGTGCT ACTTTCACTG GTTAAGGACA GACTATCATT TATTAAATTG
TTTGTTTTCA TGCTTAACTG GAATCAAAAT AATGTATTGT GTTATACTAT ATTTATTTAT ACTTGCTAAT AAAGTAGAAG
GAAATTAATG TTTTTTATTG TCTTGGTGAT GAGTAACAGC CAACATCAAT AGTGAGTTAC AACCATCTGG GAAACAATGA
TGGTATGAAT CTTTCAGCCC CTCAAACTTT CCGCTCCAAG GAAATTTCCA AGAGCAATGT TGTTGACGAC ATGGTCAACA
GCAACGCCAT CCTCTATGAA CCTGGCGAAC ATCCTGACCA TGTTGTTGTT ATTAAGGTAA CTTTTTGTTT CACATTTTAA
TATTGCTCAC TCTAATTGGT TGTTTATCTG ATTCTTTTGT TTACTGGTTA TTGAATTTGC AGTACGTGCC TTACGTTGCG
GATAGCAAGA GGGCGATGGA TGAGTACACT TCAGAGATAT TCATGGGTGG AAAGAACACA ATAGTGTTAC ACAACACCTG
TGAGGATTCA CTGTTAGCTG CTCCTATTAT CTTGGACCTG GTTCTTCTTG CTGAGCTTAG CACTCGAATC CAATTTAAAG
CTGAAAATGA GGTATGCATA TTATGTTTCT GAATCTTCCA ATTTCCAACT TCTGTAATTT TCAGCTTTCC AAGACTAAAT
TATGGCGTTA ACAGGGCAAG TTTCACTCAT TCCACCCCGT TGCCACCATC CTCAGTTACT TGACCAAGGC CCCTCTTGTA
AGTTTAAATT CTCTATCTAT ACATAATATG AAATTTTGGA AGGTTGCAAA ACTAATTATT GTGGTGGCAA CAACACAGGT
TCCACCTGGT ACCCCAGTGG TGAATGCATT ATCAAAGCAG AGAGCTATGC TGGAAAATAT CATGAGGGCT TGTGTTGGAT
TAGCTCCCGA GAACAACATG ATCCTGGAGT ACAAGTGAAG TAGGAATGAG AGAGCTACGA TTTGGGGATA GTTTGGTTAA
ATGTGCCTAT AACTGAACTT ATATCCCATA CCCTCTTTTT CTGATATCTA TTGCAAAATG TGAATTTAAA GATCGTACAT
CTCTGTGTCT TTGTTCCTGT GTCTTTGTTC CTGCGACTCA TTTGAGAGCA GGCTATCTAT GCATGTAAAA TAATACAAGT
TATTCAAGTG TCTCGTGCTT AATTCACTTT TCTATTACCT TTTTCTATTA TCTGTGTTTG GAAGCGTTGG CACAGAACCT
CTCTTGGAAC TGATAACTTA GTGTTAACTT CTAGGACTGG TTAGGACCAC ACATCACATG AACAAACATA TTCTAAGAAT
CACTCACAGT TCTTCATAAA AGGTAATGGC AATTATTGAG TATATTTGGA ATACAAACAT TTAAACCAGA GATACTTGAT
CCATCTGCAT CTGGACCTGA TATTGAAAGT TGTGAATCAG TAACATGATT CTTATATTTG TATTA

>Vigan.01G084200.01
CTGCACACAA CCATCCATCT TCTTCTTCTT CTTCCTTAAG AGAGTTTTTC TTTTTACCTT TGGAAGCAAG AAAAATGTTT
ATCCAGAGTT TTAAGGTGGA GAGTCCCAAC GTGAAATACA CAGAGAGTGA GATTGAGTCT GTGTATAACT ACGAAACCAC
TGAACTTGTT CACGAGAACA AGAATGGCAG TTATCAGTGG GTTGTGAAGC CTAAAACTGT GAAATATGAA TTCAAAACAA
ACACCGATGT GCCTAAACTA GGGGTAATGC TTGTTGGTTG GGGTGGAAAC AATGGCTCAA CGCTCACCGG TGGTGTTATT
GCTAACAGAG AGGGTATATC ATGGGCAACA AAGGACAAGA TTCAACAGGC CAATTACTTT GGGTCTCTGA CCCAGGCATC
AGCTATCAGA GTAGGGTCTT TCCAAGGAGA GGAAATATAT GCTCCTTTCA AGAGTCTGCT TCCAATGGTA AACCCTGATG
ATATTGTGTT CGGGGGATGG GATATCAGCA ACTTGAACCT GGCTGATGCC ATGGCCAGGG CCAAGGTGTT TGACATCGAC
CTGCAGAAAC AGTTGAGGCC TTACATGGAA TCCATGACTC CACTCCCTGG AATCTTTGAT CCCGATTTCA TTGCTGCCAA
CCAAGGAGAC CGTGCCAACA ACGTCATCAA GGGCACAAAG AAAGAACAAG TGCAACAAAT CATCAAAGAC ATTAAGGAGT
TTAAGGAAAA GAGCAAGGTT GACAAGGTGG TTGTGCTCTG GACAGCCAAC ACAGAGAGGT ACAGCAACGT AGTTGTGGGA
TTAAACGACA CCGAGGAAAA CCTCTTGGCT TCCTTGGACA GGAACGAGGC TGAGATTTCC CCTTCCACCT TGTATGCCAT
TGCTTGTGTC ATGGAAAATG TTCCCTTCAT AAATGGAAGC CCTCAGAACA CCTTTGTCCC AGGGCTGATT GATCTGGCCA
TCAGGAGGAA CAGTTTGATT GGAGGAGATG ACTTTAAGAG TGGTCAGACC AAAATGAAAT CTGTGTTGGT GGATTTCCTT
GTGGGGGCAG GCATCAAGCC AACATCAATA GTGAGTTACA ACCATCTGGG AAACAATGAT GGTATGAATC TTTCAGCCCC
TCAAACTTTC CGCTCCAAGG AAATTTCCAA GAGCAATGTT GTTGACGACA TGGTCAACAG CAACGCCATC CTCTATGAAC
CTGGCGAACA TCCTGACCAT GTTGTTGTTA TTAAGTACGT GCCTTACGTT GCGGATAGCA AGAGGGCGAT GGATGAGTAC
ACTTCAGAGA TATTCATGGG TGGAAAGAAC ACAATAGTGT TACACAACAC CTGTGAGGAT TCACTGTTAG CTGCTCCTAT
TATCTTGGAC CTGGTTCTTC TTGCTGAGCT TAGCACTCGA ATCCAATTTA AAGCTGAAAA TGAGGGCAAG TTTCACTCAT
TCCACCCCGT TGCCACCATC CTCAGTTACT TGACCAAGGC CCCTCTTGTA AGTTTAAATT CTCTATCTAT ACATAATATG
AAATTTTGGA AGGTTGCAAA ACTAATTATT GTGGTGGCAA CAACACAGGT TCCACCTGGT ACCCCAGTGG TGAATGCATT
ATCAAAGCAG AGAGCTATGC TGGAAAATAT CATGAGGGCT TGTGTTGGAT TAGCTCCCGA GAACAACATG ATCCTGGAGT
ACAAGTGAAG TAGGAATGAG AGAGCTACGA TTTGGGGATA GTTTGGTTAA ATGTGCCTAT AACTGAACTT ATATCCCATA
CCCTCTTTTT CTGATATCTA TTGCAAAATG TGAATTTAAA GATCGTACAT CTCTGTGTCT TTGTTCCTGT GTCTTTGTTC
CTGCGACTCA TTTGAGAGCA GGCTATCTAT GCATGTAAAA TAATACAAGT TATTCAAGTG TCTCGTGCTT AATTCACTTT
TCTATTACCT TTTTCTATTA TCTGTGTTTG GAAGCGTTGG CACAGAACCT CTCTTGGAAC TGATAACTTA GTGTTAACTT
CTAGGACTGG TTAGGACCAC ACATCACATG AACAAACATA TTCTAAGAAT CACTCACAGT TCTTCATAAA AGGTAATGGC
AATTATTGAG TATATTTGGA ATACAAACAT TTAAACCAGA GATACTTGAT CCATCTGCAT CTGGACCTGA TATTGAAAGT
TGTGAATCAG TAACATGATT CTTATATTTG TATTA

>Vigan.01G084200.01
ATGTTTATCC AGAGTTTTAA GGTGGAGAGT CCCAACGTGA AATACACAGA GAGTGAGATT GAGTCTGTGT ATAACTACGA
AACCACTGAA CTTGTTCACG AGAACAAGAA TGGCAGTTAT CAGTGGGTTG TGAAGCCTAA AACTGTGAAA TATGAATTCA
AAACAAACAC CGATGTGCCT AAACTAGGGG TAATGCTTGT TGGTTGGGGT GGAAACAATG GCTCAACGCT CACCGGTGGT
GTTATTGCTA ACAGAGAGGG TATATCATGG GCAACAAAGG ACAAGATTCA ACAGGCCAAT TACTTTGGGT CTCTGACCCA
GGCATCAGCT ATCAGAGTAG GGTCTTTCCA AGGAGAGGAA ATATATGCTC CTTTCAAGAG TCTGCTTCCA ATGGTAAACC
CTGATGATAT TGTGTTCGGG GGATGGGATA TCAGCAACTT GAACCTGGCT GATGCCATGG CCAGGGCCAA GGTGTTTGAC
ATCGACCTGC AGAAACAGTT GAGGCCTTAC ATGGAATCCA TGACTCCACT CCCTGGAATC TTTGATCCCG ATTTCATTGC
TGCCAACCAA GGAGACCGTG CCAACAACGT CATCAAGGGC ACAAAGAAAG AACAAGTGCA ACAAATCATC AAAGACATTA
AGGAGTTTAA GGAAAAGAGC AAGGTTGACA AGGTGGTTGT GCTCTGGACA GCCAACACAG AGAGGTACAG CAACGTAGTT
GTGGGATTAA ACGACACCGA GGAAAACCTC TTGGCTTCCT TGGACAGGAA CGAGGCTGAG ATTTCCCCTT CCACCTTGTA
TGCCATTGCT TGTGTCATGG AAAATGTTCC CTTCATAAAT GGAAGCCCTC AGAACACCTT TGTCCCAGGG CTGATTGATC
TGGCCATCAG GAGGAACAGT TTGATTGGAG GAGATGACTT TAAGAGTGGT CAGACCAAAA TGAAATCTGT GTTGGTGGAT
TTCCTTGTGG GGGCAGGCAT CAAGCCAACA TCAATAGTGA GTTACAACCA TCTGGGAAAC AATGATGGTA TGAATCTTTC
AGCCCCTCAA ACTTTCCGCT CCAAGGAAAT TTCCAAGAGC AATGTTGTTG ACGACATGGT CAACAGCAAC GCCATCCTCT
ATGAACCTGG CGAACATCCT GACCATGTTG TTGTTATTAA GTACGTGCCT TACGTTGCGG ATAGCAAGAG GGCGATGGAT
GAGTACACTT CAGAGATATT CATGGGTGGA AAGAACACAA TAGTGTTACA CAACACCTGT GAGGATTCAC TGTTAGCTGC
TCCTATTATC TTGGACCTGG TTCTTCTTGC TGAGCTTAGC ACTCGAATCC AATTTAAAGC TGAAAATGAG GGCAAGTTTC
ACTCATTCCA CCCCGTTGCC ACCATCCTCA GTTACTTGAC CAAGGCCCCT CTTGTAAGTT TAAATTCTCT ATCTATACAT
AATATGAAAT TTTGGAAGGT TGCAAAACTA ATTATTGTGG TGGCAACAAC ACAGGTTCCA CCTGGTACCC CAGTGGTGAA
TGCATTATCA AAGCAGAGAG CTATGCTGGA AAATATCATG AGGGCTTGTG TTGGATTAGC TCCCGAGAAC AACATGATCC
TGGAGTACAA GTGA

>Vigan.01G084200.01
MFIQSFKVES PNVKYTESEI ESVYNYETTE LVHENKNGSY QWVVKPKTVK YEFKTNTDVP KLGVMLVGWG GNNGSTLTGG
VIANREGISW ATKDKIQQAN YFGSLTQASA IRVGSFQGEE IYAPFKSLLP MVNPDDIVFG GWDISNLNLA DAMARAKVFD
IDLQKQLRPY MESMTPLPGI FDPDFIAANQ GDRANNVIKG TKKEQVQQII KDIKEFKEKS KVDKVVVLWT ANTERYSNVV
VGLNDTEENL LASLDRNEAE ISPSTLYAIA CVMENVPFIN GSPQNTFVPG LIDLAIRRNS LIGGDDFKSG QTKMKSVLVD
FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVNSN AILYEPGEHP DHVVVIKYVP YVADSKRAMD
EYTSEIFMGG KNTIVLHNTC EDSLLAAPII LDLVLLAELS TRIQFKAENE GKFHSFHPVA TILSYLTKAP LVSLNSLSIH
NMKFWKVAKL IIVVATTQVP PGTPVVNALS KQRAMLENIM RACVGLAPEN NMILEYK*