GBrowse Details

Vigan.01G084200.01

Basic Information:
Name: Vigan.01G084200.01
Multiple alignment
Variant Information
Position: Chr01:6891360..6895344 (- strand)
Length: 3985
Functional Information:
Description: Similar to Myo-inositol-1-phosphate synthase. [Q2MJR4, Glycine max]
GO: Biological Process: inositol biosynthetic process (GO:0006021)
Biological Process: phospholipid biosynthetic process (GO:0008654)
Molecular Function: inositol-3-phosphate synthase activity (GO:0004512)
InterPro: Myo-inositol-1-phosphate synthase (IPR002587)
Myo-inositol-1-phosphate synthase, GAPDH-like (IPR013021)
NAD(P)-binding domain (IPR016040)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.41,0.70,177.04,124.14,65.43,12.81,9.22,661.78
Arabidopsis thaliana homolog: AT2G22240.1, AT4G39800.1, AT5G10170.1
Automatic updates:
Name: NM_001279023 NCBI(nuccore)
Organism: Cicer arietinum
Description: Cicer arietinum inositol-3-phosphate synthase-like (LOC101499706), mRNA.
PubMed ID: 23065054 NCBI(pubmed)
18721262 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr01:6891360..6891866 (- strand)
Length: 507
Type: three_prime_UTR
Position: Chr01:6891867..6892130 (- strand)
Length: 264
Type: CDS
Position: Chr01:6892214..6892402 (- strand)
Length: 189
Type: CDS
Position: Chr01:6892489..6892665 (- strand)
Length: 177
Type: CDS
Position: Chr01:6892872..6892987 (- strand)
Length: 116
Type: CDS
Position: Chr01:6893090..6893316 (- strand)
Length: 227
Type: CDS
Position: Chr01:6893454..6893701 (- strand)
Length: 248
Type: CDS
Position: Chr01:6894703..6894838 (- strand)
Length: 136
Type: CDS
Position: Chr01:6894918..6894986 (- strand)
Length: 69
Type: CDS
Position: Chr01:6895083..6895270 (- strand)
Length: 188
Type: CDS
Position: Chr01:6895271..6895344 (- strand)
Length: 74
Type: five_prime_UTR


>Vigan.01G084200.01
CTGCACACAA CCATCCATCT TCTTCTTCTT CTTCCTTAAG AGAGTTTTTC TTTTTACCTT TGGAAGCAAG AAAAATGTTT
ATCCAGAGTT TTAAGGTGGA GAGTCCCAAC GTGAAATACA CAGAGAGTGA GATTGAGTCT GTGTATAACT ACGAAACCAC
TGAACTTGTT CACGAGAACA AGAATGGCAG TTATCAGTGG GTTGTGAAGC CTAAAACTGT GAAATATGAA TTCAAAACAA
ACACCGATGT GCCTAAACTA GGGGTAATGC TTGTTGGTTG GGGTGGAAAC AATGGCTCAA CGCTCACCGG TGGTGTTATT
GCTAACAGAG AGGGTATATC ATGGGCAACA AAGGACAAGA TTCAACAGGC CAATTACTTT GGGTCTCTGA CCCAGGCATC
AGCTATCAGA GTAGGGTCTT TCCAAGGAGA GGAAATATAT GCTCCTTTCA AGAGTCTGCT TCCAATGGTA AACCCTGATG
ATATTGTGTT CGGGGGATGG GATATCAGCA ACTTGAACCT GGCTGATGCC ATGGCCAGGG CCAAGGTGTT TGACATCGAC
CTGCAGAAAC AGTTGAGGCC TTACATGGAA TCCATGACTC CACTCCCTGG AATCTTTGAT CCCGATTTCA TTGCTGCCAA
CCAAGGAGAC CGTGCCAACA ACGTCATCAA GGGCACAAAG AAAGAACAAG TGCAACAAAT CATCAAAGAC ATTAAGGAGT
TTAAGGAAAA GAGCAAGGTT GACAAGGTGG TTGTGCTCTG GACAGCCAAC ACAGAGAGGT ACAGCAACGT AGTTGTGGGA
TTAAACGACA CCGAGGAAAA CCTCTTGGCT TCCTTGGACA GGAACGAGGC TGAGATTTCC CCTTCCACCT TGTATGCCAT
TGCTTGTGTC ATGGAAAATG TTCCCTTCAT AAATGGAAGC CCTCAGAACA CCTTTGTCCC AGGGCTGATT GATCTGGCCA
TCAGGAGGAA CAGTTTGATT GGAGGAGATG ACTTTAAGAG TGGTCAGACC AAAATGAAAT CTGTGTTGGT GGATTTCCTT
GTGGGGGCAG GCATCAAGCC AACATCAATA GTGAGTTACA ACCATCTGGG AAACAATGAT GGTATGAATC TTTCAGCCCC
TCAAACTTTC CGCTCCAAGG AAATTTCCAA GAGCAATGTT GTTGACGACA TGGTCAACAG CAACGCCATC CTCTATGAAC
CTGGCGAACA TCCTGACCAT GTTGTTGTTA TTAAGTACGT GCCTTACGTT GCGGATAGCA AGAGGGCGAT GGATGAGTAC
ACTTCAGAGA TATTCATGGG TGGAAAGAAC ACAATAGTGT TACACAACAC CTGTGAGGAT TCACTGTTAG CTGCTCCTAT
TATCTTGGAC CTGGTTCTTC TTGCTGAGCT TAGCACTCGA ATCCAATTTA AAGCTGAAAA TGAGGGCAAG TTTCACTCAT
TCCACCCCGT TGCCACCATC CTCAGTTACT TGACCAAGGC CCCTCTTGTA AGTTTAAATT CTCTATCTAT ACATAATATG
AAATTTTGGA AGGTTGCAAA ACTAATTATT GTGGTGGCAA CAACACAGGT TCCACCTGGT ACCCCAGTGG TGAATGCATT
ATCAAAGCAG AGAGCTATGC TGGAAAATAT CATGAGGGCT TGTGTTGGAT TAGCTCCCGA GAACAACATG ATCCTGGAGT
ACAAGTGAAG TAGGAATGAG AGAGCTACGA TTTGGGGATA GTTTGGTTAA ATGTGCCTAT AACTGAACTT ATATCCCATA
CCCTCTTTTT CTGATATCTA TTGCAAAATG TGAATTTAAA GATCGTACAT CTCTGTGTCT TTGTTCCTGT GTCTTTGTTC
CTGCGACTCA TTTGAGAGCA GGCTATCTAT GCATGTAAAA TAATACAAGT TATTCAAGTG TCTCGTGCTT AATTCACTTT
TCTATTACCT TTTTCTATTA TCTGTGTTTG GAAGCGTTGG CACAGAACCT CTCTTGGAAC TGATAACTTA GTGTTAACTT
CTAGGACTGG TTAGGACCAC ACATCACATG AACAAACATA TTCTAAGAAT CACTCACAGT TCTTCATAAA AGGTAATGGC
AATTATTGAG TATATTTGGA ATACAAACAT TTAAACCAGA GATACTTGAT CCATCTGCAT CTGGACCTGA TATTGAAAGT
TGTGAATCAG TAACATGATT CTTATATTTG TATTA

>Vigan.01G084200.01
ATGTTTATCC AGAGTTTTAA GGTGGAGAGT CCCAACGTGA AATACACAGA GAGTGAGATT GAGTCTGTGT ATAACTACGA
AACCACTGAA CTTGTTCACG AGAACAAGAA TGGCAGTTAT CAGTGGGTTG TGAAGCCTAA AACTGTGAAA TATGAATTCA
AAACAAACAC CGATGTGCCT AAACTAGGGG TAATGCTTGT TGGTTGGGGT GGAAACAATG GCTCAACGCT CACCGGTGGT
GTTATTGCTA ACAGAGAGGG TATATCATGG GCAACAAAGG ACAAGATTCA ACAGGCCAAT TACTTTGGGT CTCTGACCCA
GGCATCAGCT ATCAGAGTAG GGTCTTTCCA AGGAGAGGAA ATATATGCTC CTTTCAAGAG TCTGCTTCCA ATGGTAAACC
CTGATGATAT TGTGTTCGGG GGATGGGATA TCAGCAACTT GAACCTGGCT GATGCCATGG CCAGGGCCAA GGTGTTTGAC
ATCGACCTGC AGAAACAGTT GAGGCCTTAC ATGGAATCCA TGACTCCACT CCCTGGAATC TTTGATCCCG ATTTCATTGC
TGCCAACCAA GGAGACCGTG CCAACAACGT CATCAAGGGC ACAAAGAAAG AACAAGTGCA ACAAATCATC AAAGACATTA
AGGAGTTTAA GGAAAAGAGC AAGGTTGACA AGGTGGTTGT GCTCTGGACA GCCAACACAG AGAGGTACAG CAACGTAGTT
GTGGGATTAA ACGACACCGA GGAAAACCTC TTGGCTTCCT TGGACAGGAA CGAGGCTGAG ATTTCCCCTT CCACCTTGTA
TGCCATTGCT TGTGTCATGG AAAATGTTCC CTTCATAAAT GGAAGCCCTC AGAACACCTT TGTCCCAGGG CTGATTGATC
TGGCCATCAG GAGGAACAGT TTGATTGGAG GAGATGACTT TAAGAGTGGT CAGACCAAAA TGAAATCTGT GTTGGTGGAT
TTCCTTGTGG GGGCAGGCAT CAAGCCAACA TCAATAGTGA GTTACAACCA TCTGGGAAAC AATGATGGTA TGAATCTTTC
AGCCCCTCAA ACTTTCCGCT CCAAGGAAAT TTCCAAGAGC AATGTTGTTG ACGACATGGT CAACAGCAAC GCCATCCTCT
ATGAACCTGG CGAACATCCT GACCATGTTG TTGTTATTAA GTACGTGCCT TACGTTGCGG ATAGCAAGAG GGCGATGGAT
GAGTACACTT CAGAGATATT CATGGGTGGA AAGAACACAA TAGTGTTACA CAACACCTGT GAGGATTCAC TGTTAGCTGC
TCCTATTATC TTGGACCTGG TTCTTCTTGC TGAGCTTAGC ACTCGAATCC AATTTAAAGC TGAAAATGAG GGCAAGTTTC
ACTCATTCCA CCCCGTTGCC ACCATCCTCA GTTACTTGAC CAAGGCCCCT CTTGTAAGTT TAAATTCTCT ATCTATACAT
AATATGAAAT TTTGGAAGGT TGCAAAACTA ATTATTGTGG TGGCAACAAC ACAGGTTCCA CCTGGTACCC CAGTGGTGAA
TGCATTATCA AAGCAGAGAG CTATGCTGGA AAATATCATG AGGGCTTGTG TTGGATTAGC TCCCGAGAAC AACATGATCC
TGGAGTACAA GTGA

>Vigan.01G084200.01
MFIQSFKVES PNVKYTESEI ESVYNYETTE LVHENKNGSY QWVVKPKTVK YEFKTNTDVP KLGVMLVGWG GNNGSTLTGG
VIANREGISW ATKDKIQQAN YFGSLTQASA IRVGSFQGEE IYAPFKSLLP MVNPDDIVFG GWDISNLNLA DAMARAKVFD
IDLQKQLRPY MESMTPLPGI FDPDFIAANQ GDRANNVIKG TKKEQVQQII KDIKEFKEKS KVDKVVVLWT ANTERYSNVV
VGLNDTEENL LASLDRNEAE ISPSTLYAIA CVMENVPFIN GSPQNTFVPG LIDLAIRRNS LIGGDDFKSG QTKMKSVLVD
FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVNSN AILYEPGEHP DHVVVIKYVP YVADSKRAMD
EYTSEIFMGG KNTIVLHNTC EDSLLAAPII LDLVLLAELS TRIQFKAENE GKFHSFHPVA TILSYLTKAP LVSLNSLSIH
NMKFWKVAKL IIVVATTQVP PGTPVVNALS KQRAMLENIM RACVGLAPEN NMILEYK*