GBrowse Details

Vigan.01G095300.01

Basic Information:
Name: Vigan.01G095300.01
Multiple alignment
Variant Information
Position: Chr01:8100471..8103628 (+ strand)
Length: 3158
Functional Information:
Description: Similar to Uncharacterized protein. [K7KQR7, Glycine max]
InterPro: X8 (IPR012946)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,1.35,0.10,0.03,0.45,1.44,1.31
Arabidopsis thaliana homolog: AT4G05430.1
Automatic updates:
Name: NM_001255309 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max glucan endo-1,3-beta-glucosidase 13-like (LOC100778330), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:8100471..8100714 (+ strand)
Length: 244
Type: five_prime_UTR
Position: Chr01:8100715..8100769 (+ strand)
Length: 55
Type: CDS
Position: Chr01:8101725..8102063 (+ strand)
Length: 339
Type: CDS
Position: Chr01:8103059..8103089 (+ strand)
Length: 31
Type: CDS
Position: Chr01:8103195..8103297 (+ strand)
Length: 103
Type: CDS
Position: Chr01:8103298..8103628 (+ strand)
Length: 331
Type: three_prime_UTR


>Vigan.01G095300.01
CTCAAATGTA TCCTCATCTG CTCTCTGTCA AAGATAGTAC TACTTGCTTC AGAAGGCTGC ATTCTTCTTC TTCATAAATC
ATTTTAAAAT CACAAAAAAG TGAAAAGGAA AGAAAAGATC AAACGAAATC TTCCTTCAAG TAACCGGTGA TTCCATTGAC
ACTGCTGCTC TTATAGCACC ACTCATTGCA CTCAACCTTT CTTCACCCTC ATTCAGACTC AGAGTACTCA CTAAAACTTC
AGACATGAAA AACAAAATGT GGCTTTATCT GTTCCTTATT TTTATAGAAT GCTATCTGGC CATGGCAAGG GAAATCGTGG
TGCAACAGAA AGCAGATGCT GCTATCCCAG TGACAACAAT GTCACCACCT GAAGGAAACA CTACATTCAT TGATGGCACA
ACTTGGTGTA TGGCTCGTCC TGGTGCTTCT CAAAATGACT TGCAGAATGC TCTTGATTGG GCTTGTGGAC TTGGAATGGC
AAATTGCAAA GCCATCCAAC AAGGTGGACC ATGTTTTGAA CCAGACACAC TTGTTTCTCA TGCTTCCTAC GCTTTCAATA
GCTACTATCA GACAAATGGA AATTCCGATA TTGCATGCAA TTTTGGAGGC ACTGCTGCTT TGACCAAACG TGACCCCAGT
TATGGAAAAT GTGTTTATTC TACATCTGGA TCTTTAGTTG CTTCTGCACC ACCTTTGTTG AAGAAGAATA GCCAAAACCT
GGTTTGGTCG AAACTTGTTG TGGTGTTACT GGTTTCATAC TTTTGGATGT GACTATGGTC GGTGAAACTG TGGACAAAAG
GAAAAGGGAA TTAGAGGAAG GTTAGGGAAT GTAGTTTTGG TAGCATTTAT AATTGTGTTT TTGTTGCTAA GGTATTCTTA
GCTTTCATGT TGGGTCAGAA CAAGAATCTC TAATTGTGCA AATAATCTAT TTTTTTAAGT TTAATCTGTA AATTATTCTA
ACAATTCCAA ATTTATAAGA ACTTCACAAT TTTAAGTTGT TGACGCTAAC CTCCAAATTA TTTACTTAAT ATTATTTTAT
TTCATAAAGT AAGATAAATA CTAATATTTG ATTAAATTGA TCTGTATTTA ATATAATAGT TAA

>Vigan.01G095300.01
ATGAAAAACA AAATGTGGCT TTATCTGTTC CTTATTTTTA TAGAATGCTA TCTGGCCATG GCAAGGGAAA TCGTGGTGCA
ACAGAAAGCA GATGCTGCTA TCCCAGTGAC AACAATGTCA CCACCTGAAG GAAACACTAC ATTCATTGAT GGCACAACTT
GGTGTATGGC TCGTCCTGGT GCTTCTCAAA ATGACTTGCA GAATGCTCTT GATTGGGCTT GTGGACTTGG AATGGCAAAT
TGCAAAGCCA TCCAACAAGG TGGACCATGT TTTGAACCAG ACACACTTGT TTCTCATGCT TCCTACGCTT TCAATAGCTA
CTATCAGACA AATGGAAATT CCGATATTGC ATGCAATTTT GGAGGCACTG CTGCTTTGAC CAAACGTGAC CCCAGTTATG
GAAAATGTGT TTATTCTACA TCTGGATCTT TAGTTGCTTC TGCACCACCT TTGTTGAAGA AGAATAGCCA AAACCTGGTT
TGGTCGAAAC TTGTTGTGGT GTTACTGGTT TCATACTTTT GGATGTGA

>Vigan.01G095300.01
MKNKMWLYLF LIFIECYLAM AREIVVQQKA DAAIPVTTMS PPEGNTTFID GTTWCMARPG ASQNDLQNAL DWACGLGMAN
CKAIQQGGPC FEPDTLVSHA SYAFNSYYQT NGNSDIACNF GGTAALTKRD PSYGKCVYST SGSLVASAPP LLKKNSQNLV
WSKLVVVLLV SYFWM*