GBrowse Details

Vigan.01G126300.01

Basic Information:
Name: Vigan.01G126300.01
Multiple alignment
Variant Information
Position: Chr01:12510284..12512945 (- strand)
Length: 2662
Functional Information:
Description: Similar to Monothiol glutaredoxin-S17-like protein. [V5N8A7, Phaseolus vulgaris]
GO: Biological Process: cell redox homeostasis (GO:0045454)
Molecular Function: electron carrier activity (GO:0009055)
Molecular Function: protein disulfide oxidoreductase activity (GO:0015035)
InterPro: Glutaredoxin (IPR002109)
Monothiol glutaredoxin-related (IPR004480)
Thioredoxin-like fold (IPR012336)
Thioredoxin domain (IPR013766)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:77.69,77.66,40.80,36.35,57.58,117.51,44.81,42.64
Arabidopsis thaliana homolog: AT4G04950.1
Automatic updates:
Name: BT093120 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-21O16 unknown mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001354892 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max thioredoxin family protein (LOC100784787), mRNA.
PubMed ID: 18927222 NCBI(pubmed)
Status: Known Variant
Name: NM_001417841 NCBI(nuccore)
Organism: Medicago truncatula
Description: Medicago truncatula monothiol glutaredoxin-S17 (LOC25493175), mRNA.
PubMed ID: 31837401 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr01:12510284..12510629 (- strand)
Length: 346
Type: three_prime_UTR
Position: Chr01:12510630..12511847 (- strand)
Length: 1218
Type: CDS
Position: Chr01:12512510..12512584 (- strand)
Length: 75
Type: CDS
Position: Chr01:12512660..12512830 (- strand)
Length: 171
Type: CDS
Position: Chr01:12512831..12512945 (- strand)
Length: 115
Type: five_prime_UTR


>Vigan.01G126300.01
AAGGTAGTTT ATCTTATTTA GTAATTTTTC ATTTTCACAC GCAGAACACT GCACAGTGTT GATCTGGAAA CAGGGCTACG
ATTAGGGTTT GTAGGGTTTG CGTGATCGAA TCAGAATGGG TGGATCGGTG AAGGACGTGA AGTCCAAGGC GGAGGTTGAT
GCGGTGGTGG GTGGTGGCTC TCCGGTTGTC CTCCACTTTT GGGCGTCGTG GTGCGAAGCT TCTAAGCACA TGGATCAACT
CTTCACTCAC TTGGCCACTG ATTTCCCCAA AGCCCATTTC TTAAGGGTTG AAGCCGAAGA GCAACCTGAG ATATCCGAGG
CGTACTCCGT CTCTGCCGTT CCTTTCTTTG TCTTTTGTAA GGATGGCAAG ACCTTTGATA CATTGGAGGG AGCTGATCCG
TCAAGCTTAG CCAATAAGGT TGCCAAACTT GCAGGCTCAA TTAACCCTGG AGAGGCTGCT TCTCCTGCCA GTCTCGGGAT
GGCTGCTGGA TCTGCCGTTC TTGAAGCCGT GAAAGATTTA GCTCAAGTAG ATGCATCAAA GGAGAAAAAT CTAGTTGAAC
CAGGGCTTAG TGGTTCTCTT AAGAAGCGAT TGCAGCAACT CGTTGATTCT CATCCTGTTT TCCTTTTCAT GAAAGGAACC
CCTGAAGAGC CAAAGTGTAA ATTTAGCAGG AAAGTTGTTG AAGTGTTGAA GGAAGAAAAA GTCAAGTTTG GAAGTTTTGA
TGTCATGTCA GATTCAGAGC TTCGTGAAGG CTTGAAGAAG TTTTCAAATT GGCCAACATT TCCTCAGCTT TACTGTAAAG
GTGAGCTTCT TGGTGGGTGT GACATAGCAG TTGCTATGCA TGAGAATGGG GAATTGCGAG AAGTTTTTAA AGATCAAGGA
ATTGATACCA TTGATGAAGA AAAAGAATCA GGAGATGCCA AAGGCGGGAT ATCTAAATCT ACTAATTTGA GTACTGGCTT
ATCATCTCGA CTGGAAAGTC TGATAAATTC TAATGCAGTT ATGCTCTTTA TGAAGGGAAA ACCAGATGAA CCAAAGTGTG
GTTTCAGTAG GAAGGTTGTT GAAATTCTCC AGCAAGAGAG CGTACCCTTT GACAGCTTTG ACATTCTTAC TGATGAAGAA
GTCCGTCAAG GGCTTAAGGT TTATTCAAAC TGGTCCAGTT ATCCTCAGCT GTATATCAAA GGAGAGCTTA TTGGGGGATC
AGACATTGTG TTGGAGATGC ATAAAAGCGG AGAACTTAAG AAAAGTTTAC AGGAGAAAGG GATTCTTCCT GCAGAGAGCA
TTCATGATCG ACTGAAGAAA TTGATTGCCT CATCCCCTGT GATGCTCTTC ATGAAGGGTA CCCCAGATGT ACCAAGATGT
GGTTTTAGTT CCAGAGTTGT TGATGCCCTT CGACAGGAGG GCCTGAATTT TGGGTTTTTT GATATATTAA GTGATGAGGA
TGTGAGACAG GGATTGAAGG TATACTCAAA TTGGCCAACC TATCCTCAGC TCTACTACAA AAGTGAGCTG ATTGGTGGTC
ACGACATTGT GATGGAGCTG AGAAATAATG GGGAGCTGAA GTCGACCTTA TCTGAGTAGG ATTATTATGA ATCCATTCTG
GTTGTGTATT GGTATTTAGA ACAAGTGTGA TTGACAATCA TATATGGCGA TTTTGATCCT GGTGTCAGGA ATGTGTTTGA
TATCATTGTA ACAATCTAGA TGGTTACTTT TATATACGTC GTCAGTGATT ATGAATGCTA GTTTTCTGTC CTGTTGAAAA
TTTTCAACCT TTTATATACT TTTGTCTGTG ATTCTGAATG CTAGTTTTAT CTCCGGTGGA AAATTTTAAT CCTTTGGAAT
TCAAATTGAA TACCAACTGT TGTAAACCTC AGTTTGGTGC TGGCGAAGAT GCTAACTCAG GAAGTTACTT GCCTGTTATA
TTTAA

>Vigan.01G126300.01
ATGGGTGGAT CGGTGAAGGA CGTGAAGTCC AAGGCGGAGG TTGATGCGGT GGTGGGTGGT GGCTCTCCGG TTGTCCTCCA
CTTTTGGGCG TCGTGGTGCG AAGCTTCTAA GCACATGGAT CAACTCTTCA CTCACTTGGC CACTGATTTC CCCAAAGCCC
ATTTCTTAAG GGTTGAAGCC GAAGAGCAAC CTGAGATATC CGAGGCGTAC TCCGTCTCTG CCGTTCCTTT CTTTGTCTTT
TGTAAGGATG GCAAGACCTT TGATACATTG GAGGGAGCTG ATCCGTCAAG CTTAGCCAAT AAGGTTGCCA AACTTGCAGG
CTCAATTAAC CCTGGAGAGG CTGCTTCTCC TGCCAGTCTC GGGATGGCTG CTGGATCTGC CGTTCTTGAA GCCGTGAAAG
ATTTAGCTCA AGTAGATGCA TCAAAGGAGA AAAATCTAGT TGAACCAGGG CTTAGTGGTT CTCTTAAGAA GCGATTGCAG
CAACTCGTTG ATTCTCATCC TGTTTTCCTT TTCATGAAAG GAACCCCTGA AGAGCCAAAG TGTAAATTTA GCAGGAAAGT
TGTTGAAGTG TTGAAGGAAG AAAAAGTCAA GTTTGGAAGT TTTGATGTCA TGTCAGATTC AGAGCTTCGT GAAGGCTTGA
AGAAGTTTTC AAATTGGCCA ACATTTCCTC AGCTTTACTG TAAAGGTGAG CTTCTTGGTG GGTGTGACAT AGCAGTTGCT
ATGCATGAGA ATGGGGAATT GCGAGAAGTT TTTAAAGATC AAGGAATTGA TACCATTGAT GAAGAAAAAG AATCAGGAGA
TGCCAAAGGC GGGATATCTA AATCTACTAA TTTGAGTACT GGCTTATCAT CTCGACTGGA AAGTCTGATA AATTCTAATG
CAGTTATGCT CTTTATGAAG GGAAAACCAG ATGAACCAAA GTGTGGTTTC AGTAGGAAGG TTGTTGAAAT TCTCCAGCAA
GAGAGCGTAC CCTTTGACAG CTTTGACATT CTTACTGATG AAGAAGTCCG TCAAGGGCTT AAGGTTTATT CAAACTGGTC
CAGTTATCCT CAGCTGTATA TCAAAGGAGA GCTTATTGGG GGATCAGACA TTGTGTTGGA GATGCATAAA AGCGGAGAAC
TTAAGAAAAG TTTACAGGAG AAAGGGATTC TTCCTGCAGA GAGCATTCAT GATCGACTGA AGAAATTGAT TGCCTCATCC
CCTGTGATGC TCTTCATGAA GGGTACCCCA GATGTACCAA GATGTGGTTT TAGTTCCAGA GTTGTTGATG CCCTTCGACA
GGAGGGCCTG AATTTTGGGT TTTTTGATAT ATTAAGTGAT GAGGATGTGA GACAGGGATT GAAGGTATAC TCAAATTGGC
CAACCTATCC TCAGCTCTAC TACAAAAGTG AGCTGATTGG TGGTCACGAC ATTGTGATGG AGCTGAGAAA TAATGGGGAG
CTGAAGTCGA CCTTATCTGA GTAG

>Vigan.01G126300.01
MGGSVKDVKS KAEVDAVVGG GSPVVLHFWA SWCEASKHMD QLFTHLATDF PKAHFLRVEA EEQPEISEAY SVSAVPFFVF
CKDGKTFDTL EGADPSSLAN KVAKLAGSIN PGEAASPASL GMAAGSAVLE AVKDLAQVDA SKEKNLVEPG LSGSLKKRLQ
QLVDSHPVFL FMKGTPEEPK CKFSRKVVEV LKEEKVKFGS FDVMSDSELR EGLKKFSNWP TFPQLYCKGE LLGGCDIAVA
MHENGELREV FKDQGIDTID EEKESGDAKG GISKSTNLST GLSSRLESLI NSNAVMLFMK GKPDEPKCGF SRKVVEILQQ
ESVPFDSFDI LTDEEVRQGL KVYSNWSSYP QLYIKGELIG GSDIVLEMHK SGELKKSLQE KGILPAESIH DRLKKLIASS
PVMLFMKGTP DVPRCGFSSR VVDALRQEGL NFGFFDILSD EDVRQGLKVY SNWPTYPQLY YKSELIGGHD IVMELRNNGE
LKSTLSE*