GBrowse Details

Vigan.01G139300.01

Basic Information:
Name: Vigan.01G139300.01
Multiple alignment
Variant Information
Position: Chr01:14377535..14382837 (- strand)
Length: 5303
Functional Information:
Description: Similar to Sulfite exporter TauE/SafE family protein, putative. [XP_007025919.1, Theobroma cacao]
GO: Cellular Component: integral to membrane (GO:0016021)
InterPro: Transmembrane protein TauE like (IPR002781)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:11.94,2.97,7.73,3.57,4.55,13.50,2.33,10.68
Arabidopsis thaliana homolog: AT1G61740.1
Automatic updates:
Name: NM_001255720 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max YfcA domain-containing protein (LOC100803518), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:14377535..14378112 (- strand)
Length: 578
Type: three_prime_UTR
Position: Chr01:14378113..14378421 (- strand)
Length: 309
Type: CDS
Position: Chr01:14378813..14378959 (- strand)
Length: 147
Type: CDS
Position: Chr01:14379043..14379177 (- strand)
Length: 135
Type: CDS
Position: Chr01:14381759..14382715 (- strand)
Length: 957
Type: CDS
Position: Chr01:14382716..14382837 (- strand)
Length: 122
Type: five_prime_UTR


>Vigan.01G139300.01
CGAAATTATG TTACAACAGT AAAGAAGCCA ACAGCCCTGT TAAGATTGGC CTCAACATGT CACTGTAATC CTTAAAGAAT
CTGAATTTTG TTATGTGAGA CATTTTCATC TCATTGTGTT GTATGATCCT ATTTGCTTTT GCTTATTTTC AAAAGGTTTT
GTTACCGTTC TCTCTGTATC CTTATATAAA GGCATTGCAC ATTCAGTTAT TCAATCAAAC ACCTTGCAGT TTTCTTCAAG
TTCTCAAACG AATGCAGATT TTTCACAGCC TCACATTTTT TGTTCTTACC TTCATCTCCT TCAATCCTTG TAATGCAGAA
CAAGCACAGA CTATTCTAGA CGCCCTTGGC AGTAACCATT TCTTAGAGAA AATATATGAA TGGGGAAATG GTGCACAAGG
ATTCCAAGAA GCTCAGATTG AATTTTCAGG TCCTATAGTG CTGGCAGGAG TGTTGTGCTT CATTGCTTCT TCTATATCCA
GTGCTGGTGG CATTGGTGGT GGTGGCCTTT TCATTCCCAT ATTGACTATT GTGGCTGGCC TGGACCTCAA AATAGCTTCA
AGTTTGTCAG CTTTCATGGT CACAGGAGGG TCGGTTGCAA ATGTCTTGTG CAATCTTTGT GCCACAAGCC CTAAATTTGG
TGGCAAGTCA TTGATTGACT ATGACATAGC ACTTTTGTCA GAACCATGTA TGCTGCTAGG AGTGAGTGTT GGAGTCATAT
GCAACCTTGT ATTCCCAGAA TGGTTGATTA CTATGTTGTT TGCTGTCTTT CTCACTTGGT CTACCTCAAA GACCTGCAAC
AGTGGAGTGG TATTTTGGAA GATTGAATCA GAAGAAAGGA GGAAAAAGCA TGGATTTGAG GGGCTTGAAA ACAGACTATT
AGAAAATGGG AATGAAGTAA GGGAAGGGGG AGTGCAGGTG AACAAAGAAA AAGAAGAGAT GAAAAGTGTT GAAGAACAGG
TTGTGGTTCC TGAAGAAAAT ATCAGGGTGA AAATCCCTTG GCTGAAATTG GTGGTCTTAC TCTTGGTCTG GTTCACTTTC
TTCTCCCTTT ATCTTCTTCG TGGCAATAAA TATGGACAGA GTATCATTCC AATGGAACCA TGTGGTGTGG GATACTGGAT
TCTTTCATCA GCTCAACTCC CTCTTGCCTT GTTTTTCACT GCGTGGATTG TGTACAGAAA AGATAGCCAT CAAGATGAAA
ATCTCATGAC CGAGGACCCA TGCCTATCCT CAAGAGGACC CTCAAACAAG CTTATATTTC CAATAATGGC ATTGCTAGCA
GGGATATTGG GTGGTGTCTT TGGAATTGGT GGTGGAATGC TGATAAGTCC ACTTCTTCTG CATGTTGGAA TAGCTCCTGA
GGTGACAGCA GCAACATGTT CTTTCATGGT TTTCTTCTCA TCTACCATGT CAGCATTGCA GTACCTATTG TTGGGCATGG
ATCACATAGA GACTGCCCTA ATGTTGGCCA TAGTATGTTT TGTTGCATCA CTTATTGGAT TGTTGGTGGT GCAGAGAGCA
ATTCAAAGCT ATGGAAGACC ATCCATAATA GTATTTTCGG TTAGCATAGT GATGACTTTA AGTGTTGTTC TAATGACTAG
CTTTGGGATG ATTCGAACTT GGAAAGACTA TGTATCAGGG AGATACATGG GATTCAAACT ACCATGTTGA AAAACCCAAT
TTTGTTCTAT TAGTATCTCA CTCTGTCACT GAATCAGCTA CAACTTTTTG ACCTTTTGTA TTAATGCAGC AAGACACTTT
ACTAAGGAAG ACTAGCATTT TTTGATGATA TGATATTTTC GGATGAAGAA CATGCGACAA CTTCCCAGAA AAACATAAAT
AAAAGTTGTC ATCATTGTTG AAAGAAATTC TCTTTACATA TTTTGTCACA AATAAGAACC TAACAAGTGT TGGTTGAAGA
AAGGATTGAA GACCCTTCAC CTGTGGTCTT GGTTCCATGA CGAGGTTTTT ATGTTACAAG GACAAAATAC AGTTCAAAAG
AGTCTCTCTT TCGTGCCTAA CAGTTCCTTT AAAGAGTTAG AACACCAAAA CGTAAGAAAA TTGATGAAAT TGAAGATCTA
GCTTTCAATT TTCAATGTTC TCTTTTACTG GAATTATCAA AAAGTGAAAG ATGTATTATC TAAAGAATTA ACTCTAAATT
TTTACTCACA TTTGTGTATA TAATATAACT GAGGACCATA TTATAAAGCT AAGTAAGAGA GGCACAAAGT TATATGGCTT
TTGTAGTA

>Vigan.01G139300.01
ATGATCCTAT TTGCTTTTGC TTATTTTCAA AAGGTTTTGT TACCGTTCTC TCTGTATCCT TATATAAAGG CATTGCACAT
TCAGTTATTC AATCAAACAC CTTGCAGTTT TCTTCAAGTT CTCAAACGAA TGCAGATTTT TCACAGCCTC ACATTTTTTG
TTCTTACCTT CATCTCCTTC AATCCTTGTA ATGCAGAACA AGCACAGACT ATTCTAGACG CCCTTGGCAG TAACCATTTC
TTAGAGAAAA TATATGAATG GGGAAATGGT GCACAAGGAT TCCAAGAAGC TCAGATTGAA TTTTCAGGTC CTATAGTGCT
GGCAGGAGTG TTGTGCTTCA TTGCTTCTTC TATATCCAGT GCTGGTGGCA TTGGTGGTGG TGGCCTTTTC ATTCCCATAT
TGACTATTGT GGCTGGCCTG GACCTCAAAA TAGCTTCAAG TTTGTCAGCT TTCATGGTCA CAGGAGGGTC GGTTGCAAAT
GTCTTGTGCA ATCTTTGTGC CACAAGCCCT AAATTTGGTG GCAAGTCATT GATTGACTAT GACATAGCAC TTTTGTCAGA
ACCATGTATG CTGCTAGGAG TGAGTGTTGG AGTCATATGC AACCTTGTAT TCCCAGAATG GTTGATTACT ATGTTGTTTG
CTGTCTTTCT CACTTGGTCT ACCTCAAAGA CCTGCAACAG TGGAGTGGTA TTTTGGAAGA TTGAATCAGA AGAAAGGAGG
AAAAAGCATG GATTTGAGGG GCTTGAAAAC AGACTATTAG AAAATGGGAA TGAAGTAAGG GAAGGGGGAG TGCAGGTGAA
CAAAGAAAAA GAAGAGATGA AAAGTGTTGA AGAACAGGTT GTGGTTCCTG AAGAAAATAT CAGGGTGAAA ATCCCTTGGC
TGAAATTGGT GGTCTTACTC TTGGTCTGGT TCACTTTCTT CTCCCTTTAT CTTCTTCGTG GCAATAAATA TGGACAGAGT
ATCATTCCAA TGGAACCATG TGGTGTGGGA TACTGGATTC TTTCATCAGC TCAACTCCCT CTTGCCTTGT TTTTCACTGC
GTGGATTGTG TACAGAAAAG ATAGCCATCA AGATGAAAAT CTCATGACCG AGGACCCATG CCTATCCTCA AGAGGACCCT
CAAACAAGCT TATATTTCCA ATAATGGCAT TGCTAGCAGG GATATTGGGT GGTGTCTTTG GAATTGGTGG TGGAATGCTG
ATAAGTCCAC TTCTTCTGCA TGTTGGAATA GCTCCTGAGG TGACAGCAGC AACATGTTCT TTCATGGTTT TCTTCTCATC
TACCATGTCA GCATTGCAGT ACCTATTGTT GGGCATGGAT CACATAGAGA CTGCCCTAAT GTTGGCCATA GTATGTTTTG
TTGCATCACT TATTGGATTG TTGGTGGTGC AGAGAGCAAT TCAAAGCTAT GGAAGACCAT CCATAATAGT ATTTTCGGTT
AGCATAGTGA TGACTTTAAG TGTTGTTCTA ATGACTAGCT TTGGGATGAT TCGAACTTGG AAAGACTATG TATCAGGGAG
ATACATGGGA TTCAAACTAC CATGTTGA

>Vigan.01G139300.01
MILFAFAYFQ KVLLPFSLYP YIKALHIQLF NQTPCSFLQV LKRMQIFHSL TFFVLTFISF NPCNAEQAQT ILDALGSNHF
LEKIYEWGNG AQGFQEAQIE FSGPIVLAGV LCFIASSISS AGGIGGGGLF IPILTIVAGL DLKIASSLSA FMVTGGSVAN
VLCNLCATSP KFGGKSLIDY DIALLSEPCM LLGVSVGVIC NLVFPEWLIT MLFAVFLTWS TSKTCNSGVV FWKIESEERR
KKHGFEGLEN RLLENGNEVR EGGVQVNKEK EEMKSVEEQV VVPEENIRVK IPWLKLVVLL LVWFTFFSLY LLRGNKYGQS
IIPMEPCGVG YWILSSAQLP LALFFTAWIV YRKDSHQDEN LMTEDPCLSS RGPSNKLIFP IMALLAGILG GVFGIGGGML
ISPLLLHVGI APEVTAATCS FMVFFSSTMS ALQYLLLGMD HIETALMLAI VCFVASLIGL LVVQRAIQSY GRPSIIVFSV
SIVMTLSVVL MTSFGMIRTW KDYVSGRYMG FKLPC*