GBrowse Details

Vigan.01G175000.01

Basic Information:
Name: Vigan.01G175000.01
Multiple alignment
Variant Information
Position: Chr01:20292672..20295972 (+ strand)
Length: 3301
Functional Information:
Description: Similar to NAD(P)-binding Rossmann-fold superfamily protein. [XP_007025110.1, Theobroma cacao]
InterPro: NAD(P)-binding domain (IPR016040)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:17.09,14.70,11.75,39.00,5.35,16.13,4.25,15.16
Arabidopsis thaliana homolog: AT2G34460.1
Automatic updates:
Name: NM_001252923 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100812074 (LOC100812074), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:20292672..20292748 (+ strand)
Length: 77
Type: five_prime_UTR
Position: Chr01:20292749..20292865 (+ strand)
Length: 117
Type: CDS
Position: Chr01:20292994..20293194 (+ strand)
Length: 201
Type: CDS
Position: Chr01:20293462..20293581 (+ strand)
Length: 120
Type: CDS
Position: Chr01:20294286..20294558 (+ strand)
Length: 273
Type: CDS
Position: Chr01:20294661..20294825 (+ strand)
Length: 165
Type: CDS
Position: Chr01:20294826..20295972 (+ strand)
Length: 1147
Type: three_prime_UTR


>Vigan.01G175000.01
CACGTGGCGA GGTTATAGCG TCTCGTTTGG CAGTGTGGAA ATTAGAAGAA ATCTGTGTTT TTTACAGTGT TAGAATCATG
CCAATGGCTT CGACTCTCAC AATTGTAAGA AATCCCATTT TCCTTACTCA CCATTACCAA TTCAACAAGC AGTTCACAAC
ACCTTCTTCC TTACGCCTCC TCAGTTTCGC AAAGATGGAA GGAAGTGAGA TTAGTGAGGA AGTGGGGGAG GATTCGAGAG
CGAAGAGGAA AATTTTTGTT GCTGGAGCCA CTGGTAGCAC TGGGAAAAGA ATCGTTGAGC AGTTATTGGC AAAGGGTTTT
TCTGTTAAGG CTGGGGTTAG GGATTTGGAC AAGGCCAAGT CCACCCTTTC CTCTGCCAAC CCATCTCTTC AAATTATAAA
AGCTGATGTC ACAGAGGGGT CTGATAAGCT AGCTGAAGCC ATTGGTGATG ATTCAGAAGC AGTGGTATGT GCCACGGGCT
TTCGGCCGGG CTGGGATTTG CTTGCTCCGT GGAAGGTTGA CAATTTTGGT ACTGTAAACC TTGTTGAAGC ATGCAGGAAA
CGTAATGTCA AGAGATTCAT TCTTATCAGT TCCATCTTAG TTAATGGAGC ATCTATGGGA CAGCTACTCA ATCCGGCTTA
CATCTTTCTT AATGTTTTTG GACTCACCTT AGTAGCAAAA CTACAGGCAG AGAATTATAT CAGGAAATCT GGCATAAACT
ACACAATTAT AAGACCGGGC GGGTTGAGAA ATGATCCTCC AACTGGAAAT GTTGTTATGG AGCCAGAGGA CACCCTTTAT
GAAGGTTCCA TATCCAGAGA TCAAGTTGCG GAAGTAGCTG TGGAGGCATT GGCTTATCCT GAGGCATCTT ACAAAGTCGT
GGAAATTGTG TCTCGCCCAG ATGCTGCTAA GCGTTCATAC CATGACCTTT TTGGTTCCAT AAGGCAGCGA TGATTCCCGA
CTTTATGATT TGCTTGCAGA TTAATGAATT TGTTTCTCTG TTATTTTACT TTGTGGTGGC CAATGTGTAT CTTAACTGTG
TTCCATTTGT GTTACTTCAT TCAATTGGTA TGCTAGAGTA ATATTGTAAA TATTTCAGTG CATCTTTTAT TTGTTCATCT
CCCACTCTCC CCCATTAACG GTGAGTTGAT AATGCACCGT GAGCACTATA GAACATAATA CTTAATTTAA TTAATACAAG
TTTGGAGCAT GCACTTAATA AGCTCTTACA AAACACGAGT CACAGTTACT AATAAGCTTA ACTGAAAGCT TATTGAAATA
AGTTCGTTCG AAAGAGCTTA TTTTGATAAG TTTTCATAAA GTTTAATAAA ATCAGAGATT ATAAGTCAAA TATTCATGAG
TCCTTAACAT TTCGGATGAA GCCTCCGTTA CAAACAATCA AGTTAGCAGA AAATACTCTC CGGAAAATCC AAGTACAGGA
AACATTACAT AGATGGTTGA TAACTGTTGC GAAAACAACA ATTTCTCTGA GCATTAGATT ACATTACATT GATGAATTCC
AGAAACAAAC ATCAACTCAC AGAAAATAAA GAATTAAATG ATGTAATTGT ATATTCTCTC AGCTCAGCAA CTGAACATCA
TATTACTCTT CTCAGGTAAA CCTGGCAACC ACAAAAGCAA AGGCTACGAA AACAGCTTGC GCACAAAGAT GCACTCCTGC
ACTTTCCATC GGTGCGGGTG GAATTGCAGC AACATCTTCT ACCACATTCT CAGCCACACA ACAGTGACCA AAAACTAACA
TAGCAATAAT GCAGAAAGGA AGAACTATAG CAGTTCTGCA GCTCTCCATT TTTGTACCAT CCATCACTTG ATGAATAACT
ACTAGTTGGG CAGTGTTTGT AAATAGTTGT GAATGATGAA AATAGTGGAA CAGCACAAGT CATTTTATAG TTAGGATTTG
AGACAAGTGA GGAATTTTGA TGTGTAATAT GTAGCTGAAA CAGTAAACAC AATGATCTGA GAGTGTGTGG GTTAATGATA
ATGTTCTGTC TCCCTCACCT TAAACAAATA GGGTGCTAGC ACTGTATAAC GGTGCTGAGT TAGAAGTATG TAATCAGCTT
TTGAAGCGTA AACATTAAGC 

>Vigan.01G175000.01
ATGCCAATGG CTTCGACTCT CACAATTGTA AGAAATCCCA TTTTCCTTAC TCACCATTAC CAATTCAACA AGCAGTTCAC
AACACCTTCT TCCTTACGCC TCCTCAGTTT CGCAAAGATG GAAGGAAGTG AGATTAGTGA GGAAGTGGGG GAGGATTCGA
GAGCGAAGAG GAAAATTTTT GTTGCTGGAG CCACTGGTAG CACTGGGAAA AGAATCGTTG AGCAGTTATT GGCAAAGGGT
TTTTCTGTTA AGGCTGGGGT TAGGGATTTG GACAAGGCCA AGTCCACCCT TTCCTCTGCC AACCCATCTC TTCAAATTAT
AAAAGCTGAT GTCACAGAGG GGTCTGATAA GCTAGCTGAA GCCATTGGTG ATGATTCAGA AGCAGTGGTA TGTGCCACGG
GCTTTCGGCC GGGCTGGGAT TTGCTTGCTC CGTGGAAGGT TGACAATTTT GGTACTGTAA ACCTTGTTGA AGCATGCAGG
AAACGTAATG TCAAGAGATT CATTCTTATC AGTTCCATCT TAGTTAATGG AGCATCTATG GGACAGCTAC TCAATCCGGC
TTACATCTTT CTTAATGTTT TTGGACTCAC CTTAGTAGCA AAACTACAGG CAGAGAATTA TATCAGGAAA TCTGGCATAA
ACTACACAAT TATAAGACCG GGCGGGTTGA GAAATGATCC TCCAACTGGA AATGTTGTTA TGGAGCCAGA GGACACCCTT
TATGAAGGTT CCATATCCAG AGATCAAGTT GCGGAAGTAG CTGTGGAGGC ATTGGCTTAT CCTGAGGCAT CTTACAAAGT
CGTGGAAATT GTGTCTCGCC CAGATGCTGC TAAGCGTTCA TACCATGACC TTTTTGGTTC CATAAGGCAG CGATGA

>Vigan.01G175000.01
MPMASTLTIV RNPIFLTHHY QFNKQFTTPS SLRLLSFAKM EGSEISEEVG EDSRAKRKIF VAGATGSTGK RIVEQLLAKG
FSVKAGVRDL DKAKSTLSSA NPSLQIIKAD VTEGSDKLAE AIGDDSEAVV CATGFRPGWD LLAPWKVDNF GTVNLVEACR
KRNVKRFILI SSILVNGASM GQLLNPAYIF LNVFGLTLVA KLQAENYIRK SGINYTIIRP GGLRNDPPTG NVVMEPEDTL
YEGSISRDQV AEVAVEALAY PEASYKVVEI VSRPDAAKRS YHDLFGSIRQ R*