GBrowse Details

Vigan.01G176500.01

Basic Information:
Name: Vigan.01G176500.01
Multiple alignment
Variant Information
Position: Chr01:20703771..20712752 (+ strand)
Length: 8982
Functional Information:
Description: Similar to Uncharacterized protein. [C6TLG5, Glycine max]
GO: Biological Process: metabolic process (GO:0008152)
Molecular Function: transferase activity, transferring acyl groups (GO:0016746)
InterPro: Phospholipid/glycerol acyltransferase (IPR002123)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.39,7.66,1.41,11.37,0.83,5.00,2.96
Arabidopsis thaliana homolog: AT5G60620.1
Automatic updates:
Name: JX843441 NCBI(nuccore)
Organism: Arachis hypogaea
Description: Arachis hypogaea cultivar Hua yu 19 glycerol-3-phosphate acyltransferase 9 (GPAT9) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: KJ680133 NCBI(nuccore)
Organism: Arachis hypogaea
Description: Arachis hypogaea glycerol-3-phosphate acyltransferase 9 (GPAT9) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: NM_001254220 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max glycerol-3-phosphate acyltransferase 3-like (LOC100814759), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:20703771..20703984 (+ strand)
Length: 214
Type: five_prime_UTR
Position: Chr01:20703985..20704106 (+ strand)
Length: 122
Type: CDS
Position: Chr01:20704338..20704395 (+ strand)
Length: 58
Type: CDS
Position: Chr01:20705343..20705461 (+ strand)
Length: 119
Type: CDS
Position: Chr01:20706038..20706137 (+ strand)
Length: 100
Type: CDS
Position: Chr01:20707026..20707121 (+ strand)
Length: 96
Type: CDS
Position: Chr01:20707223..20707319 (+ strand)
Length: 97
Type: CDS
Position: Chr01:20711010..20711097 (+ strand)
Length: 88
Type: CDS
Position: Chr01:20711168..20711264 (+ strand)
Length: 97
Type: CDS
Position: Chr01:20711441..20711526 (+ strand)
Length: 86
Type: CDS
Position: Chr01:20711627..20711746 (+ strand)
Length: 120
Type: CDS
Position: Chr01:20711830..20711928 (+ strand)
Length: 99
Type: CDS
Position: Chr01:20712532..20712580 (+ strand)
Length: 49
Type: CDS
Position: Chr01:20712581..20712752 (+ strand)
Length: 172
Type: three_prime_UTR


>Vigan.01G176500.01
TTTTTTTACC AAATTATGTC ATTGCATGGA AACTGTTTGG TGGAATTAGA TTATAGAATT TATTAATCAA TCAATTGCTG
CAACAAACGG TGAAATTTGT TCACTAACTC TGAAGATTTT ATTGAAGCAC TTATTTTTTA TCCATGCTTG TTTCAGGATC
AAAAGGTCTC TAATTTAGTC ACGCGATTTT GGTTGTTGTG GAAGCGTAAC AAAGATGAAT AGAACTGGGA AACTCAAATC
GTCGAGTTCT GAATTGGACC TTGATCGGCC AAACATTGAG GATTACCTAC CCTCTGGATC CAGTGTTCAA CATGAACGGC
ATGGGAAGCT CCGCCTGTGT GATTTGCTCG ACATTTCACC TAGTCTGTCT GAGGCAGCAG GTGCCATTGT AGATGATTCA
TTCACAAGGT GCTTCAAATC AAATCCTCCA GAACCTTGGA ACTGGAATGT TTATTTGTTT CCTTTGTGGT GCTGTGGAGT
TGTGATTCGA TATTTGATTA TTTTCCCTAT TAGAATTCTA GTGTTGACAT TAGGATGGAT TATATTTCTT TCAGCCTTCA
TTCCAGTGCA CTGCCTCCTG AAAGGAAATG ATGATTTGAG GAAAAAGATT GAGAGGTGTT TGGTGGAGAT GATGTGCAGT
TTCTTTGTTG CATCCTGGAC TGGGGTTGTT AAGTACCATG GGCCAAGGCC CAGTGTACGA CCAAAACAGG TTTTTGTGGC
CAATCATACT TCCATGATTG ATTTCATTAT CTTAGAACAG ATGACTGCAT TTGCTGTTAT TATGCAGAAG CATCCTGGAT
GGGTTGGATT ATTGCAGAGC ACTATTTTAG AGAGTGTAGG GTGTATCTGG TTCAATCGTA CAGAGGTGAA GGATCGAGAA
ATTGTGGCAA GGAAATTGAG GGAACATGTC CAGGGAGCTA ACAATAACCC TCTTCTTATA TTTCCTGAAG GAACTTGTGT
AAATAATCAC TATACAGTCA TGTTTAAGAA GGGTGCATTT GAACTTGGCT GCACAGTTTG CCCTGTTGCA ATCAAGTACA
ATAAAATTTT CGTAGATGCG TTTTGGAATA GTCGAAAACA ATCATTCACC ACTCATCTCT TGCAATTAAT GACATCTTGG
GCTGTAGTTT GTGATGTTTG GTACTTGGAG CCACAAAACT TGAAGCCTGG AGAGACATCC ATTGAATTTG CAGAGAGGGT
GAGAGATATT ATATCACATC GTGCTGGGCT CAAAAAGGTT CCCTGGGATG GATATCTGAA GTATTCTCGC CCCAGTCCAA
AACACAGAGA AAGAAAGCAA CAAAACTTTG CTCAGTCTGT GTTGCAGCGC TTAGAGGAAA AATAACGCAT ACCTTTTTAC
CATTCAGCAA GGGCTTTCTC CTGCCCTTCT TTCTATTCTA CTTGCATTTT GTTTATTTAG TTATCCATGT CGATCTTACA
TGAAGTTACC TGATAGATAT TTTCATGATT TGTTGCACTA TGATACGGAC AAATTGACAA GAACTAGCTA GTTTTGG

>Vigan.01G176500.01
ATGAATAGAA CTGGGAAACT CAAATCGTCG AGTTCTGAAT TGGACCTTGA TCGGCCAAAC ATTGAGGATT ACCTACCCTC
TGGATCCAGT GTTCAACATG AACGGCATGG GAAGCTCCGC CTGTGTGATT TGCTCGACAT TTCACCTAGT CTGTCTGAGG
CAGCAGGTGC CATTGTAGAT GATTCATTCA CAAGGTGCTT CAAATCAAAT CCTCCAGAAC CTTGGAACTG GAATGTTTAT
TTGTTTCCTT TGTGGTGCTG TGGAGTTGTG ATTCGATATT TGATTATTTT CCCTATTAGA ATTCTAGTGT TGACATTAGG
ATGGATTATA TTTCTTTCAG CCTTCATTCC AGTGCACTGC CTCCTGAAAG GAAATGATGA TTTGAGGAAA AAGATTGAGA
GGTGTTTGGT GGAGATGATG TGCAGTTTCT TTGTTGCATC CTGGACTGGG GTTGTTAAGT ACCATGGGCC AAGGCCCAGT
GTACGACCAA AACAGGTTTT TGTGGCCAAT CATACTTCCA TGATTGATTT CATTATCTTA GAACAGATGA CTGCATTTGC
TGTTATTATG CAGAAGCATC CTGGATGGGT TGGATTATTG CAGAGCACTA TTTTAGAGAG TGTAGGGTGT ATCTGGTTCA
ATCGTACAGA GGTGAAGGAT CGAGAAATTG TGGCAAGGAA ATTGAGGGAA CATGTCCAGG GAGCTAACAA TAACCCTCTT
CTTATATTTC CTGAAGGAAC TTGTGTAAAT AATCACTATA CAGTCATGTT TAAGAAGGGT GCATTTGAAC TTGGCTGCAC
AGTTTGCCCT GTTGCAATCA AGTACAATAA AATTTTCGTA GATGCGTTTT GGAATAGTCG AAAACAATCA TTCACCACTC
ATCTCTTGCA ATTAATGACA TCTTGGGCTG TAGTTTGTGA TGTTTGGTAC TTGGAGCCAC AAAACTTGAA GCCTGGAGAG
ACATCCATTG AATTTGCAGA GAGGGTGAGA GATATTATAT CACATCGTGC TGGGCTCAAA AAGGTTCCCT GGGATGGATA
TCTGAAGTAT TCTCGCCCCA GTCCAAAACA CAGAGAAAGA AAGCAACAAA ACTTTGCTCA GTCTGTGTTG CAGCGCTTAG
AGGAAAAATA A

>Vigan.01G176500.01
MNRTGKLKSS SSELDLDRPN IEDYLPSGSS VQHERHGKLR LCDLLDISPS LSEAAGAIVD DSFTRCFKSN PPEPWNWNVY
LFPLWCCGVV IRYLIIFPIR ILVLTLGWII FLSAFIPVHC LLKGNDDLRK KIERCLVEMM CSFFVASWTG VVKYHGPRPS
VRPKQVFVAN HTSMIDFIIL EQMTAFAVIM QKHPGWVGLL QSTILESVGC IWFNRTEVKD REIVARKLRE HVQGANNNPL
LIFPEGTCVN NHYTVMFKKG AFELGCTVCP VAIKYNKIFV DAFWNSRKQS FTTHLLQLMT SWAVVCDVWY LEPQNLKPGE
TSIEFAERVR DIISHRAGLK KVPWDGYLKY SRPSPKHRER KQQNFAQSVL QRLEEK*