GBrowse Details

Vigan.01G209200.01

Basic Information:
Name: Vigan.01G209200.01
Multiple alignment
Variant Information
Position: Chr01:27136986..27162050 (+ strand)
Length: 25065
Functional Information:
Description: Similar to Uncharacterized protein. [I1KS96, Glycine max]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:4.58,2.40,4.88,4.34,5.59,3.92,6.74,6.83
Arabidopsis thaliana homolog: AT2G32760.1
Structure :
Position: Chr01:27136986..27137154 (+ strand)
Length: 169
Type: five_prime_UTR
Position: Chr01:27137155..27137334 (+ strand)
Length: 180
Type: CDS
Position: Chr01:27138755..27138961 (+ strand)
Length: 207
Type: CDS
Position: Chr01:27150302..27150482 (+ strand)
Length: 181
Type: CDS
Position: Chr01:27159707..27159855 (+ strand)
Length: 149
Type: CDS
Position: Chr01:27160134..27160352 (+ strand)
Length: 219
Type: CDS
Position: Chr01:27161485..27161607 (+ strand)
Length: 123
Type: CDS
Position: Chr01:27161608..27162050 (+ strand)
Length: 443
Type: three_prime_UTR


>Vigan.01G209200.01
CCCAGAGAAA ACAAAATCCA ACAAAGACAA GGCAAATTTC CTTTCTCTCT CCCAATAAAA CCAGGCAATT TTCCAGAAAA
AACCAGGAGT AGAAGAATAC AAGAGGTATC GATGACGGAC TTCATTTGGT GATAAACGAA CTTGAGGACG ATGGTGGGTT
CGATTAGTCA TGGAGTCAAA CCAGATTCTG TCATTGCGGA CCATCCCAAC TGATCCCGAA CATGTGAAGG TCATTCAGTG
GGAGGACTTC CAGCACGATC TTGCGAGGTT GGTGAGTCTC TCTTCCACAT TGGACGAATC CAAGGAGAAG AAGCGCAACC
TTCACCACAA GCTCGAGTCT CTCATCCAGG TCAATGTTGA ATCATTAGGT CAGTTGAATG AACTTGAGGA GATGCGTCAG
AAATTGGAAT CAAAGAAAGT GGTTATGGAA AATATGTCTA TACGTTATAG GCTGGCTAAG GAGGATGCTA ACAAACAGGA
GGAGCAGCTT AGTGGTGCAG TGCAATCACT TCTGGTTGCA GGGGGTGCTC TTTCTGTATG CAGCAGAAAC CTCCAAGAAT
CAAGTAGATT TTTGTATGAT GAAAATGGTT ATGTTCATAT GAGAAAACTT CAAAAGATGT TGAGGAGGAG GCAACAACAT
ATGGTATCTC AAATTTCAAT GCTGTATCCT ATGAAGATCT TGGTTGGGCC AGCACAAGAG CAAGAGCTTG AGGCTTATCC
TTCAAGTAAC CTGGCAGGGA CTTCTGCTGG ACTTAAACCA GTTAATCAAG GATCCTTAAC AATTCATGGT CTGCATTTGA
ATGTGCTAAT TTTTAGGAAA TTGAGCTTTT TCACTGATAA GAAGGAAACT CGGGAGTCTG CTACTGCCCT AGGATATGTT
GCACATGCTG TTTCCCTTGT AGCCTCTTAC TTGCAAGTTC CTTTGCGATA TCCTTTACGG TTGTGTGCTT CTCATTCATA
TATTATAGAC AATGCGCCTT CCACAGAGCT AACATCTGAA GCTTCATCAA ATGCAAACAC AAATGTCAAG CATGTGGAAT
TCCCCCTTTT TTTAGAAGGT CAAGACACAA CAAGAGCAGC TTATGCTGTA TTCTTACTAA ATAAGGATTT AGAACAGCTT
TTGAATTTCA CTGATGCAAA GAGCTTGGGA CCACGCCATG TACTTGCTAA TTTGAGGGAG CTCTTGAGGA TTATCCAGTC
TTCAGCTTTT ATAGACAACT TGATCTAGTG GATTTTGTCT CTACTGTAAT TTCCTTGTAA ATCAATTTTT TTTTTTTCAA
TTCTTGCCAG GGTGCAATTT TTTTGGTGCA CCTTCCAATG TAGCGTTGTT ATAAAAATGG AGCCGACCTT TCTATAATGG
ATTTGGTATT ATTTAGAAAA GAGTATACAG TGCAGCCGAA AGTATTGTTA TTTGGGCTTA TTATAAAATG TCAAATACAT
ACCTGCAGGG ATATACTGTA TAAGAACATA TGGAGGAACG CATGCATTTT TAGATTCTTT GAATACTTTT GTTTAAAACA
TGAAACAGTG AGTGGGGTAG AACTCAGCGC TGAAATTCCT CTTTGGGTGA GAAAAGGAGA TGCAATAATT TTGATGATTT
TATTGCGTCA TGTGATTAGT TTATTTGATT CATTTCTTTT AACAGTTGTC AATTGAGTTA TTTAAAGAAA A

>Vigan.01G209200.01
ATGGAGTCAA ACCAGATTCT GTCATTGCGG ACCATCCCAA CTGATCCCGA ACATGTGAAG GTCATTCAGT GGGAGGACTT
CCAGCACGAT CTTGCGAGGT TGGTGAGTCT CTCTTCCACA TTGGACGAAT CCAAGGAGAA GAAGCGCAAC CTTCACCACA
AGCTCGAGTC TCTCATCCAG GTCAATGTTG AATCATTAGG TCAGTTGAAT GAACTTGAGG AGATGCGTCA GAAATTGGAA
TCAAAGAAAG TGGTTATGGA AAATATGTCT ATACGTTATA GGCTGGCTAA GGAGGATGCT AACAAACAGG AGGAGCAGCT
TAGTGGTGCA GTGCAATCAC TTCTGGTTGC AGGGGGTGCT CTTTCTGTAT GCAGCAGAAA CCTCCAAGAA TCAAGTAGAT
TTTTGTATGA TGAAAATGGT TATGTTCATA TGAGAAAACT TCAAAAGATG TTGAGGAGGA GGCAACAACA TATGGTATCT
CAAATTTCAA TGCTGTATCC TATGAAGATC TTGGTTGGGC CAGCACAAGA GCAAGAGCTT GAGGCTTATC CTTCAAGTAA
CCTGGCAGGG ACTTCTGCTG GACTTAAACC AGTTAATCAA GGATCCTTAA CAATTCATGG TCTGCATTTG AATGTGCTAA
TTTTTAGGAA ATTGAGCTTT TTCACTGATA AGAAGGAAAC TCGGGAGTCT GCTACTGCCC TAGGATATGT TGCACATGCT
GTTTCCCTTG TAGCCTCTTA CTTGCAAGTT CCTTTGCGAT ATCCTTTACG GTTGTGTGCT TCTCATTCAT ATATTATAGA
CAATGCGCCT TCCACAGAGC TAACATCTGA AGCTTCATCA AATGCAAACA CAAATGTCAA GCATGTGGAA TTCCCCCTTT
TTTTAGAAGG TCAAGACACA ACAAGAGCAG CTTATGCTGT ATTCTTACTA AATAAGGATT TAGAACAGCT TTTGAATTTC
ACTGATGCAA AGAGCTTGGG ACCACGCCAT GTACTTGCTA ATTTGAGGGA GCTCTTGAGG ATTATCCAGT CTTCAGCTTT
TATAGACAAC TTGATCTAG

>Vigan.01G209200.01
MESNQILSLR TIPTDPEHVK VIQWEDFQHD LARLVSLSST LDESKEKKRN LHHKLESLIQ VNVESLGQLN ELEEMRQKLE
SKKVVMENMS IRYRLAKEDA NKQEEQLSGA VQSLLVAGGA LSVCSRNLQE SSRFLYDENG YVHMRKLQKM LRRRQQHMVS
QISMLYPMKI LVGPAQEQEL EAYPSSNLAG TSAGLKPVNQ GSLTIHGLHL NVLIFRKLSF FTDKKETRES ATALGYVAHA
VSLVASYLQV PLRYPLRLCA SHSYIIDNAP STELTSEASS NANTNVKHVE FPLFLEGQDT TRAAYAVFLL NKDLEQLLNF
TDAKSLGPRH VLANLRELLR IIQSSAFIDN LI*