GBrowse Details

Vigan.01G214000.01

Basic Information:
Name: Vigan.01G214000.01
Multiple alignment
Variant Information
Position: Chr01:27965904..27974409 (+ strand)
Length: 8506
Functional Information:
Description: Similar to Microfibrillar-associated protein. [G7LH32, Medicago truncatula]
InterPro: Micro-fibrillar-associated protein 1, C-terminal (IPR009730)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:74.72,31.01,10.01,11.05,12.85,11.97,13.17,9.33
Arabidopsis thaliana homolog: AT5G17900.1
Automatic updates:
Name: BT094525 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-18D16 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:27965904..27966369 (+ strand)
Length: 466
Type: five_prime_UTR
Position: Chr01:27966370..27967565 (+ strand)
Length: 1196
Type: CDS
Position: Chr01:27973745..27973859 (+ strand)
Length: 115
Type: CDS
Position: Chr01:27973860..27974409 (+ strand)
Length: 550
Type: three_prime_UTR


>Vigan.01G214000.01
CGGGTATTGA ATTTAATGTT TATTTACTTT GAGATGAATT TCCGAACAAT AATAATATTT ACAGATTTTT CAAATCAATT
TCATAAGAGT TTCACAGAAC AAATTGGGGG CTGCTTCAAA CGAGGAAGAG GGTTTCCGCT TCTGTGACTG TAAGTATTTG
AAACTTTTAT CGCCCCTATT TTCTGTATCT TCTTCTGTTA TCTATCAATT CATGTTAGTA TTTTGAATCG AACTCTCTGG
GTTACGCTTT CAAATTCTTC GCAAATCAAA ATTTATCATT CACCATATCC TTTTTTTCTG CGTTCCTTCA TTCATTTATT
CACTTTCTTG GAATTGTACT TTATCTGGAA AATTCTGTTG CTGTATACAT GTTTTACCCA TTTTACGTGC AAAATAGGGT
TTGGTGGAGA AGTGAATCGA AACTAGATTG TTGGTATTTG TAGTGGCGTT CAATTGAGGA AGAAATATGT CGGTGACAGC
GGGTGTTAGT GATACTGTAA TAGCCATTAG GGATAAGCTG AGAGGTAAAA TTGGGCAAAC AAAAGTTCAG CGTTATTGGC
CTGGTAAAGT TCCTGAATGG GCTGATGATG AGAATGAAGA CATTGCCCCT GCCGATATTA GACCCTCCAG GGAAGCTGCC
TTGGAGAAAG TATTTCCTCG TCACGAGGAA GATACTGCTA TAGTTAGAAA AGATGATCGC CGGCTCCGGC GATTGGCTGA
GAGTCGGATA GATAACCGGG AGGAGGTGAG GGCTGATCAT CGCCGCATTC GGCAAGCTGA GATTGTTTCC ACCATTGAAG
AGGAGGCCAG GAGGCAGGAA GGGTTGGAAT TGGAAGAAGA AGATGAAAAT GCTTTGGCAG AAAGAAGGAG GCTGATCAAA
GAGAAGTTGC TTCATAGAGA GCAGGAAGAG GCGCTACCTC AGGAAGAGGA GGAGGAGGAG GAAGAGGAGG AGGAGGAGGA
GGAATCTGAG TATGAGACTG ACTCTGATGA GGAATATACT GGAGTGGCTA TGGTGAAGCC TGTTTTTGTT CCCAAGTCTG
AGAGAGATAC CATTGCTGAG CGCGAGCGGC TTGAGGCTGA GGAACAGGCA CTTGAAGATG CAAGGAAGAG GAGGTTGGAG
GAAAGAAGGA TTGAGACAAA GCAGATTGTT GTTGAGGAGA TCCGAAAGGA TGAAGAAATC CAGAAAAACT TGGAAATGGA
GGCCAACATT GCTGATGTGG ATACTGATGA TGAAGTCAAT GAGGCTGAGG AGTATGAGGC TTGGAAAGTT AGGGAGATTG
GTAGGATCAA GAGGGATAGG GAGGATCGGG AGGCAATGTT GAAGGAAAAA GAAGAGATTG AGCGGGTGAG AAACATGACA
GAGGAAGAGA GGAGGGAGTG GGAAAGGAAG AATCCGAAAC CTGCTCCACC ACCAAAGCAG AAGTGGAGAT TTATGCAGAA
ATACTATCAC AAAGGAGCTT TCTTCCAGTC TGAATCTGAC GATAGGGCTT CCACTGTTGG ATCTGATGGT ATTTTCACAC
GTGATTTCTC TGCTCCAACT GGGGAGGATA AAATGGACAA GACAATATTA CCCAAGGTTA TGCAAGTCAA GCACTTTGGT
CGTAGTGGAA GAACTAAATG GACCCATCTT GTCAATGAGG ATACAACTGA TTGGAACAAC CCATGGACTT ACAATGATCC
TCTTCGTGCA AAGTATAATG ACAAAATGGC AGCAATGAAC GCGCCTATGT CAAAACCTAA AGGAAGCAGA AAATTGAAGG
ATTGGGAATC TCGATGAAAA TTTGAACTTA GAGAATTATG CTGGTGGGAG ATCTCGTCGT TTCCGTTACT AGACTTAAGA
TGTCCTTATC CCGTGTAAGC TTGTGCTGTC TTAAACATAA CGTAAACTAG TTTATCATAG ATCATGGAAG GTAGTTCATT
CATGCAGAAT GTGACAGGAA TTCACACTAG TTTATGCTGA TTTTCTTCAG TTAATGAATC ATAGCCGATT TAGATCCTGC
CAGCCCAGAC TAAAGACTTT GACATCCTTT CTTTGTTTTG TCATAATTTT AACTTTATTA CTGGCTGGCT ATTACGATTT
TATTGAGTTT GCTGATGCTT CAGGAGCCAG TTTTTCAAGT TAACATACTG TATGTGCACA ACGTACTGAC TTGAACTCCG
ACAAATAGCA CTATCGTGAC GGTGTCCATA GGTGTACCAG AACACTAGTA AATGTAGCAT AATCTTCCAT GTCTTGATAA
ACAAAGGGGT ATATTGAAAG TTATTTCGTA TCCAACTTGG TACTTGTTTG TTTGTTTGAG TTATTTCCCT AATCAATAAA
TCCTAAA

>Vigan.01G214000.01
ATGTCGGTGA CAGCGGGTGT TAGTGATACT GTAATAGCCA TTAGGGATAA GCTGAGAGGT AAAATTGGGC AAACAAAAGT
TCAGCGTTAT TGGCCTGGTA AAGTTCCTGA ATGGGCTGAT GATGAGAATG AAGACATTGC CCCTGCCGAT ATTAGACCCT
CCAGGGAAGC TGCCTTGGAG AAAGTATTTC CTCGTCACGA GGAAGATACT GCTATAGTTA GAAAAGATGA TCGCCGGCTC
CGGCGATTGG CTGAGAGTCG GATAGATAAC CGGGAGGAGG TGAGGGCTGA TCATCGCCGC ATTCGGCAAG CTGAGATTGT
TTCCACCATT GAAGAGGAGG CCAGGAGGCA GGAAGGGTTG GAATTGGAAG AAGAAGATGA AAATGCTTTG GCAGAAAGAA
GGAGGCTGAT CAAAGAGAAG TTGCTTCATA GAGAGCAGGA AGAGGCGCTA CCTCAGGAAG AGGAGGAGGA GGAGGAAGAG
GAGGAGGAGG AGGAGGAATC TGAGTATGAG ACTGACTCTG ATGAGGAATA TACTGGAGTG GCTATGGTGA AGCCTGTTTT
TGTTCCCAAG TCTGAGAGAG ATACCATTGC TGAGCGCGAG CGGCTTGAGG CTGAGGAACA GGCACTTGAA GATGCAAGGA
AGAGGAGGTT GGAGGAAAGA AGGATTGAGA CAAAGCAGAT TGTTGTTGAG GAGATCCGAA AGGATGAAGA AATCCAGAAA
AACTTGGAAA TGGAGGCCAA CATTGCTGAT GTGGATACTG ATGATGAAGT CAATGAGGCT GAGGAGTATG AGGCTTGGAA
AGTTAGGGAG ATTGGTAGGA TCAAGAGGGA TAGGGAGGAT CGGGAGGCAA TGTTGAAGGA AAAAGAAGAG ATTGAGCGGG
TGAGAAACAT GACAGAGGAA GAGAGGAGGG AGTGGGAAAG GAAGAATCCG AAACCTGCTC CACCACCAAA GCAGAAGTGG
AGATTTATGC AGAAATACTA TCACAAAGGA GCTTTCTTCC AGTCTGAATC TGACGATAGG GCTTCCACTG TTGGATCTGA
TGGTATTTTC ACACGTGATT TCTCTGCTCC AACTGGGGAG GATAAAATGG ACAAGACAAT ATTACCCAAG GTTATGCAAG
TCAAGCACTT TGGTCGTAGT GGAAGAACTA AATGGACCCA TCTTGTCAAT GAGGATACAA CTGATTGGAA CAACCCATGG
ACTTACAATG ATCCTCTTCG TGCAAAGTAT AATGACAAAA TGGCAGCAAT GAACGCGCCT ATGTCAAAAC CTAAAGGAAG
CAGAAAATTG AAGGATTGGG AATCTCGATG A

>Vigan.01G214000.01
MSVTAGVSDT VIAIRDKLRG KIGQTKVQRY WPGKVPEWAD DENEDIAPAD IRPSREAALE KVFPRHEEDT AIVRKDDRRL
RRLAESRIDN REEVRADHRR IRQAEIVSTI EEEARRQEGL ELEEEDENAL AERRRLIKEK LLHREQEEAL PQEEEEEEEE
EEEEEESEYE TDSDEEYTGV AMVKPVFVPK SERDTIAERE RLEAEEQALE DARKRRLEER RIETKQIVVE EIRKDEEIQK
NLEMEANIAD VDTDDEVNEA EEYEAWKVRE IGRIKRDRED REAMLKEKEE IERVRNMTEE ERREWERKNP KPAPPPKQKW
RFMQKYYHKG AFFQSESDDR ASTVGSDGIF TRDFSAPTGE DKMDKTILPK VMQVKHFGRS GRTKWTHLVN EDTTDWNNPW
TYNDPLRAKY NDKMAAMNAP MSKPKGSRKL KDWESR*