GBrowse Details

Vigan.01G214600.01

Basic Information:
Name: Vigan.01G214600.01
Multiple alignment
Variant Information
Position: Chr01:28093453..28147203 (+ strand)
Length: 53751
Functional Information:
Description: Similar to Uncharacterized protein. [I1K3R3, Glycine max]
GO: Biological Process: cellular amino acid metabolic process (GO:0006520)
Biological Process: metabolic process (GO:0008152)
Biological Process: cellular amino acid biosynthetic process (GO:0008652)
Biological Process: aspartate family amino acid biosynthetic process (GO:0009067)
Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: aspartate kinase activity (GO:0004072)
Molecular Function: homoserine dehydrogenase activity (GO:0004412)
Molecular Function: oxidoreductase activity (GO:0016491)
Molecular Function: amino acid binding (GO:0016597)
Molecular Function: NADP binding (GO:0050661)
InterPro: Aspartate/glutamate/uridylate kinase (IPR001048)
Aspartate kinase domain (IPR001341)
Homoserine dehydrogenase, catalytic (IPR001342)
ACT domain (IPR002912)
Aspartate/homoserine dehydrogenase, NAD-binding (IPR005106)
Bifunctional aspartokinase/homoserine dehydrogenase I (IPR011147)
NAD(P)-binding domain (IPR016040)
Aspartate kinase, conserved site (IPR018042)
Homoserine dehydrogenase, conserved site (IPR019811)
GATS-like ACT domain (IPR027795)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:20.75,28.91,16.22,15.61,12.04,14.16,13.89,11.90
Arabidopsis thaliana homolog: AT1G31230.1, AT4G19710.2
Automatic updates:
Name: AF049706 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max aspartokinase-homoserine dehydrogenase (AK-HSDH) mRNA, complete cds.
PubMed ID: 10409053 NCBI(pubmed)
Status: Known Variant
Name: NM_001250544 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max aspartokinase-homoserine dehydrogenase (AK-HSDH), mRNA.
PubMed ID: 10409053 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr01:28093453..28093543 (+ strand)
Length: 91
Type: five_prime_UTR
Position: Chr01:28093544..28093677 (+ strand)
Length: 134
Type: CDS
Position: Chr01:28094166..28094230 (+ strand)
Length: 65
Type: CDS
Position: Chr01:28094311..28094685 (+ strand)
Length: 375
Type: CDS
Position: Chr01:28095522..28095610 (+ strand)
Length: 89
Type: CDS
Position: Chr01:28095696..28095999 (+ strand)
Length: 304
Type: CDS
Position: Chr01:28096173..28096225 (+ strand)
Length: 53
Type: CDS
Position: Chr01:28096309..28096523 (+ strand)
Length: 215
Type: CDS
Position: Chr01:28096667..28096754 (+ strand)
Length: 88
Type: CDS
Position: Chr01:28096840..28096953 (+ strand)
Length: 114
Type: CDS
Position: Chr01:28107464..28107562 (+ strand)
Length: 99
Type: CDS
Position: Chr01:28107662..28107856 (+ strand)
Length: 195
Type: CDS
Position: Chr01:28113575..28113657 (+ strand)
Length: 83
Type: CDS
Position: Chr01:28124826..28125051 (+ strand)
Length: 226
Type: CDS
Position: Chr01:28133810..28133955 (+ strand)
Length: 146
Type: CDS
Position: Chr01:28137595..28137730 (+ strand)
Length: 136
Type: CDS
Position: Chr01:28145916..28145999 (+ strand)
Length: 84
Type: CDS
Position: Chr01:28146088..28146180 (+ strand)
Length: 93
Type: CDS
Position: Chr01:28146686..28146931 (+ strand)
Length: 246
Type: CDS
Position: Chr01:28146932..28147203 (+ strand)
Length: 272
Type: three_prime_UTR


>Vigan.01G214600.01
TAGCCACAGG GGAAACTCGT TCCGGTCTCT GATTGCATCC CTAAAAGGAA GCAGGTCGTT AGAGTTTATA ATTTTCACTC
TGCAGCCACC CATGGCATCC TTTTCTGCCG CCGTAGCTAA CTTCTCCAGC ATTTCGCCTA CTCAGTTATC GCTCTACCAT
CGCCATAGGC TTTTCCAATC TCAATGCCGC CCCTTCTTCC TCTCGCGCTC TTCCCATTTC CTTCTGAAGG ATCTTACTTT
ACCACGGGGA AGAAAAACAA CAGACACCGT GATATGCGCT TCGTTTACTG ATGTTACATC AAATGTGTCT TTGGAGGAAA
AGCTACCTCC CAAAGGAGAA ACTTGGTCTG TGCACAAATT TGGTGGAACC TGTGTGGGAA CCTCACAAAG GATAAAGAAT
GTTGCAGAAA TAATTCTTAA AGATGATTCT GAGAGAAAAT TAGTGATTGT CTCTGCTATG TCGAAGGTGA CAGATATGAT
GTATGCCCTT ATCCAAAAGG CTCAATCACG CGACGAGTCT TATATATCTT CATTGGATGC TGTTTTGGAG AAGCATAGTG
CAACTGCACA TGACATTCTT GAGGGAGATA GTCTTGCTAG TTTCTTGTCT AAGTTGCACA ATGATATTAG TAACCTGAAG
GCGATGCTTC GTGCAATATA CATAGCTGGT CATGCAACAG AGTCCTTTAC AGATTTTGTT GTGGGACATG GGGAATTATG
GTCTGCTCAG ATGTTGTCTC TAGTTATTAG AAAGAAAGGG ATCGATTGCA AATGGATGGA TACAAGGGAT GTCATTATTG
TAAATCCTTC TGGTTCTAAT CAAGTTGATC CTGACTATTT GGAGTCTGAG CAAAGACTTG AAAAATGGTA CTCTTTGAAT
CCATGTAAGG TAATCATTGC AACTGGATTC ATTGCAAGCA CACCTCAAAA CATTCCTACC ACATTGAAGA GAGATGGAAG
TGACTTCTCA GCAGCAATTA TGGGTGCTCT ATTTAGGGCT CGTCAAGTCA CAATTTGGAC AGATGTGGAT GGTGTGTATA
GTGCTGATCC TAGAAAAGTT AGCGAGGCTG TGATTTTGAA GACATTGTCT TATCAAGAGG CATGGGAAAT GTCTTATTTT
GGTGCAAATG TCTTGCATCC CCGCACAATT ATTCCTGTGA TGAGATATGG TATACCCATT ATGATAAGGA ACATTTTCAA
CCTTTCTGCT CCTGGAACAA AGATCTGCCA CCCTTCTGTT AATGACAATG AAGATGGGCA GAACCTGCAA AATTATGTCA
AAGGATTTGC AACCATAGAC AACTTGGCAC TCGTAAATGT CGAGGGAACT GGAATGGCTG GTGTTCCAGG TACAGCCAGT
GCTATTTTTG GTGCAGTAAA AGATGTTGGA GCTAATGTTA TAATGATATC TCAGGCTAGT AGTGAGCATT CCGTTTGCTT
TGCTGTTCCT GAGAAAGAAG TAAAAGCTGT TGCCGAGGCA TTGCAATCAA GATTTCGACA AGCTTTGGAT AACGGGCGTC
TTTCTCAGGT TGCGATTATC CCAAATTGTA GCATTCTAGC TGCAGTTGGC CAGAAGATGG CAAGCACCCC TGGAGTTAGC
GCCTCCCTTT TTAATGCATT GGCTAAGGCC AATATAAATG TCCGTGCTAT AGCACAAGGT TGTTCTGAGT ACAATATTAC
TGTTGTTGTG AAGCGAGAGG ATTGTATAAA GGCTTTGCGA GCTGTTCATT CGAGATTTTA TCTCTCAAGA ACCACCATAT
CAATGGGCAT TATTGGACCT GGACTAATTG GAAGTACACT ACTTGACCAG CTAAGGGATC AGGCCTCAAT CCTAAAAGAA
GAATTCAACA TTGATTTGCG TGTAATGGGC ATACTAGGTT CAAAGTCAAT GCTTCTTAGT GATGCGGGCA TTGACTTAAC
TAGATGGAGA GAACTTCGAG AGGAAAGAGG AGAAGCGGCT GATTTGGAAA AATTTGTTCA ACATGTACAT GGAAATAATT
TTATACCCAA CACGGCACTA GTCGACTGCA CAGCTGATTC TGTCATTGCT GGCTATTACT ATGAGTGGTT GCGCAAAGGA
ATACATGTAG TTACTCCTAA CAAGAAAGCA AATTCAGGGC CACTTGAGCA GTATTTGAGG TTAAGAGCTC TTCAAAGGCA
ATCCTACACA CACTACTTCT ATGAAGCTAC GGTTGGGGCT GGTCTTCCCA TTGTCAGCAC TTTACGTGGC CTTCTTGAAA
CTGGAGACAA AATATTGCAA ATTGAAGGGA TATTTAGTGG GACTTTGAGT TACATATTTA ATAACTTCAA GGATGGTCGA
GCTTTTAGTG AGGTAGTTGC TGAAGCAAAG GAAGCTGGTT ATACTGAGCC AGATCCAAGG GATGATTTGT CTGGAACAGA
TGTTGCTCGA AAGGTTATAA TTCTTGCTAG GGAATCTGGA TTAAAGCTAG AACTATCAAA TATTCCGGTT GAAAGCCTTG
TGCCAGAACC ACTACAAGTT TGTGCATCAG CTCAGGAGTT TATGCAAGAG CTATCAAAAT TTGATCAGGA GTTCACAAAG
AAACAAGAAG ATGCAGAGAA TGCCGGGGAA GTCTTGAGAT ATGTGGGAGT GGTGGACGTG ATTAATAGAA AAGGAGTGGT
AGAGCTACGA AGATACAAGA AGGATCATCC GTTTGCACAA TTATCTGGAT CTGATAACAT AATTGCATTT ACAACAAGAA
GGTACAAGGA TCAGCCTCTG ATAGTTCGTG GGCCAGGAGC TGGTGCTCAA GTCACAGCTG GTGGAATATT TTCTGATATT
TTACGACTTG CTTCATATCT TGGTGCTCCA TCATAAGCGT CAATCTGCGT GTATAATTTT GTATGATCTA TCTGCTTATC
TTGATTTCCT TAGTAGATTG TTTTAACTTA GTAATCTTGT TAACCCGTCT TTTTTATTGA TCTTTTGTTT GAAACATTAA
TAAGGGAATG GAGCAGAATT TAGTTAACCT TGATTGCGAG TTATATGTAA AGGAGAGAGA AATGAACAGA GAAATATTAT
AAAAAAGAGA TGTTTCTTTT ACATTCAATT TTTTATTTTA TTTTAAACAG ATGATACATT TTAGTCAA

>Vigan.01G214600.01
ATGGCATCCT TTTCTGCCGC CGTAGCTAAC TTCTCCAGCA TTTCGCCTAC TCAGTTATCG CTCTACCATC GCCATAGGCT
TTTCCAATCT CAATGCCGCC CCTTCTTCCT CTCGCGCTCT TCCCATTTCC TTCTGAAGGA TCTTACTTTA CCACGGGGAA
GAAAAACAAC AGACACCGTG ATATGCGCTT CGTTTACTGA TGTTACATCA AATGTGTCTT TGGAGGAAAA GCTACCTCCC
AAAGGAGAAA CTTGGTCTGT GCACAAATTT GGTGGAACCT GTGTGGGAAC CTCACAAAGG ATAAAGAATG TTGCAGAAAT
AATTCTTAAA GATGATTCTG AGAGAAAATT AGTGATTGTC TCTGCTATGT CGAAGGTGAC AGATATGATG TATGCCCTTA
TCCAAAAGGC TCAATCACGC GACGAGTCTT ATATATCTTC ATTGGATGCT GTTTTGGAGA AGCATAGTGC AACTGCACAT
GACATTCTTG AGGGAGATAG TCTTGCTAGT TTCTTGTCTA AGTTGCACAA TGATATTAGT AACCTGAAGG CGATGCTTCG
TGCAATATAC ATAGCTGGTC ATGCAACAGA GTCCTTTACA GATTTTGTTG TGGGACATGG GGAATTATGG TCTGCTCAGA
TGTTGTCTCT AGTTATTAGA AAGAAAGGGA TCGATTGCAA ATGGATGGAT ACAAGGGATG TCATTATTGT AAATCCTTCT
GGTTCTAATC AAGTTGATCC TGACTATTTG GAGTCTGAGC AAAGACTTGA AAAATGGTAC TCTTTGAATC CATGTAAGGT
AATCATTGCA ACTGGATTCA TTGCAAGCAC ACCTCAAAAC ATTCCTACCA CATTGAAGAG AGATGGAAGT GACTTCTCAG
CAGCAATTAT GGGTGCTCTA TTTAGGGCTC GTCAAGTCAC AATTTGGACA GATGTGGATG GTGTGTATAG TGCTGATCCT
AGAAAAGTTA GCGAGGCTGT GATTTTGAAG ACATTGTCTT ATCAAGAGGC ATGGGAAATG TCTTATTTTG GTGCAAATGT
CTTGCATCCC CGCACAATTA TTCCTGTGAT GAGATATGGT ATACCCATTA TGATAAGGAA CATTTTCAAC CTTTCTGCTC
CTGGAACAAA GATCTGCCAC CCTTCTGTTA ATGACAATGA AGATGGGCAG AACCTGCAAA ATTATGTCAA AGGATTTGCA
ACCATAGACA ACTTGGCACT CGTAAATGTC GAGGGAACTG GAATGGCTGG TGTTCCAGGT ACAGCCAGTG CTATTTTTGG
TGCAGTAAAA GATGTTGGAG CTAATGTTAT AATGATATCT CAGGCTAGTA GTGAGCATTC CGTTTGCTTT GCTGTTCCTG
AGAAAGAAGT AAAAGCTGTT GCCGAGGCAT TGCAATCAAG ATTTCGACAA GCTTTGGATA ACGGGCGTCT TTCTCAGGTT
GCGATTATCC CAAATTGTAG CATTCTAGCT GCAGTTGGCC AGAAGATGGC AAGCACCCCT GGAGTTAGCG CCTCCCTTTT
TAATGCATTG GCTAAGGCCA ATATAAATGT CCGTGCTATA GCACAAGGTT GTTCTGAGTA CAATATTACT GTTGTTGTGA
AGCGAGAGGA TTGTATAAAG GCTTTGCGAG CTGTTCATTC GAGATTTTAT CTCTCAAGAA CCACCATATC AATGGGCATT
ATTGGACCTG GACTAATTGG AAGTACACTA CTTGACCAGC TAAGGGATCA GGCCTCAATC CTAAAAGAAG AATTCAACAT
TGATTTGCGT GTAATGGGCA TACTAGGTTC AAAGTCAATG CTTCTTAGTG ATGCGGGCAT TGACTTAACT AGATGGAGAG
AACTTCGAGA GGAAAGAGGA GAAGCGGCTG ATTTGGAAAA ATTTGTTCAA CATGTACATG GAAATAATTT TATACCCAAC
ACGGCACTAG TCGACTGCAC AGCTGATTCT GTCATTGCTG GCTATTACTA TGAGTGGTTG CGCAAAGGAA TACATGTAGT
TACTCCTAAC AAGAAAGCAA ATTCAGGGCC ACTTGAGCAG TATTTGAGGT TAAGAGCTCT TCAAAGGCAA TCCTACACAC
ACTACTTCTA TGAAGCTACG GTTGGGGCTG GTCTTCCCAT TGTCAGCACT TTACGTGGCC TTCTTGAAAC TGGAGACAAA
ATATTGCAAA TTGAAGGGAT ATTTAGTGGG ACTTTGAGTT ACATATTTAA TAACTTCAAG GATGGTCGAG CTTTTAGTGA
GGTAGTTGCT GAAGCAAAGG AAGCTGGTTA TACTGAGCCA GATCCAAGGG ATGATTTGTC TGGAACAGAT GTTGCTCGAA
AGGTTATAAT TCTTGCTAGG GAATCTGGAT TAAAGCTAGA ACTATCAAAT ATTCCGGTTG AAAGCCTTGT GCCAGAACCA
CTACAAGTTT GTGCATCAGC TCAGGAGTTT ATGCAAGAGC TATCAAAATT TGATCAGGAG TTCACAAAGA AACAAGAAGA
TGCAGAGAAT GCCGGGGAAG TCTTGAGATA TGTGGGAGTG GTGGACGTGA TTAATAGAAA AGGAGTGGTA GAGCTACGAA
GATACAAGAA GGATCATCCG TTTGCACAAT TATCTGGATC TGATAACATA ATTGCATTTA CAACAAGAAG GTACAAGGAT
CAGCCTCTGA TAGTTCGTGG GCCAGGAGCT GGTGCTCAAG TCACAGCTGG TGGAATATTT TCTGATATTT TACGACTTGC
TTCATATCTT GGTGCTCCAT CATAA

>Vigan.01G214600.01
MASFSAAVAN FSSISPTQLS LYHRHRLFQS QCRPFFLSRS SHFLLKDLTL PRGRKTTDTV ICASFTDVTS NVSLEEKLPP
KGETWSVHKF GGTCVGTSQR IKNVAEIILK DDSERKLVIV SAMSKVTDMM YALIQKAQSR DESYISSLDA VLEKHSATAH
DILEGDSLAS FLSKLHNDIS NLKAMLRAIY IAGHATESFT DFVVGHGELW SAQMLSLVIR KKGIDCKWMD TRDVIIVNPS
GSNQVDPDYL ESEQRLEKWY SLNPCKVIIA TGFIASTPQN IPTTLKRDGS DFSAAIMGAL FRARQVTIWT DVDGVYSADP
RKVSEAVILK TLSYQEAWEM SYFGANVLHP RTIIPVMRYG IPIMIRNIFN LSAPGTKICH PSVNDNEDGQ NLQNYVKGFA
TIDNLALVNV EGTGMAGVPG TASAIFGAVK DVGANVIMIS QASSEHSVCF AVPEKEVKAV AEALQSRFRQ ALDNGRLSQV
AIIPNCSILA AVGQKMASTP GVSASLFNAL AKANINVRAI AQGCSEYNIT VVVKREDCIK ALRAVHSRFY LSRTTISMGI
IGPGLIGSTL LDQLRDQASI LKEEFNIDLR VMGILGSKSM LLSDAGIDLT RWRELREERG EAADLEKFVQ HVHGNNFIPN
TALVDCTADS VIAGYYYEWL RKGIHVVTPN KKANSGPLEQ YLRLRALQRQ SYTHYFYEAT VGAGLPIVST LRGLLETGDK
ILQIEGIFSG TLSYIFNNFK DGRAFSEVVA EAKEAGYTEP DPRDDLSGTD VARKVIILAR ESGLKLELSN IPVESLVPEP
LQVCASAQEF MQELSKFDQE FTKKQEDAEN AGEVLRYVGV VDVINRKGVV ELRRYKKDHP FAQLSGSDNI IAFTTRRYKD
QPLIVRGPGA GAQVTAGGIF SDILRLASYL GAPS*