GBrowse Details

Vigan.01G235100.01

Basic Information:
Name: Vigan.01G235100.01
Multiple alignment
Variant Information
Position: Chr01:31700793..31711794 (- strand)
Length: 11002
Functional Information:
Description: Similar to Uncharacterized protein. [G7LFG2, Medicago truncatula]
InterPro: Anticodon-binding domain (IPR019181)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:61.60,45.57,6.41,6.09,6.43,16.71,9.94,5.53
Arabidopsis thaliana homolog: AT1G24050.1
Automatic updates:
Name: NM_001248490 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306463 (LOC100306463), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:31700793..31704705 (- strand)
Length: 3913
Type: three_prime_UTR
Position: Chr01:31704706..31704756 (- strand)
Length: 51
Type: CDS
Position: Chr01:31708702..31708825 (- strand)
Length: 124
Type: CDS
Position: Chr01:31711139..31711219 (- strand)
Length: 81
Type: CDS
Position: Chr01:31711321..31711616 (- strand)
Length: 296
Type: CDS
Position: Chr01:31711617..31711794 (- strand)
Length: 178
Type: five_prime_UTR


>Vigan.01G235100.01
GCCCAATGAG GAGACCGATT TGGAGTTTTT ATGAAGAGTA GCCCAAATAA GGGAGGGTAT ACCAAGCCCT AAACAAGGTT
CCCAGTTGAA TATTGTCTGC AAGAAAGATT CAAGTCTTGT TTGGTGGAAG GAAGGGTAAA CTAGGAGGAA AGGGTAGGAA
GGAACAGAAA GCACAACAAT GGAGGGTGGC AACAGCAACA ACAACCCTGA GGACCTGGCG GTAGGGTGTT TGCTGTCGAT
CAGGACAACG TTGGGCGACG AATTCGAAGG TCAGGTTGTG ACCTTCGATC GACCCTCCAA CATCCTTGTA CTCCAGGAAC
CTTCCAAACA TGGCCCTCGT CGGAACATTA GGTTGCTCAA GGCTAATTAC ATCAAAGAGT TCACCTTTCT TGGCCAGGCC
GAAGACCCAC TTGATCCTTC CAACTGCTTT CTTGACCTCA CCGCTCTCCA AGCTAGGGAA GAAATTGCTA TCAGACAAGC
AGAGGCTGAT GCTGAGAGGA TTGGGGTTGG GGTTACCAGC GAGGCGCAGA GCATCTTCGA TGCTTTGTCC AAAACGCTTC
CAGTCCGCTG GGACAAGACA GTCATAGTTG TGATGAATGA CGTCCGCGTC AGCAGTCCTT ATCATCCTGA TTCTGTTGTT
GGAGGTACTC CTGCTGCAAA TGAGCGAGTG AAGAAAGTGC TTGAGTTTGA GAGGAAGAGG TTGCAACTTC GCAGTTCTGG
TGGTCAGTAA AGCTTCATAT TTGCATCCTT TTACGGTCAG GAAAGCGCCA CCCAGGAGTA AACATGATGG GTATGTTGCT
TTTAACAAAC CCTATACAAG AGGGTTTTCC AAGGCATATT CCTGACTTCA GATATCTTTT GATTATCTGT CTTGAGCTCT
CAAGTTCTGT CTTGCTTATG GAGTTCATTT GAGGTACTTG CTCCAGATTC TTCTTAGGAG TGAATGCTGA AGCATATGAT
GTATGGTGTG TTACACTTGG AAACCGAACA GGTGACTGGG TTTATATAAT TTGTCAGTTT GCTGTTGGGA AGTTTAACCA
ATTACAACGG GCTAACATGA ACTCAAAATG ACTTTAATTT GTTCCTTGTC TAATAATGCA AATGCTTCGG ATAAATGAAG
CTGATATACC TACCTGAAGC TTTCTAATTT TTTTTATTTC TTGTTTCTAA ATATTTATGT GGTATTATTT GTTTACTTAG
CTGTCCCTTC TATGATAAGT TTTATTGTTG TTGGTTTTTG GATTTTAATC TTCTGTGGAG AGATCTTTGG CGATATTTTA
TTGCATTTTG GGGTCAGATG GGAAAAATCT TTGGCAATAT TTCGATTGCA TTTTGAGGTC AAATGGGAAA ACATAAAGAG
ACACGGCTGG GGAAGTATTT TGTTCTGTTT TTTGGGGTAG GGTATGTATA ACATGCTTTC CGATTTCTTT TGAGATGATC
CTCAAACAGA AATTTATGAA ATAATAAATA CATTCCATTT CTTCAGTTCA TGTTTTGCAT CATTCTGTCT TGTTCTGAAT
TTGTCCTCTA TGTCTAGATT TGTAGGTTCC GGTCTTCGAT TTATGAATTG TGACTTTATT GTCTTTGAAT TGGTGTCACC
CTGTGTTTGG GTGTGATTTG GAGACGAAGT TGTCTTTTGT GGGTCAAGGT TCTGCTCTGA TTCAGTTGTA TCTGGTCTTT
GTTCTCTGTT CTATATGATG CCCATTTATG CCTAATTGTA TTGTTTCTCT CTCTCTCTCT CTCTCTCTCT CTTTTCATTT
AACAAATATT TTCTCTCTGG TTTCTGTATT TTCTTCATTT GGGCTCTATT TCCCAACCTA GAATCAGAGT GTTGGCCTCT
GCTGGAAATG AAAATTTCAT CATGCTGCAT CGCATGAGCT CAGTTTGGTC CTCTCTTTCT TCACTCCAAC TGCTCTCCCC
TCCCCACTTC TCCAAAACTC AGGATTTCTA CATTGCTATG GAGTTGACTG CCGTTCTAGC TCAGACTCTT AATGGTTTTT
TGGTCTGATT TCAGCAATGA TTTTTTTTTT CATTGAGATC TGGATGTGTG GTGTCTTGGA GCTTAGTGCT TTGTTTCTTG
AAGATTTTGT TTGAGTTCAC TTTGAGCCTT TGAATGTTCC CTTTTTTGGT CTTTCAAGTT TAGGTGAGTC ATATTTGACC
AATTGCAATT TTGGCTGTGA TGCACAAGGG TGGTCAAAAT TTATTGTCAT TCATCTTGTT GTTCTTGTTG TTTTCCCTGT
CTTTGGCAAG AACACGTGGT ATCCTTGCTT TTTTCAGGTC ACAATCCTAC AATTGCTGAG ATATGGATAT GGATAGCACT
TTCAATCTCA TCTGCCACAT CACCACCTCA TGGCAACCTC CTTGAGTTAG GTTGGGCCAA AGCTTAGGAG GAAGCAAGGA
GATGGTCCCT ATGATGGATA TGGTTGCGGA AATGAGTGAG AAAGGGGTGA TATGATGTGA AAATGATGGT GGTGTGGTGA
TAGGATCACG ACTTTTAGTG ATAGGATGAA GATGGTGTGT AGTTTGAAGG TTTAAGGAGA GGTTAGGCCA ACTCCATGAG
ATAGGTGACT AGAAGGGCCT CTAGGGTTGT TTAGTCTTGA TCAAGGAAGA ATGAGGTTAC AATTTGGCAG AATAACATTA
CTAATTTCTA AGATGAAATA CAAGGGTGGA GACACCTCTA TTTATAGGCC AAGGGTGTCT TCTTCTAACC CTAAAGGCAT
GATCTCCCAC CTTTGCTCTC ATTGGCCAAA AATGGGGCCT TCTAACCTCT CCAATGATGG GAGGAGATGT GGCCACTCAA
AACACAATCT TCTCCATTCC TAGAGTGCGA TGTGACCACT ACTAAAAGCA AATCCTCTCC AATGGTGGAG GGACATGTGG
CCACTACCAA AAAGAAAAAC TCTCCACTTT TAAGGTGCCA TGCGGCTACT TTTTAAAAAG TAAATCCTCT CTAATGGAAG
CATGACACAT GACACACTTT TCACTTGGTT TGGATATCTA ACTTAGGGAA AATCTCATGC TACTTAGGCC TTAATAAAGT
CTTAATCAAA CCTACACTAC ATGGCCGAAT ACAAGGCCTA AATCTTATAC TATTCACTTT TCTTCCATGA TGGCCCAAGT
AAAACACACC TTTGTTTCTT GTTCTATGGA TGGTTCTTTC TGGAGGAGCT TGACCATACT TCTAGTGGTT GGACCCTTGG
CTATGAGTTT GTCATCACCA CCTCCATGTC TTACAAAATT CTAAGAATCT GATGCACAAA ATCCTCTGCC TAAGATGTCG
TTTTGCTTTT ATCAGTGCTT CAATCAAGCT AGCACTATTT GTTCTCATGA TTTCTTGACT TGGTAGTATT GTTAGGGCTC
ATGATATCCT TGGATTGCTT GATTGACAAA ATAGTTATTT CATTTACAGT TATCATTGGT CTAATTTTCT CTTCCATTTT
GTTGACCTAT GATGTATATA TCATTTGAGG AAGGTCTAAT TAACATTATT TTGGTTTCGC TTCAAGTGCT TGTTTGATGA
ATCGTCTTTA TAATTGTGAA TGATATTACA AGCATGCATT TTGCTAGTTT TTGGTTTGAT TAATTCTTAT CTACACTTGG
TGCATGTATC ATTAGTGCTA CTTCTCTTTC TGTCATCTAA AAAGATTGCC ATCATTGCTA AGGACCAAAG GCCAAGATAT
TCCAATTGGT TCTAATGGGG GAACTCGTTG AAAATAGGAT TTTTTAAATA GTGGTGACTC GGAAGAATCT TTAGTAATGT
ATTACCCTCG GTAATATTAA AGGATGCAGT AAACATGTAC CCATGACACT CTTCAGAATT AGTGAAAGGC CTCGTTTTGG
TTATTCGTCA TCTTTGCTAA GCGTGATCTC TATTTTTTTT GTCAATTGGT GGTTTAAAAC TGTGTTAAGA GCTGTGTTGG
ACTTTTAGTC CTCAATGAAG ACATTTCAGC TGTAAAGGAT TGCTTCACAA GGTGTCTTTC ATGGAAGCTT CCATCCATGG
TGGTTAGATG AGAGCTTCTG CAACGCATTG ATATTTCTTT TGTTTTGTTT TTGTCTTGAT AGCGTTTAGT GTAACTTGTA
CAAGGTGGTT AAGCCTCTTT CCCAAGTTCA TCTTGTTGAT TACTCCCACA ATTATTTGGA ATTGCTAGTA TCTACCTTCC
ATCTTGTTGA GAAAGAGCTA GAAACATGGT TGGTTATAGG TATTGTTCGT TGAAGAGTTG ATAGGTGTTC ATTTTCAAAA
TGGTTCTTTA TATGGAAGTA TTTAGATAAA GAGATCCTAT GTGGTTTAAG CTCCAATGAT AAGGAAGTGT TTCTAAGATA
TTAAATCCAA ACGAAAGTAG AAGAATATCT GATGGTTTTT CAAGACTACT GGAAAAGGCT GTCATTTTTT TTTCATCTCT
TCTTGACTTA AGGCTAGTAG GTTTTCGACA AGTTCACTTT TACAAGATGT TCCTTCATAT GCTTCTCCTT CTCTTTTCCC
CCAAACAACA ATTGGGAGCT TTAGCATGCA TTTTCCAACA CTTCTCTTCG GTTTGTTATG ACCTATTAGA ATAAAGGAAC
CAGAAATCAA CAAGTCTGAA CCTAGGTAGT TGATACCTAT TATGGTATAA ATCAAGATAA ATTTTAGATC TCTATTCTAT
TTT

>Vigan.01G235100.01
ATGGAGGGTG GCAACAGCAA CAACAACCCT GAGGACCTGG CGGTAGGGTG TTTGCTGTCG ATCAGGACAA CGTTGGGCGA
CGAATTCGAA GGTCAGGTTG TGACCTTCGA TCGACCCTCC AACATCCTTG TACTCCAGGA ACCTTCCAAA CATGGCCCTC
GTCGGAACAT TAGGTTGCTC AAGGCTAATT ACATCAAAGA GTTCACCTTT CTTGGCCAGG CCGAAGACCC ACTTGATCCT
TCCAACTGCT TTCTTGACCT CACCGCTCTC CAAGCTAGGG AAGAAATTGC TATCAGACAA GCAGAGGCTG ATGCTGAGAG
GATTGGGGTT GGGGTTACCA GCGAGGCGCA GAGCATCTTC GATGCTTTGT CCAAAACGCT TCCAGTCCGC TGGGACAAGA
CAGTCATAGT TGTGATGAAT GACGTCCGCG TCAGCAGTCC TTATCATCCT GATTCTGTTG TTGGAGGTAC TCCTGCTGCA
AATGAGCGAG TGAAGAAAGT GCTTGAGTTT GAGAGGAAGA GGTTGCAACT TCGCAGTTCT GGTGGTCAGT AA

>Vigan.01G235100.01
MEGGNSNNNP EDLAVGCLLS IRTTLGDEFE GQVVTFDRPS NILVLQEPSK HGPRRNIRLL KANYIKEFTF LGQAEDPLDP
SNCFLDLTAL QAREEIAIRQ AEADAERIGV GVTSEAQSIF DALSKTLPVR WDKTVIVVMN DVRVSSPYHP DSVVGGTPAA
NERVKKVLEF ERKRLQLRSS GGQ*