GBrowse Details

Vigan.01G262500.01

Basic Information:
Name: Vigan.01G262500.01
Multiple alignment
Variant Information
Position: Chr01:37238102..37242465 (- strand)
Length: 4364
Functional Information:
Description: Similar to Phosphate transporter 3. [C3UZD9, Glycine max]
GO: Biological Process: transport (GO:0006810)
Biological Process: transmembrane transport (GO:0055085)
Cellular Component: membrane (GO:0016020)
Cellular Component: integral to membrane (GO:0016021)
Molecular Function: transporter activity (GO:0005215)
Molecular Function: transmembrane transporter activity (GO:0022857)
InterPro: General substrate transporter (IPR005828)
Sugar transporter, conserved site (IPR005829)
Major facilitator superfamily domain, general substrate transporter (IPR016196)
Major facilitator superfamily domain (IPR020846)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:32.93,0.04,1.58,22.79,0.18,1.32,0.69,2.94
Arabidopsis thaliana homolog: AT1G20860.1, AT1G76430.1
Automatic updates:
Name: NM_001254645 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max inorganic phosphate transporter 1-9 (PHT1-9), mRNA.
PubMed ID: 23510338 NCBI(pubmed)
22313769 NCBI(pubmed)
Status: Known Variant
Name: NM_001254678 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max probable inorganic phosphate transporter 1-9-like (PHT1-8), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001358461 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max inorganic phosphate transporter 1-8 (PHT1-8), mRNA.
PubMed ID: 23510338 NCBI(pubmed)
22313769 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr01:37238102..37238352 (- strand)
Length: 251
Type: three_prime_UTR
Position: Chr01:37238353..37239208 (- strand)
Length: 856
Type: CDS
Position: Chr01:37241166..37241450 (- strand)
Length: 285
Type: CDS
Position: Chr01:37241771..37242156 (- strand)
Length: 386
Type: CDS
Position: Chr01:37242157..37242465 (- strand)
Length: 309
Type: five_prime_UTR


>Vigan.01G262500.01
CCCAGCTTCC TACTTCATAG TCCTCATTTC TCTAGAACAA CTCACTTAAT CTGCCCCACA TCAATTTCCT CGCTACATAC
AACAAAAACT AATTGTTTTA GTTCCTACGT AGCACACAAG AAGCCGGAAT ACGCTAAAGC ACAAAAAAGG TGGCCCTTAT
CTCTTCATAA TCTAGCCATA AATGCCTACA CATTTATGTT CAGAGCAACC AAAGTCGTGA CCTAAGAGAC CATGTCGGCA
TGGTTGAAAA GTCTCATATA TGTTGTAAGG TAAATTAAGG ATCTAGCTTG AAGGGAATTG CAGAAGAAAA TGGCGAGGTT
GAGGGTGTTG TCTGAGCTTG ACACAGCAAG GACGCAGTAC TATCACTTCA AAGCCATCAT CATTGCAGGG ATGGGGCTCT
TCACCGATGC CTATGACCTT TTCTCAATCA CTCTCATCAT CAAGATGATG GGAAGGATAT ATTACGACCA CCGCAAGGGC
TTTCAGACCC CGCCGCTGGT CACCTCCGCC CTCGTTGCTA CCGCGCTTCT GGGCACCGCC GTCGGTCAGC TCCTCTTCGG
AAGGCTCGGC GACCTCAAGG GGCGCCGCCG AGTCTACGGA TTCTCCTTGC TGTTGATGGT CTTCAGCTCC TTGGCCTCCG
CCTTCTCCAT TTGCATAAGA AAAACCTGCG TTTTCGTCAC TCTTGGCTTC TTCAGGTTTA TGTTGGGGCT GGGGATTGGT
GGGGACTACC CTCTGTCTTC AACGATAATG TCGGAGTTTG CGAACAAGAA GACACGAGGG TCGTTCATAG CGGCGGTGTT
TTCGATGCAA GGGTTCGGCA TATTGGCGAG CTCAACCGTG ACGGTGGTGG TGTGTTCCAT TTTTCGTGCG GCCTCGAAGT
CGTCGGAGGC TGACGTTGCT TGGAGGTTGA TACTGATGCT GGGTTGCGTT CCGGCAGCCA TGACTTACTA CTGGCGCATG
ATGATGCCCG AAACTGCCAG GTACACAGCG TTAGTGGAGC ACAATGTGAT GCAAGCAGCA AAGGACATGG AGAAAGTTCT
TGATGTAAGA CTGAGCATGA TTGCAGAGGA ATACCCTTTG CCACCAATCC CACATCCCTA CCCTCTCTTT TCAAGGGAGT
TCTTCCGCCG CCATGGTCGT GACCTCTTTG CATGTTCTTC AACATGGTTC CTCGTCGACA TTGTCTTCTA CAGCCAAGTT
TTGTTCCAAA GTGAAATATA CAAACGCTAC CTCGACGAAA AGGGAAAAGT AGACATCTAT AAGGAGGCTA TTCACGTCGC
TTGGATCCAA GCCGTTATCA CAGTCTGTTC CACCATCCCC GGTTACTTCT TCTCTGTCTA CTTCATTGAC AGATGGGGAA
GGGTCAAAAT CCAAATGATG GGTTTTTTCT TCATGGCAGT CATCTTTTTC ATCATTGGAA TTCCCTATTA CACTTTTTGG
ACTACTCCGG ACCATGAAGA GAACAAATGG TTCATGGTTT TGTATGGCCT TGCTTTTTTC TTTGCCAACT TTGGCCCTAA
CACTACCACT TTCATAGTCC CGGCTGAGCT TTTTCCAGCC AGGTTTAGGT CAACTTGTCA TGGCATTTCT GGGGCAGCCG
GGAAGGTTGG GGCGATCATT GGGTCTGTGG GCTTTCTTTG GGCTTCTCAT AAAAAGAGGG AGTATGGATA CAGTAAGGGA
ATTGGGATGC AGGTTACCCT TATCATACTT GGAGGAGTGT GCTTATTGGG AATGGTGATC ACGTACTTTT TCACTAGGGA
AACCATGGGA AGGTCCTTGG AAGAGAATGA GGTTGATAGT CAGACCAATG AAGTTGAAGA ACATAATAAT CTTTGATTCC
TTGCTGGCTG GGTGCGTGCG TTTAAGGTTG TACGTGCATT GTGGTGAATC GTCATTTTTT GTTGATAAGT TTTGTCTTAT
TCTGTACACT TTCTGTTGAT AAGTAAAGGA TATTATAATG TAACATTTTG AAGTTATATC CAGCAGCCAT TCATGGAAGA
CTATTTGGTG ATTATTAATA CAAATCCTTG ATTTAGTGGA TAGTACACGG AAGATGTATG CATCAAATCT TACTATTGGA
AATAGAT

>Vigan.01G262500.01
ATGGCGAGGT TGAGGGTGTT GTCTGAGCTT GACACAGCAA GGACGCAGTA CTATCACTTC AAAGCCATCA TCATTGCAGG
GATGGGGCTC TTCACCGATG CCTATGACCT TTTCTCAATC ACTCTCATCA TCAAGATGAT GGGAAGGATA TATTACGACC
ACCGCAAGGG CTTTCAGACC CCGCCGCTGG TCACCTCCGC CCTCGTTGCT ACCGCGCTTC TGGGCACCGC CGTCGGTCAG
CTCCTCTTCG GAAGGCTCGG CGACCTCAAG GGGCGCCGCC GAGTCTACGG ATTCTCCTTG CTGTTGATGG TCTTCAGCTC
CTTGGCCTCC GCCTTCTCCA TTTGCATAAG AAAAACCTGC GTTTTCGTCA CTCTTGGCTT CTTCAGGTTT ATGTTGGGGC
TGGGGATTGG TGGGGACTAC CCTCTGTCTT CAACGATAAT GTCGGAGTTT GCGAACAAGA AGACACGAGG GTCGTTCATA
GCGGCGGTGT TTTCGATGCA AGGGTTCGGC ATATTGGCGA GCTCAACCGT GACGGTGGTG GTGTGTTCCA TTTTTCGTGC
GGCCTCGAAG TCGTCGGAGG CTGACGTTGC TTGGAGGTTG ATACTGATGC TGGGTTGCGT TCCGGCAGCC ATGACTTACT
ACTGGCGCAT GATGATGCCC GAAACTGCCA GGTACACAGC GTTAGTGGAG CACAATGTGA TGCAAGCAGC AAAGGACATG
GAGAAAGTTC TTGATGTAAG ACTGAGCATG ATTGCAGAGG AATACCCTTT GCCACCAATC CCACATCCCT ACCCTCTCTT
TTCAAGGGAG TTCTTCCGCC GCCATGGTCG TGACCTCTTT GCATGTTCTT CAACATGGTT CCTCGTCGAC ATTGTCTTCT
ACAGCCAAGT TTTGTTCCAA AGTGAAATAT ACAAACGCTA CCTCGACGAA AAGGGAAAAG TAGACATCTA TAAGGAGGCT
ATTCACGTCG CTTGGATCCA AGCCGTTATC ACAGTCTGTT CCACCATCCC CGGTTACTTC TTCTCTGTCT ACTTCATTGA
CAGATGGGGA AGGGTCAAAA TCCAAATGAT GGGTTTTTTC TTCATGGCAG TCATCTTTTT CATCATTGGA ATTCCCTATT
ACACTTTTTG GACTACTCCG GACCATGAAG AGAACAAATG GTTCATGGTT TTGTATGGCC TTGCTTTTTT CTTTGCCAAC
TTTGGCCCTA ACACTACCAC TTTCATAGTC CCGGCTGAGC TTTTTCCAGC CAGGTTTAGG TCAACTTGTC ATGGCATTTC
TGGGGCAGCC GGGAAGGTTG GGGCGATCAT TGGGTCTGTG GGCTTTCTTT GGGCTTCTCA TAAAAAGAGG GAGTATGGAT
ACAGTAAGGG AATTGGGATG CAGGTTACCC TTATCATACT TGGAGGAGTG TGCTTATTGG GAATGGTGAT CACGTACTTT
TTCACTAGGG AAACCATGGG AAGGTCCTTG GAAGAGAATG AGGTTGATAG TCAGACCAAT GAAGTTGAAG AACATAATAA
TCTTTGA

>Vigan.01G262500.01
MARLRVLSEL DTARTQYYHF KAIIIAGMGL FTDAYDLFSI TLIIKMMGRI YYDHRKGFQT PPLVTSALVA TALLGTAVGQ
LLFGRLGDLK GRRRVYGFSL LLMVFSSLAS AFSICIRKTC VFVTLGFFRF MLGLGIGGDY PLSSTIMSEF ANKKTRGSFI
AAVFSMQGFG ILASSTVTVV VCSIFRAASK SSEADVAWRL ILMLGCVPAA MTYYWRMMMP ETARYTALVE HNVMQAAKDM
EKVLDVRLSM IAEEYPLPPI PHPYPLFSRE FFRRHGRDLF ACSSTWFLVD IVFYSQVLFQ SEIYKRYLDE KGKVDIYKEA
IHVAWIQAVI TVCSTIPGYF FSVYFIDRWG RVKIQMMGFF FMAVIFFIIG IPYYTFWTTP DHEENKWFMV LYGLAFFFAN
FGPNTTTFIV PAELFPARFR STCHGISGAA GKVGAIIGSV GFLWASHKKR EYGYSKGIGM QVTLIILGGV CLLGMVITYF
FTRETMGRSL EENEVDSQTN EVEEHNNL*