GBrowse Details

Vigan.01G306400.01

Basic Information:
Name: Vigan.01G306400.01
Multiple alignment
Variant Information
Position: Chr01:43415825..43421965 (- strand)
Length: 6141
Functional Information:
Description: Similar to Uncharacterized protein. [K7MCV9, Glycine max]
GO: Biological Process: cation transport (GO:0006812)
Biological Process: phospholipid transport (GO:0015914)
Cellular Component: integral to membrane (GO:0016021)
Molecular Function: nucleotide binding (GO:0000166)
Molecular Function: magnesium ion binding (GO:0000287)
Molecular Function: phospholipid-translocating ATPase activity (GO:0004012)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: cation-transporting ATPase activity (GO:0019829)
Molecular Function: metal ion binding (GO:0046872)
InterPro: Cation-transporting P-type ATPase (IPR001757)
Cation-transporting P-type ATPase, subfamily IV (IPR006539)
P-type ATPase, A domain (IPR008250)
P-type ATPase, phosphorylation site (IPR018303)
HAD-like domain (IPR023214)
P-type ATPase, cytoplasmic domain N (IPR023299)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:2.24,2.90,5.00,4.28,5.37,1.72,10.19,4.94
Arabidopsis thaliana homolog: AT1G13210.1, AT1G17500.1, AT1G26130.2, AT1G54280.1, AT1G59820.1, AT1G68710.1, AT1G72700.1, AT3G13900.1, AT3G25610.1, AT3G27870.1, AT5G04930.1
Automatic updates:
Name: PV092045 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max isolate GmALA21 phospholipid-translocating ATPase (ALAs) mRNA, partial cds.
PubMed ID: -
Status: Known Variant
Name: PV092054 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max isolate GmALA25 phospholipid-translocating ATPase (ALAs) mRNA, partial cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:43415825..43416097 (- strand)
Length: 273
Type: three_prime_UTR
Position: Chr01:43416098..43416317 (- strand)
Length: 220
Type: CDS
Position: Chr01:43417104..43417562 (- strand)
Length: 459
Type: CDS
Position: Chr01:43417717..43417936 (- strand)
Length: 220
Type: CDS
Position: Chr01:43418100..43418223 (- strand)
Length: 124
Type: CDS
Position: Chr01:43418306..43419011 (- strand)
Length: 706
Type: CDS
Position: Chr01:43419342..43419648 (- strand)
Length: 307
Type: CDS
Position: Chr01:43419756..43421271 (- strand)
Length: 1516
Type: CDS
Position: Chr01:43421272..43421965 (- strand)
Length: 694
Type: five_prime_UTR


>Vigan.01G306400.01
AATTAGGCAG CTGTTGGAGG TAACCATGGC TGGCTGACTT GTTAATTCTT TCTTCCTTGC ATTTGCCGTT CTTTCTCTCT
CTACAATGCC TTTGACCTTT TGCCATATCG CACCCTCTCT CTCACCAACA CGCTTCTTCC TCTGCAGCCA CGACCACCGT
CACGATTGCA CCTTCGCCAC GTTACCCTTT TCTCCTGACA CCCTTTTCCA CCCAACTCAA GAAAAACACC GCCACTCACC
TCTCAATTTC CACCACCTTC ACTTATCTCT TCACATTTCC CACATCTCTA GACACTTCTC GTGATTCCCG TTTTTCTGGG
TACCTTTTTT TACAACGCTT TTTATTCTGT TTCAAACTCG TGCGGTCCTT TTCGTTTGGG TTCTTGTTCT CTGACAATTC
TGTTCCGGGA AATGTCAGAC ATACGTAAAA TGTGATCAAG AGATTTGAAC CGTGTTTTCG TCACGTTGTA AGGACTAATC
TCTTATTTGT GAGTCAACTT CACGAGTTTT TGGGAATTGC GTTGTCGGGT TTCATGTTTT CTTTTTCTCG GTGGTTTTTG
GATCATGGGT TTTTGAGGTT TGTCACCTTC TGATCCCTTT TTCAATACCA ACCCCTTACA CTTGAGTTTC TTGAAGTTTG
GAATTTCCCA AGATCTAAAT GACTTGAAAG TGTTATCTTT CAAGGACCAC TGTGATGGAA CCGGGAACCC CATTAGAGAG
TTCTTCCAAT TTTGACTCTT TAATGTTTAA TTCATCATCA CACAGAAGTA CCGGGTCCAT TCAGTCCAGG AGTTCTGGTG
TTAACAACTC CACCAGGGAA GTGAGTTTTG GCCACTTAGG ATCCAAGCCA GCGAGATATG GGTCAACGGG TGCTGATTCC
GAGTTTCTCA GTATGTCTCA GAAGGAAATA CGTGATGAGG ATGCAAGGTT GGTCTATGTT GATGATCCTG AGAAGACAAA
TGAAAAGCTT GAATTTGCAG GGAATTCGAT TCTTACTGGA AAGTACTCCA TCCTCACCTT TCTCCCAAGG AATTTGTTTG
AACAGTTTCA TAGAGTTGCT TATATTTACT TCCTTGCAAT TGCCATTCTT AATCAGCTCC CTCAGTTAGC TGTTTTTGGA
AGGGGTGTTT CCATTATGCC ATTGGCCATT GTGCTTCTGG TTACTGCTGT GAAGGATGCA TTTGAGGACT GGAGGAGGCA
CAAGTCTGAC AAAATTGAGA ACAACAGGTT CGGATTGGTT TTGGTTAATG ATCAGTTTGT GGAGAAGAAG TGGAAGCACA
TTAGAGTTGG GGAAGTTATT AAAATTAGAG CAAATGAAAC CATTCCTTCT GATGTTGTGC TGCTCTCGAC TAGTGACCCC
ACTGGGGTTG CGTATGTGCA GACTCTTAAT CTGGATGGAG AGTCTAATTT GAAGACTAGG TATGCAAAGC AAGAGACTCA
ATCTAAGTTG CCAGAAAAGG AGAAGTTAAA TCTGTTGATT AAGTGTGAGA AACCCAATAG GAATATATAT GGGTTTCAGG
GTAATATTGA AGTTGATGGA AAAAGGTTGT CTCTTGGATC CTCTAACATT GTTCTTAGAG GCTGTGAGCT CAAGAATACC
AATTGGGCAT TGGGAGTTGC CGTGTATTGC GGCCCTGAGA CCAAAGCGAT GCTCAACAGC TCAGGAGCTC CATCCAAAAG
GAGTCTTCTT GAGACTCGCA TGAACTCTGA GATCATTATG CTTTCTTTCT TTCTTATAGC TTTATGTGCA GTGACCTCAG
TTTGTGCTGC TGTTTGGTTA AAGCGCCACA AGGATGAGTT GAATCTCTCA CCTTATTATA GGAAGCTGGA TTTTTCAAAG
GGGGAAGAGG ACAACTATAA ATATTATGGA TGGGGACCGG AAATTGTTTT CACTTTCCTC ATGTCAGTCA TAGTGTACCA
GGTTATGATT CCCATATCCT TGTACATTTC GATGGAGCTT GTCCGTGTTG GTCAGGCATA CTTCATGATC GGAGATTCGA
GAATGTATGA TAAGGCAACA GAGTCAAGAT TTCAGTGCAG AGCTTTGAAT ATTAACGAAG ATTTAGGCCA AATTAAATAT
GTCTTTTCTG ATAAAACTGG CACACTGACT GAGAACAAGA TGGAGTTTAA ATGCGCAAGC ATCTTGGGGT TTGATTACAG
TTCAACGGCT GCCAATCTTG AGAATGAGCA AGTTGAATAC TCTGTTCAAG CGGATGGGAC GGTCTTTAAG CCAAAGATGA
TGGTGAAAGT TAATCAAGAG CTTTTGCAAT TATCAAAGAG TGGATTTACA AATGAAGAGG GGAAACAGAT TTATGATTTC
TTTCTAGCAT TGGCAGCCTG CAATACCATT GTGCCTCTTG TTGTTGACAC ATCCGATCCT ATGGTCAAGC TGATAGATTA
CCAAGGGGAA TCACCGGATG AGCAGGCATT GACTTATGCT GCCGCTGCGT ATGGTTTTAT GCTAATTGAA CGAACCTCAG
GTCACATAGT GCTTGATATT CGAGGAGAAA GGAAAAAGTT CAATGTCTTA GGTTTGCATG AATTTGATAG TGATCGAAAA
AGGATGTCAG TTATACTGGG GTACAGTGAC AATTGTGTGA AACTTTTTGT TAAAGGGGCA GATACATCCA TGCTTAGATT
GATTGACAAA TCATTGAACA CAGACATACT ACAAGCAACC GAAACCCATC TTCGTTCTTA TTCCTCTGTG GGTTTGAGGA
CACTTGTTGT TGGGATCCGG GACTTAGATG CTTCAGAATT TGAGCAATGG CACACTGCCT TTGAGGTAGC AAGTACTGCT
TTGATGGGTA GGGCAGCTTT GCTTCGCAAG GTCGCTATCA ATATAGAGAA GAATCTCTGC ATATTGGGTG CAACTGCCAT
TGAAGATAAA CTGCAGCAAG GTGTGCCAGA ATCTATTGAG TCTCTAAGGA CTGCAGGTAT TAAAGTATGG GTCTTGACTG
GGGACAAACA GGAAACTGCC ATATCTATTG GATACTCCTC TAAGCTCCTA ACGAGCAGCA TGATTCAAAT TATAATTAAT
ACCAACAATA GAGAATCATG TAGAAGACGT TTACAAGATG CCCTTGTCAT GTCTAGGCAA AACATGACTG TGCCTAGGGT
TACTCACAAT TCAGGAGGAA GTTCAGGATC TGTTTTAACT CTAGCCTTGA TTATTGATGG TACCAGCCTT GTTTATATTC
TTGACAGCGA GCTTGAAGAT GAATTCTTTC AACTTGCAAT TAGATGTTCT GTTGTTCTCT GTTGTCGAGT GGCTCCACTA
CAGAAAGCTG GGATTGTTGC CCTTGTGAAG AAGAGGACAG ATGACATGAC TCTAGCCATT GGAGATGGTG CTAATGATGT
ATCGATGATC CAAATGGCTG ATATTGGAGT TGGAATCAGT GGACAGGAAG GTCGGCAAGC TGTAATGGCT TCAGATTTTG
CAATGGGGCA GTTTAGGTTT TTAGTTCCTC TCTTGTTGGT ACATGGACAT TGGAATTACC AACGACTGGG TTACATGATA
ATATACAACT TTTACAGAAA TGCTATCTTT GTTCTTGTCT TATTTTGGTA TGTGCTCTTT ACTGCCTTCA CATTGACAAC
AGCTATAAAT GAATGGAGCA GCATGCTATA CTCAATAATC TACACTGCAT TGCCAACTAT TGTTGTTGGT ATTCTCGACA
AGGATCTTAG TAAAAGGACT CTCCTAAAGA ATCCTCAGCT TTATGGGGCC GGGCTGAGAA ATGAGGCCTA CAACAAAAAG
CTGTTTTGGT TGACAATGGC CGATACTTTG TGGCAAAGCA TTGCTGTCTT CTTTGCTCCC CTTATTGCAT ATTGGGGAAC
CACTGTAGAC GTAGCAAGCA TAGGTGACCT TTGGACTCTT GCAGTAGTTA TTTTGGTTAA TTTGCATCTG GCCATGGATG
TCATCAGGTG GAATTGGATT ACTCATGCAG CCATTTGGGG CTCTATTGTT GCAACTTTCA TATCTGTCAT GGTTATTGAT
GCTATACCAG CCTTTCCTGG TTACTGGGCT ATCTTTGATG TTGGAGGCAC TGCATTGTTC TGGTTATGTT TGGTTGGAAT
TGTAATAGCC GCATTACTTC CCAGATTAGT TGTAAAATAC GTTCACCAGT ATTATTTTCC CAGTGATATT CAGATTTCAA
GAGAAACTGA GAAGTTTGGG AATCCAAGAG ACAATGGAGG AAGACAGATA GAAATGCTTC CTGTTTCAGA TGGTCCAGTA
AGATAGCACA TGTTAGCTTG TTCCCTTTAC ACGATATCTT TTCTTTTGCA AAGTTACATA TTCTTTAGGC TAAGTCACAG
TGTTGCAGTT GGTTGCCAGA TTTCATTGTT TCTATCCGAA GGATGGAGTT TTTGTTCACT TCAGAAGCTT CTTTTGTTGC
TATTATTGTG TTGATATATT AGCTTGTTGT AAATTAAAAA TATTATAGCA GATAAAGTAC AAAGGTTGAT TACATGTGAT
AGTTTAAATT TATACATCAA GAGTTTTATT CATTTCTTG

>Vigan.01G306400.01
ATGGAACCGG GAACCCCATT AGAGAGTTCT TCCAATTTTG ACTCTTTAAT GTTTAATTCA TCATCACACA GAAGTACCGG
GTCCATTCAG TCCAGGAGTT CTGGTGTTAA CAACTCCACC AGGGAAGTGA GTTTTGGCCA CTTAGGATCC AAGCCAGCGA
GATATGGGTC AACGGGTGCT GATTCCGAGT TTCTCAGTAT GTCTCAGAAG GAAATACGTG ATGAGGATGC AAGGTTGGTC
TATGTTGATG ATCCTGAGAA GACAAATGAA AAGCTTGAAT TTGCAGGGAA TTCGATTCTT ACTGGAAAGT ACTCCATCCT
CACCTTTCTC CCAAGGAATT TGTTTGAACA GTTTCATAGA GTTGCTTATA TTTACTTCCT TGCAATTGCC ATTCTTAATC
AGCTCCCTCA GTTAGCTGTT TTTGGAAGGG GTGTTTCCAT TATGCCATTG GCCATTGTGC TTCTGGTTAC TGCTGTGAAG
GATGCATTTG AGGACTGGAG GAGGCACAAG TCTGACAAAA TTGAGAACAA CAGGTTCGGA TTGGTTTTGG TTAATGATCA
GTTTGTGGAG AAGAAGTGGA AGCACATTAG AGTTGGGGAA GTTATTAAAA TTAGAGCAAA TGAAACCATT CCTTCTGATG
TTGTGCTGCT CTCGACTAGT GACCCCACTG GGGTTGCGTA TGTGCAGACT CTTAATCTGG ATGGAGAGTC TAATTTGAAG
ACTAGGTATG CAAAGCAAGA GACTCAATCT AAGTTGCCAG AAAAGGAGAA GTTAAATCTG TTGATTAAGT GTGAGAAACC
CAATAGGAAT ATATATGGGT TTCAGGGTAA TATTGAAGTT GATGGAAAAA GGTTGTCTCT TGGATCCTCT AACATTGTTC
TTAGAGGCTG TGAGCTCAAG AATACCAATT GGGCATTGGG AGTTGCCGTG TATTGCGGCC CTGAGACCAA AGCGATGCTC
AACAGCTCAG GAGCTCCATC CAAAAGGAGT CTTCTTGAGA CTCGCATGAA CTCTGAGATC ATTATGCTTT CTTTCTTTCT
TATAGCTTTA TGTGCAGTGA CCTCAGTTTG TGCTGCTGTT TGGTTAAAGC GCCACAAGGA TGAGTTGAAT CTCTCACCTT
ATTATAGGAA GCTGGATTTT TCAAAGGGGG AAGAGGACAA CTATAAATAT TATGGATGGG GACCGGAAAT TGTTTTCACT
TTCCTCATGT CAGTCATAGT GTACCAGGTT ATGATTCCCA TATCCTTGTA CATTTCGATG GAGCTTGTCC GTGTTGGTCA
GGCATACTTC ATGATCGGAG ATTCGAGAAT GTATGATAAG GCAACAGAGT CAAGATTTCA GTGCAGAGCT TTGAATATTA
ACGAAGATTT AGGCCAAATT AAATATGTCT TTTCTGATAA AACTGGCACA CTGACTGAGA ACAAGATGGA GTTTAAATGC
GCAAGCATCT TGGGGTTTGA TTACAGTTCA ACGGCTGCCA ATCTTGAGAA TGAGCAAGTT GAATACTCTG TTCAAGCGGA
TGGGACGGTC TTTAAGCCAA AGATGATGGT GAAAGTTAAT CAAGAGCTTT TGCAATTATC AAAGAGTGGA TTTACAAATG
AAGAGGGGAA ACAGATTTAT GATTTCTTTC TAGCATTGGC AGCCTGCAAT ACCATTGTGC CTCTTGTTGT TGACACATCC
GATCCTATGG TCAAGCTGAT AGATTACCAA GGGGAATCAC CGGATGAGCA GGCATTGACT TATGCTGCCG CTGCGTATGG
TTTTATGCTA ATTGAACGAA CCTCAGGTCA CATAGTGCTT GATATTCGAG GAGAAAGGAA AAAGTTCAAT GTCTTAGGTT
TGCATGAATT TGATAGTGAT CGAAAAAGGA TGTCAGTTAT ACTGGGGTAC AGTGACAATT GTGTGAAACT TTTTGTTAAA
GGGGCAGATA CATCCATGCT TAGATTGATT GACAAATCAT TGAACACAGA CATACTACAA GCAACCGAAA CCCATCTTCG
TTCTTATTCC TCTGTGGGTT TGAGGACACT TGTTGTTGGG ATCCGGGACT TAGATGCTTC AGAATTTGAG CAATGGCACA
CTGCCTTTGA GGTAGCAAGT ACTGCTTTGA TGGGTAGGGC AGCTTTGCTT CGCAAGGTCG CTATCAATAT AGAGAAGAAT
CTCTGCATAT TGGGTGCAAC TGCCATTGAA GATAAACTGC AGCAAGGTGT GCCAGAATCT ATTGAGTCTC TAAGGACTGC
AGGTATTAAA GTATGGGTCT TGACTGGGGA CAAACAGGAA ACTGCCATAT CTATTGGATA CTCCTCTAAG CTCCTAACGA
GCAGCATGAT TCAAATTATA ATTAATACCA ACAATAGAGA ATCATGTAGA AGACGTTTAC AAGATGCCCT TGTCATGTCT
AGGCAAAACA TGACTGTGCC TAGGGTTACT CACAATTCAG GAGGAAGTTC AGGATCTGTT TTAACTCTAG CCTTGATTAT
TGATGGTACC AGCCTTGTTT ATATTCTTGA CAGCGAGCTT GAAGATGAAT TCTTTCAACT TGCAATTAGA TGTTCTGTTG
TTCTCTGTTG TCGAGTGGCT CCACTACAGA AAGCTGGGAT TGTTGCCCTT GTGAAGAAGA GGACAGATGA CATGACTCTA
GCCATTGGAG ATGGTGCTAA TGATGTATCG ATGATCCAAA TGGCTGATAT TGGAGTTGGA ATCAGTGGAC AGGAAGGTCG
GCAAGCTGTA ATGGCTTCAG ATTTTGCAAT GGGGCAGTTT AGGTTTTTAG TTCCTCTCTT GTTGGTACAT GGACATTGGA
ATTACCAACG ACTGGGTTAC ATGATAATAT ACAACTTTTA CAGAAATGCT ATCTTTGTTC TTGTCTTATT TTGGTATGTG
CTCTTTACTG CCTTCACATT GACAACAGCT ATAAATGAAT GGAGCAGCAT GCTATACTCA ATAATCTACA CTGCATTGCC
AACTATTGTT GTTGGTATTC TCGACAAGGA TCTTAGTAAA AGGACTCTCC TAAAGAATCC TCAGCTTTAT GGGGCCGGGC
TGAGAAATGA GGCCTACAAC AAAAAGCTGT TTTGGTTGAC AATGGCCGAT ACTTTGTGGC AAAGCATTGC TGTCTTCTTT
GCTCCCCTTA TTGCATATTG GGGAACCACT GTAGACGTAG CAAGCATAGG TGACCTTTGG ACTCTTGCAG TAGTTATTTT
GGTTAATTTG CATCTGGCCA TGGATGTCAT CAGGTGGAAT TGGATTACTC ATGCAGCCAT TTGGGGCTCT ATTGTTGCAA
CTTTCATATC TGTCATGGTT ATTGATGCTA TACCAGCCTT TCCTGGTTAC TGGGCTATCT TTGATGTTGG AGGCACTGCA
TTGTTCTGGT TATGTTTGGT TGGAATTGTA ATAGCCGCAT TACTTCCCAG ATTAGTTGTA AAATACGTTC ACCAGTATTA
TTTTCCCAGT GATATTCAGA TTTCAAGAGA AACTGAGAAG TTTGGGAATC CAAGAGACAA TGGAGGAAGA CAGATAGAAA
TGCTTCCTGT TTCAGATGGT CCAGTAAGAT AG

>Vigan.01G306400.01
MEPGTPLESS SNFDSLMFNS SSHRSTGSIQ SRSSGVNNST REVSFGHLGS KPARYGSTGA DSEFLSMSQK EIRDEDARLV
YVDDPEKTNE KLEFAGNSIL TGKYSILTFL PRNLFEQFHR VAYIYFLAIA ILNQLPQLAV FGRGVSIMPL AIVLLVTAVK
DAFEDWRRHK SDKIENNRFG LVLVNDQFVE KKWKHIRVGE VIKIRANETI PSDVVLLSTS DPTGVAYVQT LNLDGESNLK
TRYAKQETQS KLPEKEKLNL LIKCEKPNRN IYGFQGNIEV DGKRLSLGSS NIVLRGCELK NTNWALGVAV YCGPETKAML
NSSGAPSKRS LLETRMNSEI IMLSFFLIAL CAVTSVCAAV WLKRHKDELN LSPYYRKLDF SKGEEDNYKY YGWGPEIVFT
FLMSVIVYQV MIPISLYISM ELVRVGQAYF MIGDSRMYDK ATESRFQCRA LNINEDLGQI KYVFSDKTGT LTENKMEFKC
ASILGFDYSS TAANLENEQV EYSVQADGTV FKPKMMVKVN QELLQLSKSG FTNEEGKQIY DFFLALAACN TIVPLVVDTS
DPMVKLIDYQ GESPDEQALT YAAAAYGFML IERTSGHIVL DIRGERKKFN VLGLHEFDSD RKRMSVILGY SDNCVKLFVK
GADTSMLRLI DKSLNTDILQ ATETHLRSYS SVGLRTLVVG IRDLDASEFE QWHTAFEVAS TALMGRAALL RKVAINIEKN
LCILGATAIE DKLQQGVPES IESLRTAGIK VWVLTGDKQE TAISIGYSSK LLTSSMIQII INTNNRESCR RRLQDALVMS
RQNMTVPRVT HNSGGSSGSV LTLALIIDGT SLVYILDSEL EDEFFQLAIR CSVVLCCRVA PLQKAGIVAL VKKRTDDMTL
AIGDGANDVS MIQMADIGVG ISGQEGRQAV MASDFAMGQF RFLVPLLLVH GHWNYQRLGY MIIYNFYRNA IFVLVLFWYV
LFTAFTLTTA INEWSSMLYS IIYTALPTIV VGILDKDLSK RTLLKNPQLY GAGLRNEAYN KKLFWLTMAD TLWQSIAVFF
APLIAYWGTT VDVASIGDLW TLAVVILVNL HLAMDVIRWN WITHAAIWGS IVATFISVMV IDAIPAFPGY WAIFDVGGTA
LFWLCLVGIV IAALLPRLVV KYVHQYYFPS DIQISRETEK FGNPRDNGGR QIEMLPVSDG PVR*