GBrowse Details

Vigan.01G310200.01

Basic Information:
Name: Vigan.01G310200.01
Multiple alignment
Variant Information
Position: Chr01:43898542..43906840 (+ strand)
Length: 8299
Functional Information:
Description: Similar to Uncharacterized protein. [I1L4N0, Glycine max]
GO: Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747)
InterPro: Diacylglycerol acyltransferase (IPR007130)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:166.08,92.09,40.84,29.12,21.03,45.14,20.34,37.17
Automatic updates:
Name: LC533835 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max cv. Jidadou5 GmDGAT2D-like a mRNA for diacylglycerol O-acyltransferase 2D-like protein, complete cds.
PubMed ID: -
Status: Known Variant
Name: LC533836 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max cv. Jidadou5 GmDGAT2D-like b mRNA for diacylglycerol O-acyltransferase 2D-like protein, complete cds.
PubMed ID: -
Status: Known Variant
Name: MT333744 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max DGAT2D-like protein mRNA, complete cds.
PubMed ID: 32732347 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr01:43898542..43898725 (+ strand)
Length: 184
Type: five_prime_UTR
Position: Chr01:43898726..43898946 (+ strand)
Length: 221
Type: CDS
Position: Chr01:43899023..43899097 (+ strand)
Length: 75
Type: CDS
Position: Chr01:43899264..43899349 (+ strand)
Length: 86
Type: CDS
Position: Chr01:43903726..43903832 (+ strand)
Length: 107
Type: CDS
Position: Chr01:43903915..43904070 (+ strand)
Length: 156
Type: CDS
Position: Chr01:43905209..43905295 (+ strand)
Length: 87
Type: CDS
Position: Chr01:43905498..43905595 (+ strand)
Length: 98
Type: CDS
Position: Chr01:43906132..43906219 (+ strand)
Length: 88
Type: CDS
Position: Chr01:43906495..43906596 (+ strand)
Length: 102
Type: CDS
Position: Chr01:43906597..43906840 (+ strand)
Length: 244
Type: three_prime_UTR


>Vigan.01G310200.01
TATCTCACGA AACTGAAAAA CTAAAATAAC AACAAATTAT GCACGAACGA GACAAGAAGT CGATGGAAAC TCCGAGACCA
ACCCACATGA CATTTTTACC CCTTACACTT TCCCCAATTT ACACCAAGTC CCTCCCTCCC TTCATAAGAA TGCGCTTCCT
CCTTCCCTCA TTGCCTATCA GACCATGCAG CGCGCGACGG CGGTCAATGA CCAACCACGG CGGAGCTCCG GCCCAGCGGC
GGCGGATGGA GAGAAGGTCT TCAGGGGGGA TGAGGAGTTC AGTTACGCCT CATCGAACTA TTTGAAGACG ATTTTTGCCC
TGGCGCTGTG GCTCGGAACC TTTCATCTCA ACGCAGGGTT GATTCTCCTC ACGCTTCTCG TCCTCTCTCT CAGCCAAGCA
CTCTTGCTTA TAGGTTTGCT TCTCGTGTTG ATGCTGATTC CCATTGATGA AAATAGCAAA TTCGGTCGAA AATTATCCAG
GTACATATGC AAGCACGTTT GCAGTTACTT TCCCGTCATT CTTCATGTGG AAGATATGAA GGCCTTTCAT CCCAATCGTG
CTTATGTTTT TGGCTATGAA CCACATTCAG TTTTTCCAAT TGGAGTTGTT GCATTAGCTG ACAACACAGG TTTTATGCCT
CTTCCCAAGA TAAAAGTTCT TGCTAGCAAT GCGGTTTTTT ACACACCTTT CTTGAGACAC ATATGGACTT GGTTGGGTCT
GGCTCCAGCG ACAAGGAAAA GGTTTGCCGC TCTGTTGGAT GCTGGCTACA GTTGTATCTT AATACCTGGT GGAGTTCAAG
AAACATTTCT CATGGAGCAT GGTTCTGAGA TTGTCTTTCT TAAAGCAAGG AGAGGATTTG TGCGCATAGC AATGGAGAAG
GGCAAACCCC TGGTTCCAGT TTTCTGCTTT GGGCAGTCAA ATGCCTATAA GTGGTGGAAA CCAGGTGGGA AGCTATTTCT
GAATTTTTCG AGGGCTGTCA AGTTCACCCC AATATATTTT TGGGGAATTT TCGGATCTCC GATACCCTTT AAACATCCAC
TGCATGTGGT GGTGGGTAGA CCAATTGAAC TCGAGAAAAA TCCCGAGCCA ACTCCTGAGG AGGTTGCCAA AATACATAGC
CAGTTTGTTG AAGCACTTCA AGGTCTATTT GAACGACACA AAGCTCGAGC TGGATATCCA GACCTTGAGT TGAGAATTGT
TTGATAAGGT TGTAATTTGG ACCTCTATTT TCATGGGGTA ATTACACTTA TCTCTTAGGA TAGCCTGTAT TTGGGAGTTT
TGAAGATGGA GTGGGGTGAG AGGTTCATAA TTAATGGAAT GAGGTAAAAA AAATACTCTT GTTTTTTAGA AGCGGTTGTC
TCTGCTGTTT CAAAGTCAGT GGTTACAAGT CATATTGTAA ATCATAAATT TAATTCCCAA TTATAAGTCA GAACAATTTA
TATCAGAT

>Vigan.01G310200.01
ATGCAGCGCG CGACGGCGGT CAATGACCAA CCACGGCGGA GCTCCGGCCC AGCGGCGGCG GATGGAGAGA AGGTCTTCAG
GGGGGATGAG GAGTTCAGTT ACGCCTCATC GAACTATTTG AAGACGATTT TTGCCCTGGC GCTGTGGCTC GGAACCTTTC
ATCTCAACGC AGGGTTGATT CTCCTCACGC TTCTCGTCCT CTCTCTCAGC CAAGCACTCT TGCTTATAGG TTTGCTTCTC
GTGTTGATGC TGATTCCCAT TGATGAAAAT AGCAAATTCG GTCGAAAATT ATCCAGGTAC ATATGCAAGC ACGTTTGCAG
TTACTTTCCC GTCATTCTTC ATGTGGAAGA TATGAAGGCC TTTCATCCCA ATCGTGCTTA TGTTTTTGGC TATGAACCAC
ATTCAGTTTT TCCAATTGGA GTTGTTGCAT TAGCTGACAA CACAGGTTTT ATGCCTCTTC CCAAGATAAA AGTTCTTGCT
AGCAATGCGG TTTTTTACAC ACCTTTCTTG AGACACATAT GGACTTGGTT GGGTCTGGCT CCAGCGACAA GGAAAAGGTT
TGCCGCTCTG TTGGATGCTG GCTACAGTTG TATCTTAATA CCTGGTGGAG TTCAAGAAAC ATTTCTCATG GAGCATGGTT
CTGAGATTGT CTTTCTTAAA GCAAGGAGAG GATTTGTGCG CATAGCAATG GAGAAGGGCA AACCCCTGGT TCCAGTTTTC
TGCTTTGGGC AGTCAAATGC CTATAAGTGG TGGAAACCAG GTGGGAAGCT ATTTCTGAAT TTTTCGAGGG CTGTCAAGTT
CACCCCAATA TATTTTTGGG GAATTTTCGG ATCTCCGATA CCCTTTAAAC ATCCACTGCA TGTGGTGGTG GGTAGACCAA
TTGAACTCGA GAAAAATCCC GAGCCAACTC CTGAGGAGGT TGCCAAAATA CATAGCCAGT TTGTTGAAGC ACTTCAAGGT
CTATTTGAAC GACACAAAGC TCGAGCTGGA TATCCAGACC TTGAGTTGAG AATTGTTTGA 

>Vigan.01G310200.01
MQRATAVNDQ PRRSSGPAAA DGEKVFRGDE EFSYASSNYL KTIFALALWL GTFHLNAGLI LLTLLVLSLS QALLLIGLLL
VLMLIPIDEN SKFGRKLSRY ICKHVCSYFP VILHVEDMKA FHPNRAYVFG YEPHSVFPIG VVALADNTGF MPLPKIKVLA
SNAVFYTPFL RHIWTWLGLA PATRKRFAAL LDAGYSCILI PGGVQETFLM EHGSEIVFLK ARRGFVRIAM EKGKPLVPVF
CFGQSNAYKW WKPGGKLFLN FSRAVKFTPI YFWGIFGSPI PFKHPLHVVV GRPIELEKNP EPTPEEVAKI HSQFVEALQG
LFERHKARAG YPDLELRIV*