GBrowse Details

Vigan.01G324600.01

Basic Information:
Name: Vigan.01G324600.01
Multiple alignment
Variant Information
Position: Chr01:45309040..45312843 (- strand)
Length: 3804
Functional Information:
Description: Similar to Uncharacterized protein. [Q53B69, Glycine max]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: oxidoreductase activity (GO:0016491)
Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706)
InterPro: Oxoglutarate/iron-dependent dioxygenase (IPR005123)
Non-haem dioxygenase N-terminal domain (IPR026992)
Isopenicillin N synthase-like (IPR027443)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.04,39.10,57.91,67.13,0.04,62.11,1.65,19.28
Arabidopsis thaliana homolog: AT3G51240.1
Automatic updates:
Name: PZ316272 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max cultivar JS335 Flavonone 3 hydroxylase 1 (F3H1) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: PZ316273 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max cultivar DS9712 Flavonone 3 hydroxylase 1 (F3H1) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:45309040..45309286 (- strand)
Length: 247
Type: three_prime_UTR
Position: Chr01:45309287..45309589 (- strand)
Length: 303
Type: CDS
Position: Chr01:45309683..45310111 (- strand)
Length: 429
Type: CDS
Position: Chr01:45312205..45312570 (- strand)
Length: 366
Type: CDS
Position: Chr01:45312571..45312843 (- strand)
Length: 273
Type: five_prime_UTR


>Vigan.01G324600.01
GTTCGAGACA TAAAAGAAGA AGCAGAGAGT TAGGTAAGGA ACGTGAGAGA GACTTTAATG GCAGAGGCTA ATAATAAATA
AGCATAAACC GTAGGAAAGA AAGAGTAGTA AGTAGGAACT ACCACCACAC TACGTGGACA TGCTCTTAAA CACCTCTCAA
TCTTCCATTC TCTTACCAAT CCTTCAACCC TCTGCATTCT ATTTAACCTT CTCTACACTC ACAAACTCCT CAGTCCCACA
CCGCTCGCAA CACACAAAAC TCAGTTCACC GTCATGGCCC CCACAGCCAA AACTCTAACG TACCTAGCGC AGGAGAAAAC
CCTGGAATCC AGCTTCGTCA GGGACGAGGA TGAGCGCCCC AAGGTTGCCT ACAACCAATT CAGCGACGAG ATCCCCGTTA
TTTCTCTCGC CGGAATCGAC GACGTCCATG GCCGCAGACA AAACATTTGC GACAAAATTG TCCAGGCTTG CGAGAATTGG
GGTATTTTTC AGGTTGTTGA TCACGGTGTG GACCAAAAAC TCATCTCCGA AATGACTCGT CTCGCCACCC AGTTCTTCGC
TTTGCCGCCG GAGGAGAAGC TTCGCTTTGA CATGTCCGGT GGTAAAAAGG GTGGCTTCAT TGTCTCCAGC CATCTCCAAG
GGGAGTCGGT GCAGGACTGG AGAGAGATTG TGACATACTT TTCGTACCCA ATCAAAGCAA GGGACTATTC GCGGTGGCCG
GACACACCAG AAGGGTGGAA AGCAGTGACT GAGGAATACA GCGAGAAGCT GATGGGGCTG GCATGCAAAT TGTTGGAAGT
GTTGTCTGAG GCAATGGGGT TAGAGAAGGA TGCTTTGACA AATGCATGTG TTGATATGGA CCAGAAGGTT GTGGTCAATT
ACTACCCCAA ATGCCCTGAA CCTGATCTCA CACTCGGTCT CAAACGCCAC ACTGATCCTG GCACCATCAC CTTGCTGCTT
CAGGACCAGG TCGGTGGACT TCAAGCCACC AGGGACAATG GTAAAACCTG GATCACTGTT CAGCCTGTAG AGGGTGCTTT
TGTTGTCAAT CTTGGAGACC ATGGTCACTA TCTGAGCAAT GGAAGGTTCA AGAATGCTGA TCACCAAGCA GTGGTGAACT
CGAACCACAG TCGTTTGTCA ATAGCGACGT TTCAGAACCC AGCACCAAAT GCAACTGTGT ACCCTTTGAA GGTGAGAGAG
GGAGAGAAAC CTGTGATGGA GGAACCGATC ACTTTTGCTG AAATGTACAG GCGGAAAATG AGCAAGGATC TTGAGATGGC
AAGGATGAAG AAGCTGGCTA AGGAAAAGCA ACAGCAGGAC CTTGAGAGGG CAAAGCTAGA GTCCAAGCCT TTGAAGGAAA
TTCTTGCTTA GTCTTCAAAG ATACTATAAA ATAATTATCA TTTCCTACTA GTTTGGTGCT TTTAGCATTC TTTTAAGGGC
CATGGATCCT CATCTTTGTG TTTTTTTAAT CTTTTTAGTT TGAACCTGTC GAGATGTTGT TCTCTTGTCT TTGTATCCTA
GGATCCAAGG GGGTTTATGT ACACCTCATT ATATCTAAAT GGAAATAAGT GGCACTGCTT GTATCACTCA AACCACCTTT
ATTTTAGCAG AGGATTTA

>Vigan.01G324600.01
ATGGCCCCCA CAGCCAAAAC TCTAACGTAC CTAGCGCAGG AGAAAACCCT GGAATCCAGC TTCGTCAGGG ACGAGGATGA
GCGCCCCAAG GTTGCCTACA ACCAATTCAG CGACGAGATC CCCGTTATTT CTCTCGCCGG AATCGACGAC GTCCATGGCC
GCAGACAAAA CATTTGCGAC AAAATTGTCC AGGCTTGCGA GAATTGGGGT ATTTTTCAGG TTGTTGATCA CGGTGTGGAC
CAAAAACTCA TCTCCGAAAT GACTCGTCTC GCCACCCAGT TCTTCGCTTT GCCGCCGGAG GAGAAGCTTC GCTTTGACAT
GTCCGGTGGT AAAAAGGGTG GCTTCATTGT CTCCAGCCAT CTCCAAGGGG AGTCGGTGCA GGACTGGAGA GAGATTGTGA
CATACTTTTC GTACCCAATC AAAGCAAGGG ACTATTCGCG GTGGCCGGAC ACACCAGAAG GGTGGAAAGC AGTGACTGAG
GAATACAGCG AGAAGCTGAT GGGGCTGGCA TGCAAATTGT TGGAAGTGTT GTCTGAGGCA ATGGGGTTAG AGAAGGATGC
TTTGACAAAT GCATGTGTTG ATATGGACCA GAAGGTTGTG GTCAATTACT ACCCCAAATG CCCTGAACCT GATCTCACAC
TCGGTCTCAA ACGCCACACT GATCCTGGCA CCATCACCTT GCTGCTTCAG GACCAGGTCG GTGGACTTCA AGCCACCAGG
GACAATGGTA AAACCTGGAT CACTGTTCAG CCTGTAGAGG GTGCTTTTGT TGTCAATCTT GGAGACCATG GTCACTATCT
GAGCAATGGA AGGTTCAAGA ATGCTGATCA CCAAGCAGTG GTGAACTCGA ACCACAGTCG TTTGTCAATA GCGACGTTTC
AGAACCCAGC ACCAAATGCA ACTGTGTACC CTTTGAAGGT GAGAGAGGGA GAGAAACCTG TGATGGAGGA ACCGATCACT
TTTGCTGAAA TGTACAGGCG GAAAATGAGC AAGGATCTTG AGATGGCAAG GATGAAGAAG CTGGCTAAGG AAAAGCAACA
GCAGGACCTT GAGAGGGCAA AGCTAGAGTC CAAGCCTTTG AAGGAAATTC TTGCTTAG

>Vigan.01G324600.01
MAPTAKTLTY LAQEKTLESS FVRDEDERPK VAYNQFSDEI PVISLAGIDD VHGRRQNICD KIVQACENWG IFQVVDHGVD
QKLISEMTRL ATQFFALPPE EKLRFDMSGG KKGGFIVSSH LQGESVQDWR EIVTYFSYPI KARDYSRWPD TPEGWKAVTE
EYSEKLMGLA CKLLEVLSEA MGLEKDALTN ACVDMDQKVV VNYYPKCPEP DLTLGLKRHT DPGTITLLLQ DQVGGLQATR
DNGKTWITVQ PVEGAFVVNL GDHGHYLSNG RFKNADHQAV VNSNHSRLSI ATFQNPAPNA TVYPLKVREG EKPVMEEPIT
FAEMYRRKMS KDLEMARMKK LAKEKQQQDL ERAKLESKPL KEILA*