GBrowse Details

Vigan.01G357900.01

Basic Information:
Name: Vigan.01G357900.01
Multiple alignment
Variant Information
Position: Chr01:49242391..49247232 (+ strand)
Length: 4842
Functional Information:
Description: Similar to formamidase-like isoform X2. [XP_004509072.1, Cicer arietinum]
GO: Biological Process: metabolic process (GO:0008152)
Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides (GO:0016811)
InterPro: Acetamidase/Formamidase (IPR004304)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:38.79,0.04,8.51,102.02,2.58,18.19,1.28,9.11
Arabidopsis thaliana homolog: AT4G37550.1, AT4G37560.1
Structure :
Position: Chr01:49242391..49242925 (+ strand)
Length: 535
Type: five_prime_UTR
Position: Chr01:49242926..49243144 (+ strand)
Length: 219
Type: CDS
Position: Chr01:49243463..49243700 (+ strand)
Length: 238
Type: CDS
Position: Chr01:49243779..49243969 (+ strand)
Length: 191
Type: CDS
Position: Chr01:49244932..49245167 (+ strand)
Length: 236
Type: CDS
Position: Chr01:49245293..49245536 (+ strand)
Length: 244
Type: CDS
Position: Chr01:49245820..49245927 (+ strand)
Length: 108
Type: CDS
Position: Chr01:49246923..49247054 (+ strand)
Length: 132
Type: CDS
Position: Chr01:49247055..49247232 (+ strand)
Length: 178
Type: three_prime_UTR


>Vigan.01G357900.01
AACAATTTAT AATAAAAAAT ACATATAAAA TAAATAAAAT TTATTATTTA CTATAATAAT TATTTATATT TATTTTTATA
ATTATAATTT TATTTTATTT TATATCAAAG AAAAGAACAC ATGTTTTCAC TTGGTTAATC ATAAATAAGT TACCCTATTT
TTTATTATTT TAATAATACA AATCAAACAT TAATCATTCA GTTATTGTAC CGAATCAAAG ATTAATCATT CAGTTATCCT
ACACAGTTTA AATTTAATGG TATGATATTT GGTCTTGATT AAGGAGCTTT ATGTGATCTC TTAAGATATT ATAGTGAATC
ATGTAATTAA GAAAAACGGT ATGCACGAAA TGAATAGATG CCACACGCTT TCATCGATGA CTACAACATT GTTTTCTGGG
ACCAGCAAAG TGTGGTCCTT CCACCAATTG AAAACCGATC CCCTTTCGTC ACCGTAATGC TAAACTATGT GAGAACAGTA
TCTATCTAGA GTCTTCACCA AATCCAACAG TATGTGAGAA CACATCAATT TGTCCATGGC ACCACCAACT ACAAGACTGG
TTTCGTCAAT AGATTTGAAG AAGAAGCCAT GGCAGCAAAA CCCTCCTCTC CACAACCGAT GGCACCCTCA CATACTACAC
GTAGCCACTG TTAACACTGG TCATGTCTTT AGAGTAGAGA TGGTAGATTG GACAGGAGGC GCAATTAGAG ATGATGATTC
ACCACTCGAC GTAAAATCCA TAGACCTCTC AACTGTACAT TATCTTAGTG GGCCAATTAG AATTGTGGAT GATGATGGGA
TCCCAGCCAA GCCTGGAGAT CTGCTTGCTG TTGAAATATG CAACTTGGGT CCTCTACCTG GTGATGAATG GGGTTTTACT
GCAACATTTG ACAGAGAAAA TGGAGGTGGC TTCTTAACAG ACCATTTTCC TTGTGCCACA AAAGCTATCT GGTACTTTGA
GGGAATATAT GCTCATTCAC CTCAGATACC AGGAGTACGA TTTCCAGGTT TAACGCACCC CGGGATAATT GGAACTGCAC
CATCAATGGA ACTCCTCAAC ATATGGAATG AACGGGAGAG AGATATAGAA GAAAATGGTG TTAAGTCTTT CAAACTCTGT
GAGGTTTTGC ATACTCGACC TTTGGCAAAC TTGCCATCAA CAAATGGCTG TCTCCTTGGA AAGGTTGAAA AAGGCTCTAG
TGAATGGGAG AGGATTGCAA AGGAAGCTGC AAGAACAATA CCAGGACGAG AAAATGGTGG GAATTGTGAC ATAAAAAACC
TTAGTAGAGG GGCAAAGGTA TACCTCCCAG TTTTTGTGGA AGGAGCAAAT CTCAGCACCG GTGACATGCA CTTTTCACAG
GGCGATGGCG AGGTCTCCTT CTGTGGTGCA ATCGAGATGA GTGGTTTCTT AGAACTCAAG TGCGAAATTA TAAGAGGTGG
AATGAAAGAG TACCTTACAC CAATGGGACC CACTCCCCTT CATGTAAACC CAATTTTTGA GATAGGCCCT GTTGAGCCAA
GATTCTCAGA GTGGCTAGTT TTCGAGGGAA TCAGTGTTGA TGAAAGTGGG AGACAACACT ACCTAGATGC AAGTGTTGCA
TACAAGCGAG CAGTGCTCAA TGCCATCGAC TACATATCCA AGTTTGGATA CTCCAAAGAA CAGGTGTACC TGTTGCTGTC
TTGCATTCCT TGTGAAGGAA GAATATCTGG AATAGTCGAT GCCCCCAATG CTGTGGCAAC CCTGGCCATT CCAACAGCTA
TATTTGACCA GGATATTCGT CCTAAAAATA ACAAGGTACC AGTTGGGCCC CGACTTATGA GAAAACCAGA TGTTTTCAAA
TGCACTTACG ATGGAAATTT GCCCATTACA AAGAATCCTA TGCCACATCA TGATTCATAT TAACTACACG GGAAAAATAA
ATTTAATATC AACATTTATA TGTATGTTGT TGTTCCTCGA CCGTTGAGAA AAATTAGTGA CCTATATTAT AATAAATCTT
TACAATTTCG TGATTTCTTT TTTTGTATTG TTCTTGTACA TGATTCTATT ATCCAACTTC TCTCTTTTAT TTAACTAACA
T

>Vigan.01G357900.01
ATGGCACCAC CAACTACAAG ACTGGTTTCG TCAATAGATT TGAAGAAGAA GCCATGGCAG CAAAACCCTC CTCTCCACAA
CCGATGGCAC CCTCACATAC TACACGTAGC CACTGTTAAC ACTGGTCATG TCTTTAGAGT AGAGATGGTA GATTGGACAG
GAGGCGCAAT TAGAGATGAT GATTCACCAC TCGACGTAAA ATCCATAGAC CTCTCAACTG TACATTATCT TAGTGGGCCA
ATTAGAATTG TGGATGATGA TGGGATCCCA GCCAAGCCTG GAGATCTGCT TGCTGTTGAA ATATGCAACT TGGGTCCTCT
ACCTGGTGAT GAATGGGGTT TTACTGCAAC ATTTGACAGA GAAAATGGAG GTGGCTTCTT AACAGACCAT TTTCCTTGTG
CCACAAAAGC TATCTGGTAC TTTGAGGGAA TATATGCTCA TTCACCTCAG ATACCAGGAG TACGATTTCC AGGTTTAACG
CACCCCGGGA TAATTGGAAC TGCACCATCA ATGGAACTCC TCAACATATG GAATGAACGG GAGAGAGATA TAGAAGAAAA
TGGTGTTAAG TCTTTCAAAC TCTGTGAGGT TTTGCATACT CGACCTTTGG CAAACTTGCC ATCAACAAAT GGCTGTCTCC
TTGGAAAGGT TGAAAAAGGC TCTAGTGAAT GGGAGAGGAT TGCAAAGGAA GCTGCAAGAA CAATACCAGG ACGAGAAAAT
GGTGGGAATT GTGACATAAA AAACCTTAGT AGAGGGGCAA AGGTATACCT CCCAGTTTTT GTGGAAGGAG CAAATCTCAG
CACCGGTGAC ATGCACTTTT CACAGGGCGA TGGCGAGGTC TCCTTCTGTG GTGCAATCGA GATGAGTGGT TTCTTAGAAC
TCAAGTGCGA AATTATAAGA GGTGGAATGA AAGAGTACCT TACACCAATG GGACCCACTC CCCTTCATGT AAACCCAATT
TTTGAGATAG GCCCTGTTGA GCCAAGATTC TCAGAGTGGC TAGTTTTCGA GGGAATCAGT GTTGATGAAA GTGGGAGACA
ACACTACCTA GATGCAAGTG TTGCATACAA GCGAGCAGTG CTCAATGCCA TCGACTACAT ATCCAAGTTT GGATACTCCA
AAGAACAGGT GTACCTGTTG CTGTCTTGCA TTCCTTGTGA AGGAAGAATA TCTGGAATAG TCGATGCCCC CAATGCTGTG
GCAACCCTGG CCATTCCAAC AGCTATATTT GACCAGGATA TTCGTCCTAA AAATAACAAG GTACCAGTTG GGCCCCGACT
TATGAGAAAA CCAGATGTTT TCAAATGCAC TTACGATGGA AATTTGCCCA TTACAAAGAA TCCTATGCCA CATCATGATT
CATATTAA

>Vigan.01G357900.01
MAPPTTRLVS SIDLKKKPWQ QNPPLHNRWH PHILHVATVN TGHVFRVEMV DWTGGAIRDD DSPLDVKSID LSTVHYLSGP
IRIVDDDGIP AKPGDLLAVE ICNLGPLPGD EWGFTATFDR ENGGGFLTDH FPCATKAIWY FEGIYAHSPQ IPGVRFPGLT
HPGIIGTAPS MELLNIWNER ERDIEENGVK SFKLCEVLHT RPLANLPSTN GCLLGKVEKG SSEWERIAKE AARTIPGREN
GGNCDIKNLS RGAKVYLPVF VEGANLSTGD MHFSQGDGEV SFCGAIEMSG FLELKCEIIR GGMKEYLTPM GPTPLHVNPI
FEIGPVEPRF SEWLVFEGIS VDESGRQHYL DASVAYKRAV LNAIDYISKF GYSKEQVYLL LSCIPCEGRI SGIVDAPNAV
ATLAIPTAIF DQDIRPKNNK VPVGPRLMRK PDVFKCTYDG NLPITKNPMP HHDSY*