GBrowse Details

Vigan.01G358900.01

Basic Information:
Name: Vigan.01G358900.01
Multiple alignment
Variant Information
Position: Chr01:49370447..49376099 (+ strand)
Length: 5653
Functional Information:
Description: Similar to Adenylyl-sulfate kinase. [V7CFZ8, Phaseolus vulgaris]
GO: Biological Process: sulfate assimilation (GO:0000103)
Molecular Function: adenylylsulfate kinase activity (GO:0004020)
Molecular Function: ATP binding (GO:0005524)
InterPro: Adenylylsulphate kinase (IPR002891)
P-loop containing nucleoside triphosphate hydrolase (IPR027417)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:4.16,6.10,8.29,6.12,13.16,11.97,6.01,7.62
Arabidopsis thaliana homolog: AT2G14750.1
Automatic updates:
Name: NM_001354632 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max adenyl sulfate kinase 1-like protein (LOC100500116), transcript variant 1, mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:49370447..49370653 (+ strand)
Length: 207
Type: five_prime_UTR
Position: Chr01:49370654..49370933 (+ strand)
Length: 280
Type: CDS
Position: Chr01:49371753..49371893 (+ strand)
Length: 141
Type: CDS
Position: Chr01:49373031..49373180 (+ strand)
Length: 150
Type: CDS
Position: Chr01:49373257..49373375 (+ strand)
Length: 119
Type: CDS
Position: Chr01:49373508..49373592 (+ strand)
Length: 85
Type: CDS
Position: Chr01:49373758..49373804 (+ strand)
Length: 47
Type: CDS
Position: Chr01:49374330..49374428 (+ strand)
Length: 99
Type: CDS
Position: Chr01:49374429..49376099 (+ strand)
Length: 1671
Type: three_prime_UTR


>Vigan.01G358900.01
GTGGGATATA GACATTATAT GATTATGTTT GGGAATATTT GTCATTTGTC CGCCACTGCT TTCATTTTGC TATCACTACA
GTTAAATGCC AAATCAAATC TTCACTGAGC TTCGTATGTA AATTACAAAC ATTAGCCATA ACGGAAAACG GTTACGGAGA
ATCAGTTTTA TTATTTTCGC CGCCTCATTC TTCTCTCTCC GCCGCAGATG ATCACCGCGA AAGCACCGCC ACCGCCGTGT
ACCTCCGGCT TCTTCCGAAA AATCGAAAGC GGGCAGTCGC CGGCGGTGGA GACGCTAGGG TTGGCCAAGC TCCGAGGAAT
CAATGTCGGC GGATTGTACG GAAGTCGCAG AAGCTTCGTC GCCCACGCGA GATCGAAGCC GATTAAGGCG AAGGAGAACA
CAGGTGCTTC TTTGATCGAT GACTGGTTCA AGCCAATTCA GGCAAAGGAG GATTCGGACA CGGAGGAACG TGCTACTGCA
TTTCCTGGTA AAAATCTCCC CCAGATGTCA AATGTTGGTA ACTCAACAAA CATTTTGTGG CATGACTGTC CAATTCAGAA
ACAAGATAGA CAGCAGCTAC TTCAGCAAAA AGGCTGCGTT ATATGGCTAA CGGGCCTCAG TGGATCAGGA AAAAGCACTA
TTGCATGTGC TCTGAGCAGA AGCTTGCACT CCAGAGGGAA ACTGTCATAC ATCCTTGATG GTGACAATAT TCGGCATGGT
CTAAACCATG ATCTTAGTTT TAGAGCAGAA GATCGGTCAG AAAACATTCG AAGGATTGGT GAGGTGGCAA AACTCTTTGC
AGATGCTGGT GTTATTTGCA TCACTAGTTT AATATCACCG TACCAAAAGG ATAGAGATGC ATGTAGAGCA CTACTTCCGA
AAGGAGATTT TATTGAGGTT TTCATAGACG TTCCACTACA GGTATGTGAA GCTAGGGATC CAAAGGGGCT CTACAAGCTT
GCTCGAGCTG GAAAGATCAA AGGTTTCACT GGTATAGATG ATCCTTATGA ACCACCGTGT AGTTGTGAGA TAGTACTACA
ACAGAAAGGA AGTGGCTGTA AGTCTCCCAG TGATATGGCT GAAATTGTGA TATCCTACTT GGAGGAGAAT GGATACCTGC
GGGCATGACT TCATTTTAAA GGTTTTCTTT GTTGATTGCT TTAAAGGGGC CTTTCTTGTA ACCTATAGTT ATATTGTGTG
TAATATAATT TTTGGCGCAT AAAAACTTGT TCCTTCCTTG GTCCTAGCCA ATCTCTACAT GACAGTTTTA AATTAAAATG
ATGTCATGTG GAAATTGGTT GGGACAATGG TGTTCCCAAT AAGTTCTCCT TTCCAGCAGT AAGGAAATCA TCGTTTCCTG
CAAATCTGCT TCAGGACAAA ATAAGAAAAG GTAGAGAACC ATGGGGAAGG ACGAAGGAGT TACCGCCGCC GATTGGTATA
TCACCTAGGA ACAAAGCATT TATTGTATTT GTTTTGCATC TTTCGCCCAA TAATTGGTTG TCGTGGAATG TATAGAGAGC
GTGAAAATCT GTCATCCCAA GAATTGCGCA AGAGTAACTG GTAACACTGG GAGTGCTCGT TGCCGACATT TCTGTATCAG
GCACAGCTAG GGATATACAT TTTTAGATAC CGTGAAGTGA CCCGTTAAAA ATAATTCTTC AATTTCAATG AACGTTAGCA
GATTTTAGCA ATTTACGAAT TGTCAGTTTA GAAAGACGTG TGTTTCAATT TACAAGTAAA GGGTTATACC TGGGAAAGTT
TAAAACTATC AATTCAAGGT TTACGTAGTG TAGGGGAAGC TCACTTTTAA GAAACGTAAA TTCTTAAGAA TACCAGGTTT
AGGGTACTTA TGAATTGGTG AAGAGGGGTA CTAATGGTTC GGTGAACCTT GTTGCTTTTC GGTAATGAAG TTTGAACAAG
CAGGAAGTAA CCTTTGGCCA GAAAATGCAA AATCAGCGTT CGGAGGGAAA ATAGGCTTGG AAAAAAATAA AGGAGTGGAT
CAGGGTTTAT GGGTAATGGA TGTTTGGCCG AGAGCAAGCT GTTGAACGAT CTGAACAGGA GAAATCCACA TTATATTATA
TTACAAACAA TCTGAGCTTT GGTGAAGATT AGAATCGCAA TTAGCCAAAC TAATAGTGAT GGGTATCCGG GGCAGCTAAT
GTAGGAGTAT TCAGAATTTG ACAAAAAATG TGAATGAATA AAAAGAGAAA AATACATTTA TTGGATAGAT GAGAATGGAT
ACATCAGAAA GAGGCAAATG CAAATACCAT GTCACTTCGT CTATGCCTAT GACTAGTGCG GATAGACAAG ATGCAGAAGA
CCAATGTCAT GGTTACGGAC ACCGCAGCAG AGGCCACAGC GTCAAAAATG TAGGACCATC GGCGTTCTTG CAGTTCCCAC
AGCGTTTTGA CGAAGTCTCC AACACGGCCT ACCAGCATTG CCAGCAAATG TGGCATCTTT GAAGAACGAT ATTGCGATGG
TGAGGAGAGT TGGGTTTGGT TAGGGAACTT GGTAGCAGCA GATAAAGAGA CGACGGTTGC TTCCGCGATG TTTCCTATGT
TTTATCTTAT TCAAAGAATT TTTCTATTTG GAAAGCAGTG ACAGGACAAA GTGGGACAGC ACTCGTGCAG TTACCCCCAT
CGCGTAAGTG AAACATGCAA ACTGGAATTA ACAAGCAAAG CAAAGCAGAA GACTAAAGTT TAATCCTTGT GTCTGCTTCA
CTCTCTTCAT ATTCTTCTAA CTCTCATTTA ATCATTAATA ATTCATTTTT TAATGTAGTC ATGTTAAAAA TCAAGTTAG

>Vigan.01G358900.01
ATGATCACCG CGAAAGCACC GCCACCGCCG TGTACCTCCG GCTTCTTCCG AAAAATCGAA AGCGGGCAGT CGCCGGCGGT
GGAGACGCTA GGGTTGGCCA AGCTCCGAGG AATCAATGTC GGCGGATTGT ACGGAAGTCG CAGAAGCTTC GTCGCCCACG
CGAGATCGAA GCCGATTAAG GCGAAGGAGA ACACAGGTGC TTCTTTGATC GATGACTGGT TCAAGCCAAT TCAGGCAAAG
GAGGATTCGG ACACGGAGGA ACGTGCTACT GCATTTCCTG GTAAAAATCT CCCCCAGATG TCAAATGTTG GTAACTCAAC
AAACATTTTG TGGCATGACT GTCCAATTCA GAAACAAGAT AGACAGCAGC TACTTCAGCA AAAAGGCTGC GTTATATGGC
TAACGGGCCT CAGTGGATCA GGAAAAAGCA CTATTGCATG TGCTCTGAGC AGAAGCTTGC ACTCCAGAGG GAAACTGTCA
TACATCCTTG ATGGTGACAA TATTCGGCAT GGTCTAAACC ATGATCTTAG TTTTAGAGCA GAAGATCGGT CAGAAAACAT
TCGAAGGATT GGTGAGGTGG CAAAACTCTT TGCAGATGCT GGTGTTATTT GCATCACTAG TTTAATATCA CCGTACCAAA
AGGATAGAGA TGCATGTAGA GCACTACTTC CGAAAGGAGA TTTTATTGAG GTTTTCATAG ACGTTCCACT ACAGGTATGT
GAAGCTAGGG ATCCAAAGGG GCTCTACAAG CTTGCTCGAG CTGGAAAGAT CAAAGGTTTC ACTGGTATAG ATGATCCTTA
TGAACCACCG TGTAGTTGTG AGATAGTACT ACAACAGAAA GGAAGTGGCT GTAAGTCTCC CAGTGATATG GCTGAAATTG
TGATATCCTA CTTGGAGGAG AATGGATACC TGCGGGCATG A

>Vigan.01G358900.01
MITAKAPPPP CTSGFFRKIE SGQSPAVETL GLAKLRGINV GGLYGSRRSF VAHARSKPIK AKENTGASLI DDWFKPIQAK
EDSDTEERAT AFPGKNLPQM SNVGNSTNIL WHDCPIQKQD RQQLLQQKGC VIWLTGLSGS GKSTIACALS RSLHSRGKLS
YILDGDNIRH GLNHDLSFRA EDRSENIRRI GEVAKLFADA GVICITSLIS PYQKDRDACR ALLPKGDFIE VFIDVPLQVC
EARDPKGLYK LARAGKIKGF TGIDDPYEPP CSCEIVLQQK GSGCKSPSDM AEIVISYLEE NGYLRA*