GBrowse Details

Vigan.01G373200.01

Basic Information:
Name: Vigan.01G373200.01
Multiple alignment
Variant Information
Position: Chr01:51122098..51125400 (+ strand)
Length: 3303
Functional Information:
Description: Similar to Uncharacterized protein. [I1MV56, Glycine max]
GO: Biological Process: metabolic process (GO:0008152)
Molecular Function: catalytic activity (GO:0003824)
InterPro: Crotonase superfamily (IPR001753)
Crontonase, C-terminal (IPR014748)
Enoyl-CoA hydratase/isomerase, conserved site (IPR018376)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:8.68,3.14,15.06,11.07,16.02,32.13,9.43,10.10
Arabidopsis thaliana homolog: AT4G16800.1
Structure :
Position: Chr01:51122098..51122214 (+ strand)
Length: 117
Type: five_prime_UTR
Position: Chr01:51122215..51122395 (+ strand)
Length: 181
Type: CDS
Position: Chr01:51122482..51122651 (+ strand)
Length: 170
Type: CDS
Position: Chr01:51122911..51122985 (+ strand)
Length: 75
Type: CDS
Position: Chr01:51123411..51123501 (+ strand)
Length: 91
Type: CDS
Position: Chr01:51123616..51123667 (+ strand)
Length: 52
Type: CDS
Position: Chr01:51123919..51124022 (+ strand)
Length: 104
Type: CDS
Position: Chr01:51124429..51124505 (+ strand)
Length: 77
Type: CDS
Position: Chr01:51124811..51124987 (+ strand)
Length: 177
Type: CDS
Position: Chr01:51124988..51125400 (+ strand)
Length: 413
Type: three_prime_UTR


>Vigan.01G373200.01
GTAAAATATA AGTTTAAGCA AACACTAATT TATACTTATC CTGATATCCA GACGATCAAA CACGAAACTG GTTGATTTCC
ATATTGTCCC AAGAAGTGGA TCATCTCACT GAAGAAAATG TTGGCCATGA GAGTGTTAAC CAAGTGCAGC TCCCATGCCA
AAAGTTACAA ACCCTATCTC ACTCTCAATT TCATCGCACA TCAGCACCAC GGTCAGTACC AGACCCGTCG AAATCTTATT
CTTGACACTT CCCCTTCCGA ATTCGTCAAG CTTCACAGAC TCACCGGCCC TGATTCTGGA ATTGTCCAAA TTAGCTTGGA
TAGGCCTGAA GTAAGAAATT CTATTGGGAA AGAGATGCTG CGAGGCCTGA GTCAGGCTTT TGAGTTGATT AATCAGAAAT
CTTACGCTAA TGTTGCTATA ATCAGCAGTT CAGTTCCTGG GGTATTTTGT GCCGGGGCCG ATTTAAAGGA ACGCAGGACC
ATGAGTCAAT CAGAGGCTAA GACTTTTGTG AATTCTATTC GCTCCACATT TTCATTTCTA GAGGTGGTTT GTGTTCCAAC
TATTGCTGTT ATTGAAGGAG TAGCTCTTGG TGGTGGACTT GAGTTGGCTC TTGCATGTGA TATTCGAATA TGTGGAGAAA
ATGCTCTCAT GGGTTTGCCA GAGACAGGAC TTGCAATAAT CCCTGCGGCA GGTGGATCTC AGCGATTACC TAGATTGGTT
GGAAAAGCAA TTGCAAAGGA TATTATATTT ACTGGTCGAA AGGTTGATGG CAAAGAGGCA CTGTCCTTGG GTCTTGTTAA
TTACTGTGTT CCTGCTGGTG AAGCTTATTC AAAGGCACTT ACAGTTGCTC GGGATATCAA TCAAAAGGGT CCAGTAGCTA
TAAGGATGGC TAAAAAAGCT ATTAATGAGG GGGTTGAGAC TGATCTAACA TCAGCTTTGG TCTTGGAAGA AGATTACTAT
GATTATGTCT TGAGTACTAA AGATCGATTA GAAGGATTGG CTGCATTTGC TGAGAAGCGG AAACCAAGGT ATACCGGTGA
GTGATTGGGG TGTTCTTTTG CTGATTGTGT CTAGTGAGCA ACATCTGTCA TTTAGATTAG TCATCTAGAG CCTGTAGTCA
ACTTCCTAGA TGATGAAATT CCGCTGCAAT TTCACTGGGA ACAATCTCCT CCCATTTGTG TACAGTCATT TAGTATCTAA
AGTCACGTAC CTTAAGACAT TGGCTTTGAG CTTTTGTTCT TTATTTATAC TATTGCCACA AAGACTCAAC ATTTTCTTCT
GGAGGTTTTC TGGCAATAAA TTAATCTGTT TGGGAACTTG GAGTATAAAC TTGTGGTGAT TCAGAGTAAA AAGTAAAGAC
CATTGTATAA TTAAGCAACC CTCAAGAACA TGTATTTGTT TTCTCTCGTA AGACTTTGGT TAACGTTGAA ATTGAAGGAG
ACGAAGGAGG AAGATAA

>Vigan.01G373200.01
ATGTTGGCCA TGAGAGTGTT AACCAAGTGC AGCTCCCATG CCAAAAGTTA CAAACCCTAT CTCACTCTCA ATTTCATCGC
ACATCAGCAC CACGGTCAGT ACCAGACCCG TCGAAATCTT ATTCTTGACA CTTCCCCTTC CGAATTCGTC AAGCTTCACA
GACTCACCGG CCCTGATTCT GGAATTGTCC AAATTAGCTT GGATAGGCCT GAAGTAAGAA ATTCTATTGG GAAAGAGATG
CTGCGAGGCC TGAGTCAGGC TTTTGAGTTG ATTAATCAGA AATCTTACGC TAATGTTGCT ATAATCAGCA GTTCAGTTCC
TGGGGTATTT TGTGCCGGGG CCGATTTAAA GGAACGCAGG ACCATGAGTC AATCAGAGGC TAAGACTTTT GTGAATTCTA
TTCGCTCCAC ATTTTCATTT CTAGAGGTGG TTTGTGTTCC AACTATTGCT GTTATTGAAG GAGTAGCTCT TGGTGGTGGA
CTTGAGTTGG CTCTTGCATG TGATATTCGA ATATGTGGAG AAAATGCTCT CATGGGTTTG CCAGAGACAG GACTTGCAAT
AATCCCTGCG GCAGGTGGAT CTCAGCGATT ACCTAGATTG GTTGGAAAAG CAATTGCAAA GGATATTATA TTTACTGGTC
GAAAGGTTGA TGGCAAAGAG GCACTGTCCT TGGGTCTTGT TAATTACTGT GTTCCTGCTG GTGAAGCTTA TTCAAAGGCA
CTTACAGTTG CTCGGGATAT CAATCAAAAG GGTCCAGTAG CTATAAGGAT GGCTAAAAAA GCTATTAATG AGGGGGTTGA
GACTGATCTA ACATCAGCTT TGGTCTTGGA AGAAGATTAC TATGATTATG TCTTGAGTAC TAAAGATCGA TTAGAAGGAT
TGGCTGCATT TGCTGAGAAG CGGAAACCAA GGTATACCGG TGAGTGA

>Vigan.01G373200.01
MLAMRVLTKC SSHAKSYKPY LTLNFIAHQH HGQYQTRRNL ILDTSPSEFV KLHRLTGPDS GIVQISLDRP EVRNSIGKEM
LRGLSQAFEL INQKSYANVA IISSSVPGVF CAGADLKERR TMSQSEAKTF VNSIRSTFSF LEVVCVPTIA VIEGVALGGG
LELALACDIR ICGENALMGL PETGLAIIPA AGGSQRLPRL VGKAIAKDII FTGRKVDGKE ALSLGLVNYC VPAGEAYSKA
LTVARDINQK GPVAIRMAKK AINEGVETDL TSALVLEEDY YDYVLSTKDR LEGLAAFAEK RKPRYTGE*