GBrowse Details

Vigan.01G379200.01

Basic Information:
Name: Vigan.01G379200.01
Multiple alignment
Variant Information
Position: Chr01:51755785..51759670 (+ strand)
Length: 3886
Functional Information:
Description: Similar to Uncharacterized protein. [I1MUZ6, Glycine max]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:60.54,42.77,121.93,99.02,159.66,225.13,96.37,93.28
Arabidopsis thaliana homolog: AT5G47570.1
Automatic updates:
Name: NM_001248564 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100499749 (LOC100499749), mRNA; nuclear gene for mitochondrial product.
PubMed ID: -
Status: Known Variant
Name: NM_001349710 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max NADH-ubiquinone oxidoreductase ASHI subunit family protein (LOC100306514), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:51755785..51755804 (+ strand)
Length: 20
Type: five_prime_UTR
Position: Chr01:51755805..51756032 (+ strand)
Length: 228
Type: CDS
Position: Chr01:51756121..51756207 (+ strand)
Length: 87
Type: CDS
Position: Chr01:51756318..51756413 (+ strand)
Length: 96
Type: CDS
Position: Chr01:51759268..51759324 (+ strand)
Length: 57
Type: CDS
Position: Chr01:51759325..51759670 (+ strand)
Length: 346
Type: three_prime_UTR


>Vigan.01G379200.01
CACAAATACT CCTCAAAACG ATGTCGCATA GTGAGCGAGT GACAGTAGCA TTAGGTTGTG TGGGAGAAGG AGAAGAAAGA
AGAAAAATCA GAAGGAGAAA ATCATCAACC ATGGCAGGGA GATTGACGAA CGTAGCATCA AGGATCTTGG GCGGAAACGG
TGTCGTTTAC CGATCTGTTG CTTCCTCTCT TCGCCTCCGC TCCGGCATGG GCCTCCCAGT CGGCAAGCAC TATATTCCTG
ACAAACCTCT TCCCATGAAC GAGGAACTTC TGTGGGACAA CGGGACACCA TTTCCCGAAC CGTGCATAGA TCGTATTGCT
GACACTGTTG GAAAGTATGA AGCATTGGCC TGGCTGTGTG GGGGATTAAG CTTTTTTGCG TCTCTGGGAT TGTTGGCTGT
GTGGAATGAC AAAGCCTCCA AGATACCGTT TACACCCAAA GTATATCCGT ATGACAATCT GCGAGTGGAG CTTGGTGGTG
AACCGTAGGT AAATCGGATG GGAAGTTATT ATTTGATGTA ATTGTTCTTT TATGTTTATC TTTGTAGTTC AAAATAAGGG
ATCGTGGAGA AGACTTGCTA AATCCAACTA ATGGAAGGGC CGAATCTAGT TCTTGAGATC GTTAATGCTT AATTGCTCAT
GATTGTGAGT AGGCCAGTAT TATGCGAGCT TGTGTTTCGA TGTGTACTTA TGAAATTGAT TTTGAAGCAT AATTTTACAA
AATAATTTCA AGTGAACGTG ATTTTCGTTT GGTATCATGT ATTTGAAAAT GATTTTGGCA AAGAATGTTG TTTGGAAATT
TGATTGAGTG TGTAATTACT TAAATGAGTT TCAA

>Vigan.01G379200.01
ATGTCGCATA GTGAGCGAGT GACAGTAGCA TTAGGTTGTG TGGGAGAAGG AGAAGAAAGA AGAAAAATCA GAAGGAGAAA
ATCATCAACC ATGGCAGGGA GATTGACGAA CGTAGCATCA AGGATCTTGG GCGGAAACGG TGTCGTTTAC CGATCTGTTG
CTTCCTCTCT TCGCCTCCGC TCCGGCATGG GCCTCCCAGT CGGCAAGCAC TATATTCCTG ACAAACCTCT TCCCATGAAC
GAGGAACTTC TGTGGGACAA CGGGACACCA TTTCCCGAAC CGTGCATAGA TCGTATTGCT GACACTGTTG GAAAGTATGA
AGCATTGGCC TGGCTGTGTG GGGGATTAAG CTTTTTTGCG TCTCTGGGAT TGTTGGCTGT GTGGAATGAC AAAGCCTCCA
AGATACCGTT TACACCCAAA GTATATCCGT ATGACAATCT GCGAGTGGAG CTTGGTGGTG AACCGTAG

>Vigan.01G379200.01
MSHSERVTVA LGCVGEGEER RKIRRRKSST MAGRLTNVAS RILGGNGVVY RSVASSLRLR SGMGLPVGKH YIPDKPLPMN
EELLWDNGTP FPEPCIDRIA DTVGKYEALA WLCGGLSFFA SLGLLAVWND KASKIPFTPK VYPYDNLRVE LGGEP*