GBrowse Details

Vigan.01G391000.01

Basic Information:
Name: Vigan.01G391000.01
Multiple alignment
Variant Information
Position: Chr01:53060738..53066670 (+ strand)
Length: 5933
Functional Information:
Description: Similar to Uncharacterized protein. [I1K0B0, Glycine max]
GO: Molecular Function: acid phosphatase activity (GO:0003993)
Molecular Function: hydrolase activity (GO:0016787)
Molecular Function: metal ion binding (GO:0046872)
InterPro: Phosphoesterase domain (IPR004843)
Purple acid phosphatase-like, N-terminal (IPR008963)
Purple acid phosphatase, N-terminal (IPR015914)
Iron/zinc purple acid phosphatase-like C-terminal domain (IPR025733)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.02,0.07,2.70,6.50,4.73,0.95,7.81,1.76
Arabidopsis thaliana homolog: AT1G13750.1, AT4G24890.1, AT5G50400.1
Automatic updates:
Name: NM_001421256 NCBI(nuccore)
Organism: Medicago truncatula
Description: Medicago truncatula probable inactive purple acid phosphatase 27 (LOC11426370), mRNA.
PubMed ID: 31837401 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr01:53060738..53061020 (+ strand)
Length: 283
Type: five_prime_UTR
Position: Chr01:53061021..53061224 (+ strand)
Length: 204
Type: CDS
Position: Chr01:53061558..53061649 (+ strand)
Length: 92
Type: CDS
Position: Chr01:53061837..53061906 (+ strand)
Length: 70
Type: CDS
Position: Chr01:53062004..53062126 (+ strand)
Length: 123
Type: CDS
Position: Chr01:53062236..53062328 (+ strand)
Length: 93
Type: CDS
Position: Chr01:53062608..53062737 (+ strand)
Length: 130
Type: CDS
Position: Chr01:53063542..53063623 (+ strand)
Length: 82
Type: CDS
Position: Chr01:53063716..53063848 (+ strand)
Length: 133
Type: CDS
Position: Chr01:53064630..53064835 (+ strand)
Length: 206
Type: CDS
Position: Chr01:53064929..53065054 (+ strand)
Length: 126
Type: CDS
Position: Chr01:53065474..53065783 (+ strand)
Length: 310
Type: CDS
Position: Chr01:53065997..53066302 (+ strand)
Length: 306
Type: CDS
Position: Chr01:53066303..53066670 (+ strand)
Length: 368
Type: three_prime_UTR


>Vigan.01G391000.01
AAAAAACAAA CATGTTACTG GTGATAATTT GTTGACTGAA AACGGTGTTG GAAGAAATTA ACGTTCAATT CACATCATCT
CTTCGGGTCT TCCGTCCTCG TAGACTTTAT GCTGCAATAA TGACACCATC AAGTTCTTAC TCTTTCTACT GCCAAAGCAT
GTTAGATTTA GTAAACCAAA CACAAAAATA GAAGAAAGTC AAAGTGGAAG ATTCTGTTAT CCAAACAGAA TATAACTTAT
TTATTCGATC TCTTCCTGAA TTTGCCATAA CAGATTATAG CACATGAAGA TGAGGGCAGA AGGGTTCCTT AACATGAATA
TGGTAGCGGT GGTGGCGTGG TTGTTGAACT TCAACATCGT TTTTTGTTTT GCTCATATTC ATGGCTTCGG GGACCAACCA
CTCTCCAAGA TTGCCATTCA TAAAGCTGTT GTGTCTCTCC ATTCTGCCGC TTCCATCACT GCCACACCGT CGCTTCTCGG
TACGAAGGGT GAGGATACCC AATGGGTGAC AGTAGATATT GATTACCCAG AACCATCTGC AGATGATTGG GTTGGAGTTT
TCTCTCCTGC AAAGCTCAAT TCATCAACAT GTCCACCTGT GAGTGATCCA AAAGAAGAGA TTCCGTACAT ATGCTCAGCC
CCAATTAAGT TCAAGTTTCT GAATTACTCC AACTCACACT ATACAAAGAC AGGAAAAGGT TCTTTGAAGT TCCAGTTGAT
CAATCAACGT GCAGATTTCT CCTTTGCTCT ATTTTCAGGA GGATTATTAA ATCCTAAGCT TGTGGCAGTT TCCAATTTCA
TATCATTTGT CAATCCTAAG GTGCCTCTAT ATCCACGACT TGCTCAGGGG AAGTCTTGGG ATGAAATGAC AGTTACCTGG
ACTAGTGGAT ATCACATAAA TGAAGCTATA CCGTTTGTTG AGTGGGGTTC TGAGGGTAAA ACACAAGTGC AATCTCCTGC
CGGAACATTG ACATTTGGTC GTAACAGCAT GTGTGGTTCA CCTGCACGAA CTGTTGGCTG GCGTGACCCT GGTTTCATAC
ATACAAGTTT TCTAAAAAAC CTTTGGCCAA ACTTAGTGTA TACCTATCGA TTAGGGCATC TACTGTCTAA CGGTTCTTAT
ATTTGGAGCA AGAAATATTC ATTTAAGTCA TCACCTTATC CTGGACAGGA CTCACTGCAA CGTGTTATCA TATTTGGTGA
CATGGGAAAG GCCGAGCGTG ATGGTTCAAA TGAGTATAAT GCCTATCAAC CTGGTTCGCT TAACACCACT GACCAGCTCA
TCAAGGATTT AGAAAATATT GACATTGTTT TCCACATAGG AGATATAACT TATGCAAACG GATACATCTC GCAGTGGGAC
CAATTCACTG CTCAAGTGGA GCCAATTGCA TCAACAGTAC CTTACATGAT TGCCAGTGGT AATCACGAAC GTGATTGGCC
CAACACAGGA TCCTTTTATG ACACTACAGA TTCAGGTGGC GAATGTGGAG TTTTGGCCCA GAACATGTTT TTTGTTCCAG
CAGACAACAG AGCAAACTTT TGGTACGCGA CGGATTATGG CATGTTTCAC TTTTGCATAG CTGACAGTGA ACATGATTGG
AGAGAAGGAA CAGAACAATA CAAATTCATT GAGCATTGCC TTGCAACAGT AGACAGACAA AAACAACCCT GGTTGATTTT
TGTGGCTCAT CGTGTGCTTG GATATTCTTC TAATACTTGG TATGCCATGG AGGGCTCATT TGAAGAACCC ATGGGAAGGG
AAAGTTTGCA GAAACTCTGG CAGAAATATA AAGTAGATAT TGCATTTTAT GGTCATGTCC ATAACTACGA AAGGACATGC
CCCATATATC AGAATCAATG TGTGAATGAT GAAAGGACTC AGTATTCTGG TGTTGTGAAT GGAACGATTC ATGTTGTTGC
TGGAGGTGCA GGAAGCCACT TGTCAGATTT CAGTGAAGTA ACCCCAAAGT GGAGTCTTTA CAGAGACTAT GACTTTGGGT
TTGTAAAGTT GACAGCATTC AATCATTCAT CTCTCCTCTT TGAATACAAG AAAAGCAGTG ATGGAAAGGT CTACGATTCT
TTCACAGTTT CAAGGGATTA CAAAGATGTC TTAGCCTGTG TGCATGATGG CTGCGAAGCA ACCACTTCAG TAACTTGAAC
TGCTTTACAC ACATGCAAGT TCTAATGCTT TTTCTTTCAG TAAAAATTAA GTCATAACAT TTTCTTATGT TTTTGCTTTC
AACTTTATGA ACTGTCAAGG GGAAACTCCT CTATAAATAT ATGAAATGAA GTACAGTGGA AGTACAAGCA ATCTTGGTGA
GAAGAACATC GAAATTCTGA GTGAAAAATA GTGTTGAAGA AAGTTTCTAA AAAGTAAAAG AGAATTAGTG TTTTTGTATT
TATATTTTTA TTATTGTTAG AAGTTTTAAG AGGTCTATAG ATCTTTGTTT TTAGGTTTAA TCATCTCGGA GATCCATATT
TTTGTAGGAT TTTCTCAAAT AGATCCTCGG ATTGTAAATG TTCTCG

>Vigan.01G391000.01
ATGAAGATGA GGGCAGAAGG GTTCCTTAAC ATGAATATGG TAGCGGTGGT GGCGTGGTTG TTGAACTTCA ACATCGTTTT
TTGTTTTGCT CATATTCATG GCTTCGGGGA CCAACCACTC TCCAAGATTG CCATTCATAA AGCTGTTGTG TCTCTCCATT
CTGCCGCTTC CATCACTGCC ACACCGTCGC TTCTCGGTAC GAAGGGTGAG GATACCCAAT GGGTGACAGT AGATATTGAT
TACCCAGAAC CATCTGCAGA TGATTGGGTT GGAGTTTTCT CTCCTGCAAA GCTCAATTCA TCAACATGTC CACCTGTGAG
TGATCCAAAA GAAGAGATTC CGTACATATG CTCAGCCCCA ATTAAGTTCA AGTTTCTGAA TTACTCCAAC TCACACTATA
CAAAGACAGG AAAAGGTTCT TTGAAGTTCC AGTTGATCAA TCAACGTGCA GATTTCTCCT TTGCTCTATT TTCAGGAGGA
TTATTAAATC CTAAGCTTGT GGCAGTTTCC AATTTCATAT CATTTGTCAA TCCTAAGGTG CCTCTATATC CACGACTTGC
TCAGGGGAAG TCTTGGGATG AAATGACAGT TACCTGGACT AGTGGATATC ACATAAATGA AGCTATACCG TTTGTTGAGT
GGGGTTCTGA GGGTAAAACA CAAGTGCAAT CTCCTGCCGG AACATTGACA TTTGGTCGTA ACAGCATGTG TGGTTCACCT
GCACGAACTG TTGGCTGGCG TGACCCTGGT TTCATACATA CAAGTTTTCT AAAAAACCTT TGGCCAAACT TAGTGTATAC
CTATCGATTA GGGCATCTAC TGTCTAACGG TTCTTATATT TGGAGCAAGA AATATTCATT TAAGTCATCA CCTTATCCTG
GACAGGACTC ACTGCAACGT GTTATCATAT TTGGTGACAT GGGAAAGGCC GAGCGTGATG GTTCAAATGA GTATAATGCC
TATCAACCTG GTTCGCTTAA CACCACTGAC CAGCTCATCA AGGATTTAGA AAATATTGAC ATTGTTTTCC ACATAGGAGA
TATAACTTAT GCAAACGGAT ACATCTCGCA GTGGGACCAA TTCACTGCTC AAGTGGAGCC AATTGCATCA ACAGTACCTT
ACATGATTGC CAGTGGTAAT CACGAACGTG ATTGGCCCAA CACAGGATCC TTTTATGACA CTACAGATTC AGGTGGCGAA
TGTGGAGTTT TGGCCCAGAA CATGTTTTTT GTTCCAGCAG ACAACAGAGC AAACTTTTGG TACGCGACGG ATTATGGCAT
GTTTCACTTT TGCATAGCTG ACAGTGAACA TGATTGGAGA GAAGGAACAG AACAATACAA ATTCATTGAG CATTGCCTTG
CAACAGTAGA CAGACAAAAA CAACCCTGGT TGATTTTTGT GGCTCATCGT GTGCTTGGAT ATTCTTCTAA TACTTGGTAT
GCCATGGAGG GCTCATTTGA AGAACCCATG GGAAGGGAAA GTTTGCAGAA ACTCTGGCAG AAATATAAAG TAGATATTGC
ATTTTATGGT CATGTCCATA ACTACGAAAG GACATGCCCC ATATATCAGA ATCAATGTGT GAATGATGAA AGGACTCAGT
ATTCTGGTGT TGTGAATGGA ACGATTCATG TTGTTGCTGG AGGTGCAGGA AGCCACTTGT CAGATTTCAG TGAAGTAACC
CCAAAGTGGA GTCTTTACAG AGACTATGAC TTTGGGTTTG TAAAGTTGAC AGCATTCAAT CATTCATCTC TCCTCTTTGA
ATACAAGAAA AGCAGTGATG GAAAGGTCTA CGATTCTTTC ACAGTTTCAA GGGATTACAA AGATGTCTTA GCCTGTGTGC
ATGATGGCTG CGAAGCAACC ACTTCAGTAA CTTGA

>Vigan.01G391000.01
MKMRAEGFLN MNMVAVVAWL LNFNIVFCFA HIHGFGDQPL SKIAIHKAVV SLHSAASITA TPSLLGTKGE DTQWVTVDID
YPEPSADDWV GVFSPAKLNS STCPPVSDPK EEIPYICSAP IKFKFLNYSN SHYTKTGKGS LKFQLINQRA DFSFALFSGG
LLNPKLVAVS NFISFVNPKV PLYPRLAQGK SWDEMTVTWT SGYHINEAIP FVEWGSEGKT QVQSPAGTLT FGRNSMCGSP
ARTVGWRDPG FIHTSFLKNL WPNLVYTYRL GHLLSNGSYI WSKKYSFKSS PYPGQDSLQR VIIFGDMGKA ERDGSNEYNA
YQPGSLNTTD QLIKDLENID IVFHIGDITY ANGYISQWDQ FTAQVEPIAS TVPYMIASGN HERDWPNTGS FYDTTDSGGE
CGVLAQNMFF VPADNRANFW YATDYGMFHF CIADSEHDWR EGTEQYKFIE HCLATVDRQK QPWLIFVAHR VLGYSSNTWY
AMEGSFEEPM GRESLQKLWQ KYKVDIAFYG HVHNYERTCP IYQNQCVNDE RTQYSGVVNG TIHVVAGGAG SHLSDFSEVT
PKWSLYRDYD FGFVKLTAFN HSSLLFEYKK SSDGKVYDSF TVSRDYKDVL ACVHDGCEAT TSVT*