GBrowse Details

Vigan.01G408100.01

Basic Information:
Name: Vigan.01G408100.01
Multiple alignment
Variant Information
Position: Chr01:54594015..54596623 (+ strand)
Length: 2609
Functional Information:
Description: Similar to rac-like GTP-binding protein ARAC10-like. [XP_004501950.1, Cicer arietinum]
GO: Biological Process: GTP catabolic process (GO:0006184)
Biological Process: signal transduction (GO:0007165)
Biological Process: small GTPase mediated signal transduction (GO:0007264)
Biological Process: protein transport (GO:0015031)
Cellular Component: intracellular (GO:0005622)
Cellular Component: membrane (GO:0016020)
Molecular Function: GTPase activity (GO:0003924)
Molecular Function: GTP binding (GO:0005525)
InterPro: Small GTPase superfamily (IPR001806)
Small GTPase superfamily, Rho type (IPR003578)
Small GTPase superfamily, Rab type (IPR003579)
Small GTP-binding protein domain (IPR005225)
Small GTPase superfamily, Ras type (IPR020849)
P-loop containing nucleoside triphosphate hydrolase (IPR027417)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.12,1.49,0.71,0.29,0.00,1.03,5.78
Structure :
Position: Chr01:54594015..54594287 (+ strand)
Length: 273
Type: five_prime_UTR
Position: Chr01:54594288..54594392 (+ strand)
Length: 105
Type: CDS
Position: Chr01:54594673..54594760 (+ strand)
Length: 88
Type: CDS
Position: Chr01:54595066..54595175 (+ strand)
Length: 110
Type: CDS
Position: Chr01:54595434..54595497 (+ strand)
Length: 64
Type: CDS
Position: Chr01:54595697..54595761 (+ strand)
Length: 65
Type: CDS
Position: Chr01:54595841..54595906 (+ strand)
Length: 66
Type: CDS
Position: Chr01:54596361..54596534 (+ strand)
Length: 174
Type: CDS
Position: Chr01:54596535..54596623 (+ strand)
Length: 89
Type: three_prime_UTR


>Vigan.01G408100.01
TTATGATACA TTATGTCATC TTCATGGTTT AACTGTCGAA TTTAATTTCC CCAAAGCCGA AAAATAAGGC AACCGAACAT
CAAAGATTGT ACAAGCTGTT TCAGAAAAGA AAGGGACAGC AGAATCATGT GAAGTGCCGC CACATACACA CACATTCACT
CACTCTCCTT CTCTCTCTCC CAACCAATCA CTTAAATTCA ACCAAAACAC ACCTTTTCTG AGAACTTGTT GCTGTTGTTC
TGTTGTTGGG GTGTTGGCAC CAATTCGAGT TCAATGGCAG CAACAGCTTC GAGGTTCATC AAGTGTGTCA CAGTTGGGGA
TGGAGCTGTA GGCAAAACTA GCATGCTCAT TTGCTATACA AGCAACAAAT TCCCCACGGA CTATGTTCCA ACAGTGTTTG
ATAATTTCAG TGCAAATGTG GTTGTTGAAG GCACAACTGT CAATTTAGGC CTCTGGGATA CTGCAGGTCA AGAGGATTAC
AACAGGCTGA GGCCTTTGAG CTACAGGGGG GCAGATGTCT TTGTCCTGGC TTTCTCTTTA GTTAGTCATG CAAGCTACGA
AAATGTGTTG AAGAAGTGGG TTCCTGAACT GCAGCATTTT GCTCCTGGCA TCCCAGTGGT GCTAGTTGGC ACCAAATTGG
ATCTCCGAGA AGATAAGCAC TATTTGGCTG AGCATCCTGG CCTGGTGGCT GTGACTTCTG AGCAAGGTGA GGAATTGCGT
AAACTAGTAG GAGCTACATA TTATATTGAG TGCAGCTCAA AAACTCAGCA GAACGTGAAG TCAGTTTTTG ATGCAGCTAT
CAAGGTGGTC ATCAAGCCTC CACAAAAACA AGAGAAGAAG AAAAAACCAC GTCGAGGGTG TCTTCTGTTA GTAGACTTTT
TTCATATCAT AATAACTCCT GCACGTCAAA CTTTCTTTCT TGTGAAAAGG GATATAGATC ATTAATGTTT AGCACTGTTC
ACTGTCAAAA TTTTCAATAC ATGTGATGTA ACTTCACAAG GTATTCAACT GAACGTTCTA ATAAAAAAAC ATTA

>Vigan.01G408100.01
ATGGCAGCAA CAGCTTCGAG GTTCATCAAG TGTGTCACAG TTGGGGATGG AGCTGTAGGC AAAACTAGCA TGCTCATTTG
CTATACAAGC AACAAATTCC CCACGGACTA TGTTCCAACA GTGTTTGATA ATTTCAGTGC AAATGTGGTT GTTGAAGGCA
CAACTGTCAA TTTAGGCCTC TGGGATACTG CAGGTCAAGA GGATTACAAC AGGCTGAGGC CTTTGAGCTA CAGGGGGGCA
GATGTCTTTG TCCTGGCTTT CTCTTTAGTT AGTCATGCAA GCTACGAAAA TGTGTTGAAG AAGTGGGTTC CTGAACTGCA
GCATTTTGCT CCTGGCATCC CAGTGGTGCT AGTTGGCACC AAATTGGATC TCCGAGAAGA TAAGCACTAT TTGGCTGAGC
ATCCTGGCCT GGTGGCTGTG ACTTCTGAGC AAGGTGAGGA ATTGCGTAAA CTAGTAGGAG CTACATATTA TATTGAGTGC
AGCTCAAAAA CTCAGCAGAA CGTGAAGTCA GTTTTTGATG CAGCTATCAA GGTGGTCATC AAGCCTCCAC AAAAACAAGA
GAAGAAGAAA AAACCACGTC GAGGGTGTCT TCTGTTAGTA GACTTTTTTC ATATCATAAT AACTCCTGCA CGTCAAACTT
TCTTTCTTGT GAAAAGGGAT ATAGATCATT AA

>Vigan.01G408100.01
MAATASRFIK CVTVGDGAVG KTSMLICYTS NKFPTDYVPT VFDNFSANVV VEGTTVNLGL WDTAGQEDYN RLRPLSYRGA
DVFVLAFSLV SHASYENVLK KWVPELQHFA PGIPVVLVGT KLDLREDKHY LAEHPGLVAV TSEQGEELRK LVGATYYIEC
SSKTQQNVKS VFDAAIKVVI KPPQKQEKKK KPRRGCLLLV DFFHIIITPA RQTFFLVKRD IDH*