GBrowse Details

Vigan.01G425800.01

Basic Information:
Name: Vigan.01G425800.01
Multiple alignment
Variant Information
Position: Chr01:55957219..55962019 (- strand)
Length: 4801
Functional Information:
Description: Similar to Pyrophosphate-energized vacuolar membrane proton pump. [P21616, Vigna radiata var. radiata]
GO: Biological Process: proton transport (GO:0015992)
Cellular Component: membrane (GO:0016020)
Molecular Function: inorganic diphosphatase activity (GO:0004427)
Molecular Function: hydrogen-translocating pyrophosphatase activity (GO:0009678)
InterPro: Pyrophosphate-energised proton pump (IPR004131)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:82.44,52.43,313.43,164.63,60.89,380.38,138.45,174.48
Arabidopsis thaliana homolog: AT1G15690.1
Automatic updates:
Name: NM_001317306 NCBI(nuccore)
Organism: Vigna radiata
Description: Vigna radiata pyrophosphate-energized vacuolar membrane proton pump (LOC106768298), mRNA.
PubMed ID: 30878480 NCBI(pubmed)
9489011 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr01:55957219..55957617 (- strand)
Length: 399
Type: three_prime_UTR
Position: Chr01:55957618..55957824 (- strand)
Length: 207
Type: CDS
Position: Chr01:55958082..55958141 (- strand)
Length: 60
Type: CDS
Position: Chr01:55958254..55958664 (- strand)
Length: 411
Type: CDS
Position: Chr01:55958769..55959099 (- strand)
Length: 331
Type: CDS
Position: Chr01:55959192..55959278 (- strand)
Length: 87
Type: CDS
Position: Chr01:55959405..55959784 (- strand)
Length: 380
Type: CDS
Position: Chr01:55959875..55960449 (- strand)
Length: 575
Type: CDS
Position: Chr01:55961542..55961791 (- strand)
Length: 250
Type: CDS
Position: Chr01:55961792..55962019 (- strand)
Length: 228
Type: five_prime_UTR


>Vigan.01G425800.01
TATTGGTAAA ATTTTCATAT TGTGAGCCAC ACAGCTTCTT CTGTGTCGCC AGTCACCATA CCATACCATA CCATTCCGAC
CCCTATCCTT TCTCTCTCTC TCTCTCTCTA TTTCTCTCTC TGTCACATAT AAAACCCTCT CCACCCCTTC CCATTTCCCT
CATTCACTCG TATCTTCATT CCTTCCCATT TTTATTTTCT CCCTAAGCAC TCTCTCAATC TTCCAGCCAT GGGAGCAGCG
ATTCTCCCAG ATCTCGGAAC TGAGATTCTC ATTCCCGTCT GCGCGGTCAT TGGAATCGCC TTCGCCCTCT TCCAGTGGCT
CCTCGTCTCC AAGGTCAAAC TCTCTGCCGT CAGAGACGCT TCTCCCAACG CCGCCGCCAA GAATGGCTAC AACGACTACC
TCATCGAAGA AGAGGAGGGC ATCAACGACC ATAACGTCGT TGTCAAATGC GCCGAAATAC AGAACGCCAT TTCCGAAGGA
GCAACCTCTT TCCTTTTTAC TGAATACAAG TATGTAGGAA TCTTCATGGT GGCTTTTGCC ATTTTGATAT TCCTCTTCCT
TGGTTCAGTG GAGGGATTCA GCACAAGCCC CCAGGCTTGC ACATACGATA AAACTAAAAC GTGTAAGCCA GCACTGGCAA
CGGCTATTTT CAGCACCATA TCTTTCCTGC TTGGTGGCGT CACATCACTT GTTTCTGGAT TCCTTGGAAT GAAAATTGCA
ACTTACGCCA ATGCAAGAAC CACCTTGGAG GCAAGAAAGG GTGTTGGGAA GGCCTTCATT ACGGCTTTTA GATCTGGTGC
TGTTATGGGT TTTCTCCTAG CCGCAAATGG TCTTCTAGTT CTTTACATTG CCATCAACTT GTTTAAGATC TATTATGGTG
ATGACTGGGG TGGTCTTTTT GAGGCCATAA CTGGTTATGG TCTCGGTGGG TCTTCTATGG CTTTGTTTGG AAGAGTTGGT
GGAGGTATTT ATACCAAGGC TGCTGATGTT GGTGCTGATC TCGTTGGCAA GGTTGAGAGA AACATTCCCG AAGATGATCC
AAGAAATCCC GCTGTGATTG CTGACAATGT TGGTGACAAT GTCGGAGATA TAGCTGGTAT GGGATCTGAT CTGTTTGGTT
CATATGCGGA GTCATCTTGT GCTGCACTTG TTGTTGCTTC CATCTCCTCA TTTGGGTTGA ATCATGAGTT GACTGCAATG
CTCTACCCTC TCATTGTCAG TTCTGTGGGT ATCCTTGTTT GTTTGCTCAC CACCTTATTT GCAACTGACT TCTTTGAGAT
CAAGGCTGTG AAGGAGATTG AGCCTGCATT GAAAAAACAG CTTGTTATTT CCACTGTGCT GATGACTATT GGGGTTGCAG
TTGTTAGTTT TGTTGCACTT CCAACTTCCT TCACTATCTT CAATTTTGGA GTGCAGAAAG ACGTCAAGAG CTGGCAGCTA
TTTTTGTGTG TTGCTGTTGG TCTTTGGGCA GGACTTATTA TCGGATTTGT AACTGAGTAC TATACTAGTA ACGCATATAG
TCCTGTTCAA GACGTTGCTG ACTCCTGCAG AACTGGTGCT GCAACTAATG TTATATTTGG CCTTGCCTTA GGATACAAGT
CTGTTATCAT TCCAATTTTT GCTATAGCAA TTAGTATTTT TGTTAGTTTC ACCTTTGCTG CCATGTATGG TATTGCCGTT
GCTGCACTTG GGATGCTGAG TACCATTGCA ACTGGGTTGG CCATAGACGC ATATGGTCCA ATCAGTGACA ATGCTGGAGG
TATTGCTGAG ATGGCTGGCA TGAGTCACAG AATTCGTGAG AGAACTGATG CTCTTGATGC TGCTGGTAAC ACTACAGCTG
CAATTGGGAA GGGCTTTGCC ATTGGTTCTG CCGCCCTTGT ATCTCTGGCC CTTTTTGGTG CCTTTGTGAG CCGAGCATCT
ATTACGACTG TTGATGTGTT GACTCCAAAG GTTTTCATTG GTTTAATTGT GGGGGCAATG CTTCCTTACT GGTTTTCTGC
CATGACCATG AAGAGTGTGG GAAGTGCTGC TCTGAAGATG GTTGAGGAAG TGCGCAGGCA ATTCAATACC ATCCCAGGGT
TGATGGAGGG AACTGCCAAG CCTGACTATG CTACGTGTGT TAAGATCTCT ACTGATGCTT CCATTAAAGA AATGATTCCA
CCTGGTGCTC TTGTCATGCT TACACCTCTT GTTGTTGGGA TCCTTTTTGG TGTCGAAACA CTTTCTGGTG TCCTCGCTGG
ATCTTTGGTA TCTGGTGTAC AGATTGCCAT CTCTGCATCC AACACCGGCG GTGCATGGGA TAATGCAAAG AAGTACATTG
AGGCTGGTGC TTCTGAGCAT GCCAGAACCC TTGGTCCAAA AGGGTCAGAT TGCCACAAGG CAGCAGTTAT TGGTGACACC
ATTGGAGACC CTCTCAAGGA TACATCTGGT CCCTCACTTA ACATCCTTAT CAAGCTGATG GCAGTTGAGT CTCTTGTTTT
TGCCCCTTTC TTTGCTACCC ATGGTGGTTT ACTCTTCAAG ATCTTCTAAA GAGTAGAGAG AAAAGAGCAT CGTTCATCAA
TTTTCTACTA TGATGGCAGA ACAAGGAAAA TCCGTCCTTT TACCACCATG CCTTTACTTT TTTGTTAGTC TTTTTTTAAC
TCATCTGTCA TGTCGACTTC ATTGTTTTTG AAACAGTATA TTTTGTCACT CATTTGTAGT TTTAAGAAAC TTCATTAGGG
AGTCTGCAGC AAAATTTTTC CTTGTTACGT GGAGTTTCAT GATGATGACG ATGATTATAC TATTTTCCGC GCGAACCATT
TCTCAGATGT CGTTGGTCGA TTCTGGTAGA TACTTCATTT TTTGTGTTCT GGTTTTAAGA GATTTCTTGA AATTGAACTA
ATTCAATTAA AACGGAATAA TGGATTAATA AAAAAACGTG AATTAAAT

>Vigan.01G425800.01
ATGGGAGCAG CGATTCTCCC AGATCTCGGA ACTGAGATTC TCATTCCCGT CTGCGCGGTC ATTGGAATCG CCTTCGCCCT
CTTCCAGTGG CTCCTCGTCT CCAAGGTCAA ACTCTCTGCC GTCAGAGACG CTTCTCCCAA CGCCGCCGCC AAGAATGGCT
ACAACGACTA CCTCATCGAA GAAGAGGAGG GCATCAACGA CCATAACGTC GTTGTCAAAT GCGCCGAAAT ACAGAACGCC
ATTTCCGAAG GAGCAACCTC TTTCCTTTTT ACTGAATACA AGTATGTAGG AATCTTCATG GTGGCTTTTG CCATTTTGAT
ATTCCTCTTC CTTGGTTCAG TGGAGGGATT CAGCACAAGC CCCCAGGCTT GCACATACGA TAAAACTAAA ACGTGTAAGC
CAGCACTGGC AACGGCTATT TTCAGCACCA TATCTTTCCT GCTTGGTGGC GTCACATCAC TTGTTTCTGG ATTCCTTGGA
ATGAAAATTG CAACTTACGC CAATGCAAGA ACCACCTTGG AGGCAAGAAA GGGTGTTGGG AAGGCCTTCA TTACGGCTTT
TAGATCTGGT GCTGTTATGG GTTTTCTCCT AGCCGCAAAT GGTCTTCTAG TTCTTTACAT TGCCATCAAC TTGTTTAAGA
TCTATTATGG TGATGACTGG GGTGGTCTTT TTGAGGCCAT AACTGGTTAT GGTCTCGGTG GGTCTTCTAT GGCTTTGTTT
GGAAGAGTTG GTGGAGGTAT TTATACCAAG GCTGCTGATG TTGGTGCTGA TCTCGTTGGC AAGGTTGAGA GAAACATTCC
CGAAGATGAT CCAAGAAATC CCGCTGTGAT TGCTGACAAT GTTGGTGACA ATGTCGGAGA TATAGCTGGT ATGGGATCTG
ATCTGTTTGG TTCATATGCG GAGTCATCTT GTGCTGCACT TGTTGTTGCT TCCATCTCCT CATTTGGGTT GAATCATGAG
TTGACTGCAA TGCTCTACCC TCTCATTGTC AGTTCTGTGG GTATCCTTGT TTGTTTGCTC ACCACCTTAT TTGCAACTGA
CTTCTTTGAG ATCAAGGCTG TGAAGGAGAT TGAGCCTGCA TTGAAAAAAC AGCTTGTTAT TTCCACTGTG CTGATGACTA
TTGGGGTTGC AGTTGTTAGT TTTGTTGCAC TTCCAACTTC CTTCACTATC TTCAATTTTG GAGTGCAGAA AGACGTCAAG
AGCTGGCAGC TATTTTTGTG TGTTGCTGTT GGTCTTTGGG CAGGACTTAT TATCGGATTT GTAACTGAGT ACTATACTAG
TAACGCATAT AGTCCTGTTC AAGACGTTGC TGACTCCTGC AGAACTGGTG CTGCAACTAA TGTTATATTT GGCCTTGCCT
TAGGATACAA GTCTGTTATC ATTCCAATTT TTGCTATAGC AATTAGTATT TTTGTTAGTT TCACCTTTGC TGCCATGTAT
GGTATTGCCG TTGCTGCACT TGGGATGCTG AGTACCATTG CAACTGGGTT GGCCATAGAC GCATATGGTC CAATCAGTGA
CAATGCTGGA GGTATTGCTG AGATGGCTGG CATGAGTCAC AGAATTCGTG AGAGAACTGA TGCTCTTGAT GCTGCTGGTA
ACACTACAGC TGCAATTGGG AAGGGCTTTG CCATTGGTTC TGCCGCCCTT GTATCTCTGG CCCTTTTTGG TGCCTTTGTG
AGCCGAGCAT CTATTACGAC TGTTGATGTG TTGACTCCAA AGGTTTTCAT TGGTTTAATT GTGGGGGCAA TGCTTCCTTA
CTGGTTTTCT GCCATGACCA TGAAGAGTGT GGGAAGTGCT GCTCTGAAGA TGGTTGAGGA AGTGCGCAGG CAATTCAATA
CCATCCCAGG GTTGATGGAG GGAACTGCCA AGCCTGACTA TGCTACGTGT GTTAAGATCT CTACTGATGC TTCCATTAAA
GAAATGATTC CACCTGGTGC TCTTGTCATG CTTACACCTC TTGTTGTTGG GATCCTTTTT GGTGTCGAAA CACTTTCTGG
TGTCCTCGCT GGATCTTTGG TATCTGGTGT ACAGATTGCC ATCTCTGCAT CCAACACCGG CGGTGCATGG GATAATGCAA
AGAAGTACAT TGAGGCTGGT GCTTCTGAGC ATGCCAGAAC CCTTGGTCCA AAAGGGTCAG ATTGCCACAA GGCAGCAGTT
ATTGGTGACA CCATTGGAGA CCCTCTCAAG GATACATCTG GTCCCTCACT TAACATCCTT ATCAAGCTGA TGGCAGTTGA
GTCTCTTGTT TTTGCCCCTT TCTTTGCTAC CCATGGTGGT TTACTCTTCA AGATCTTCTA A

>Vigan.01G425800.01
MGAAILPDLG TEILIPVCAV IGIAFALFQW LLVSKVKLSA VRDASPNAAA KNGYNDYLIE EEEGINDHNV VVKCAEIQNA
ISEGATSFLF TEYKYVGIFM VAFAILIFLF LGSVEGFSTS PQACTYDKTK TCKPALATAI FSTISFLLGG VTSLVSGFLG
MKIATYANAR TTLEARKGVG KAFITAFRSG AVMGFLLAAN GLLVLYIAIN LFKIYYGDDW GGLFEAITGY GLGGSSMALF
GRVGGGIYTK AADVGADLVG KVERNIPEDD PRNPAVIADN VGDNVGDIAG MGSDLFGSYA ESSCAALVVA SISSFGLNHE
LTAMLYPLIV SSVGILVCLL TTLFATDFFE IKAVKEIEPA LKKQLVISTV LMTIGVAVVS FVALPTSFTI FNFGVQKDVK
SWQLFLCVAV GLWAGLIIGF VTEYYTSNAY SPVQDVADSC RTGAATNVIF GLALGYKSVI IPIFAIAISI FVSFTFAAMY
GIAVAALGML STIATGLAID AYGPISDNAG GIAEMAGMSH RIRERTDALD AAGNTTAAIG KGFAIGSAAL VSLALFGAFV
SRASITTVDV LTPKVFIGLI VGAMLPYWFS AMTMKSVGSA ALKMVEEVRR QFNTIPGLME GTAKPDYATC VKISTDASIK
EMIPPGALVM LTPLVVGILF GVETLSGVLA GSLVSGVQIA ISASNTGGAW DNAKKYIEAG ASEHARTLGP KGSDCHKAAV
IGDTIGDPLK DTSGPSLNIL IKLMAVESLV FAPFFATHGG LLFKIF*