GBrowse Details

Vigan.01G435800.01

Basic Information:
Name: Vigan.01G435800.01
Multiple alignment
Variant Information
Position: Chr01:56930590..56933655 (+ strand)
Length: 3066
Functional Information:
Description: Similar to Lactoylglutathione lyase / glyoxalase I family protein. [XP_007023869.1, Theobroma cacao]
InterPro: Glyoxalase-like domain (IPR025870)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:167.50,101.00,3.86,0.29,0.44,1.44,6.60,0.47
Automatic updates:
Name: NM_001249520 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max putative lactoylglutathione lyase (GLYI-19), mRNA.
PubMed ID: 27083416 NCBI(pubmed)
Status: Known Variant
Name: NM_001353888 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max putative lactoylglutathione lyase (GLYI-24), mRNA.
PubMed ID: 27083416 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr01:56930590..56931048 (+ strand)
Length: 459
Type: five_prime_UTR
Position: Chr01:56931049..56931191 (+ strand)
Length: 143
Type: CDS
Position: Chr01:56931369..56931474 (+ strand)
Length: 106
Type: CDS
Position: Chr01:56931567..56931821 (+ strand)
Length: 255
Type: CDS
Position: Chr01:56931822..56933655 (+ strand)
Length: 1834
Type: three_prime_UTR


>Vigan.01G435800.01
CAGTTATCTG CGTTTGAATT GCAAGTTTCT CAATACTTAT CCGCAGTTTG AGCAATGACA TGTTTTTGTC CGCTACAAAA
AGTAATAGAC TAGGTCACTA CGACACACAC AAACTAACGT GTCGGTGAAA CAAGATAAGT GTTACTTGCT GTCTGGTCCT
GATTCATCAA CAAGAAATCT ACGTGTAACC AAATCGTTGT CTGAATCCAA TCCCAACTTC AAACACGAAA CTTCTAAAAC
ATGCAGGAAA AAATATTTGC ATATCCCTAA CAACCCACTA TAAATAGAAG CACGCATAAC ATAGGCCAAC CTCGTTTTTC
TCTATCTTAT CGACAACATT CTTCGATACG CTTGAAACTA ATTTCTGCAC CGCCATATAC CTCTCAGAAG AACCACTTTC
TCATCTTCTT TCTTCTTAAC TGTTTTGCTG ATTGATAGAA CCCAAAAGGG ACAGAAGGAA TGTCGAACCC TCTGCAACTC
AAGTCATTGA ATCATATCTC ACTTGTGTGT GCATCACTGG AGAAGTCCGT TGAGTTTTAC GTAAACGTTC TCGGGTTTTC
TCCTGTTAAA AGACCTACTT CGTTAGACTT CAATGGTGCA TGGTTATTCA ATTATGGCAT TGGGATACAC CTTCTCCAAT
CAGAAGAGCC ACGAGGCATG CCCAAAACTA CTCCCATTAA TCCTAAGGAC AACCACATTT CTTTCCAATG TGAAAGTACA
GCAGCTGTGG AGAAAAGACT GCAGCAAATG GAGATAGAGT ACGTGAAGAG CAGAGTAGAG GAAAGCGGAA TCTACGTTGA
TCAGCTATTC TTCCATGACC CAGATGGCAT GATGATCGAA ATCTGCAACT GTGATAACAT CCCTATGGTG CCTTTATCAG
AGGACAAACT ATGGTCATGC TCTCGCTTCA ATTGCAATAT TCCAAACCGA CAGCGCCAGA TTCAGCAAAT GATCCCTATG
TAGTACTAAG TTTCAAACAC TTGCAATGTC ATGTCTGCCT GTACAAAATT ATCGCTTGTA AATTATGTTG TATGTTAGTA
ATTGTAATAA AATTTTCTTC ATGATAGTAA AAATCTTTCT TCAACGTTTT TGTCGTTTAC CGAGCTGTTA TAGTACCTGC
AACACCATCA CCTATCTTCA GTGGTCTGGA CTGCGCGTGA ACTGATAACC CATTTACTCC TAGCAGTCTA AGATCACAGT
TTCTGATAGG TTGTGAACTC CTTGATATAA TTATACGTAA AGATTTATAC TTTACAATAA TTTTTCTGCC TAATGCCCGA
GTTCCAGTCT CATGAATTGA ACGTGTAAAT TCATTCATTT TCTTCAAGGA ATTTTAAAAA AATTGCTTTC AGGATGTAAC
ATGTTCCGAC AATAATTTAG ACAGCTTAAC TAACAACTTT TTTTATGCAA CTGAGAAAAA TTATACGTTT TTACGTTAAC
TGAGTCAGAA ACTCGCAAAA ATTAAATGTA TAAGTTTATA ACCTTTTTGG AGACTACTTA CAAAAACGAG CAAGTTAGAT
ATAAACTATG ATTTCCAATA ATAATTTGCT ATAACAGATC AGGAAGAAAA AACATTAGTG TATTTATACT AAGTGTTCTT
TTTAAAATCT TTTGAAAATC GAGTTTAAGA ATGAATTTGA CCAAATTTAA AATTATAAAA GAAGAAAATA CGGAAGAGGA
GTATGAGAAA ACAGTTTTAT TTATACCAAG TGTTTATTAA ATCTATTGCA AACTAAGTTC AGGAATAAGT TTAGACCAAA
TCTCTGCAGG ATCAGATCAA ATTAAATTTG TTTTAATAAC CACTAAAAAG TTTTAAGAAG ATTTTTCAGT TTAATAAAAT
TTGAAATCTG CAACATTTAC CCTTCAAATC TAGTTGTCCA AAGCGAGGTT GATTAAACCT TAATTAGTGT CTCAACCCGA
TGATTGCAGA GAGAAATAAA CTATAATTTT GGGAAATTAT AATAGAGAAG GTTACTGCAC ACGATGTGTA TATTTTTAAG
GAATTAAGGT GTATGAAGAA ATGAGTTTAA ATAACAACTG GTGTAGTTCT TGAACAACAA GGATTTCGTG GCAAACACCC
TACACATCCA GTAAGACCAA AATAAAATAG ACAGAGAAAT ATATCTGTCT TTTTATATTT TTTTTTCTCA ATAATTGAAT
GAATTTGGAT ACACAAAAAG TAGAATTTCT CAAATTAAAA GTTCTCGAAG ATGTAAAGAA GAATGCTTAG CAACTGGGAA
GCTCTCTGTA TTTGAAAATA AAACAATTGG GGTAGCATAC CATGGAGAAA CAGTTCAATA CCGATCCTTT AATAGCTTTG
GTTATGCCAC TCATGTTGAA GCATATTCAA CAAATAGTGA AGATGTTAAA AGAAAAATAA GTTTGACAGA AGCGTAGGAA
TATAAAAGGC AAAAGAAAAG ATAAATTTGA TTCAGAAATT TTCTGAAATT AAATATTGGA TCGGTAAAAG ATCCCTTTGT
GATGGAATCT GCAAGATGAA AAAGGATACT GAGGAAATAT TTAGTTTTTA CCTTTGCAAA GGAATTGAAA GCTGAAAAAG
GGTGAAAATA GTTGAATGAA GGAAAGGTTT GAGGTTGATA GAGGAAAGTG AAGAAGAAGG AGCTCCCTTC AGTCCAAAAC
AGCATGAAGT TGATGCAGAG GGTGTTTTGG GCTGCAAGAG AACTCCTATT TCTGCATCTT TCACAGATGA ACAAACAGGA
ATGAATGAGA GTGTAGGTAA GAAGGAAAAG AAGGTCCTTT ATAAGCACTT TTCCTTCGAT TCAATTAATG GTCAAAA

>Vigan.01G435800.01
ATGTCGAACC CTCTGCAACT CAAGTCATTG AATCATATCT CACTTGTGTG TGCATCACTG GAGAAGTCCG TTGAGTTTTA
CGTAAACGTT CTCGGGTTTT CTCCTGTTAA AAGACCTACT TCGTTAGACT TCAATGGTGC ATGGTTATTC AATTATGGCA
TTGGGATACA CCTTCTCCAA TCAGAAGAGC CACGAGGCAT GCCCAAAACT ACTCCCATTA ATCCTAAGGA CAACCACATT
TCTTTCCAAT GTGAAAGTAC AGCAGCTGTG GAGAAAAGAC TGCAGCAAAT GGAGATAGAG TACGTGAAGA GCAGAGTAGA
GGAAAGCGGA ATCTACGTTG ATCAGCTATT CTTCCATGAC CCAGATGGCA TGATGATCGA AATCTGCAAC TGTGATAACA
TCCCTATGGT GCCTTTATCA GAGGACAAAC TATGGTCATG CTCTCGCTTC AATTGCAATA TTCCAAACCG ACAGCGCCAG
ATTCAGCAAA TGATCCCTAT GTAG

>Vigan.01G435800.01
MSNPLQLKSL NHISLVCASL EKSVEFYVNV LGFSPVKRPT SLDFNGAWLF NYGIGIHLLQ SEEPRGMPKT TPINPKDNHI
SFQCESTAAV EKRLQQMEIE YVKSRVEESG IYVDQLFFHD PDGMMIEICN CDNIPMVPLS EDKLWSCSRF NCNIPNRQRQ
IQQMIPM*