GBrowse Details

Vigan.01G439600.01

Basic Information:
Name: Vigan.01G439600.01
Multiple alignment
Variant Information
Position: Chr01:57225551..57232047 (+ strand)
Length: 6497
Functional Information:
Description: Similar to Uncharacterized protein. [I1MUD0, Glycine max]
GO: Biological Process: ion transport (GO:0006811)
Biological Process: potassium ion transport (GO:0006813)
Biological Process: transmembrane transport (GO:0055085)
Cellular Component: membrane (GO:0016020)
Molecular Function: ion channel activity (GO:0005216)
Molecular Function: voltage-gated potassium channel activity (GO:0005249)
Molecular Function: protein binding (GO:0005515)
InterPro: Cyclic nucleotide-binding domain (IPR000595)
Ankyrin repeat (IPR002110)
Potassium channel, voltage-dependent, EAG/ELK/ERG (IPR003938)
Ion transport domain (IPR005821)
RmlC-like jelly roll fold (IPR014710)
Cyclic nucleotide-binding-like (IPR018490)
Ankyrin repeat-containing domain (IPR020683)
Potassium channel, plant-type (IPR021789)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:15.48,10.83,2.34,0.78,5.64,3.95,11.57,3.70
Arabidopsis thaliana homolog: AT2G25600.1, AT2G26650.1, AT4G18290.1, AT4G22200.1, AT4G32500.1, AT5G46240.1
Automatic updates:
Name: KM491715 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max cultivar Dongnong 50 potassium channel AKT1-like protein mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: NM_001317502 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max potassium channel AKT1-like (LOC100781642), mRNA.
PubMed ID: 33568288 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr01:57225551..57225735 (+ strand)
Length: 185
Type: five_prime_UTR
Position: Chr01:57225736..57225887 (+ strand)
Length: 152
Type: CDS
Position: Chr01:57226937..57227302 (+ strand)
Length: 366
Type: CDS
Position: Chr01:57227399..57227456 (+ strand)
Length: 58
Type: CDS
Position: Chr01:57227555..57227872 (+ strand)
Length: 318
Type: CDS
Position: Chr01:57227954..57228199 (+ strand)
Length: 246
Type: CDS
Position: Chr01:57228298..57228396 (+ strand)
Length: 99
Type: CDS
Position: Chr01:57228531..57228563 (+ strand)
Length: 33
Type: CDS
Position: Chr01:57228650..57228835 (+ strand)
Length: 186
Type: CDS
Position: Chr01:57229111..57229305 (+ strand)
Length: 195
Type: CDS
Position: Chr01:57229406..57229481 (+ strand)
Length: 76
Type: CDS
Position: Chr01:57230979..57231898 (+ strand)
Length: 920
Type: CDS
Position: Chr01:57231899..57232047 (+ strand)
Length: 149
Type: three_prime_UTR


>Vigan.01G439600.01
GTGGTTCATT GCCATTTGCC ACCATTCTCC AACCGAGAAT CGCTTCCGAA CAAAAGCACG TTCATAACCG CTTCCACAAC
AGCATGCCGA CCAATAATAC TCTCTTGCAC TAACATTTCA GTAAAAAGTC ACACACGGTC TCAACACGGT CACCACCAAA
CTCAACTAAA CAGAAATAAA CAAAAATGTT GGGCTGCGGC CAAGAAGAGA TTGAACTGTC ACGGGATGGC AGCCACTACA
GTCTCTCCAC CGGAATACTT CCGTCTCTCG GGGCCAAAAG CAACCGTAGA ATCAAGCTGC GCCGCTTTAT TCTATCGCCC
TACGGCCGCC GTTACAGGAT ATGGGAAACT TTCCTTATTA TTCTGGTATT TTATACTGCC TGGGTTTCTC CCTTCGAATT
CGGATTCTTG AAGAAGCCAG AACCACCGCT TTCCATTTCG GACAATATTG TGAATGGATT TTTTTTCGTG GATATAGTTC
TGACCTTCTT TGTGGCTTAC ATTGACAAAA CCACCTATTT GATCGTGGAT GATCGGAAAC AGATTGCTTG GAAATATGCA
AGGACTTGGC TGGCCTTCGA TGTTGTCTCC ATCATTCCTT CAGAGCTTAT ACAAAAGTTA TCACCTTCTC CTCTTCAATC
TTACGGTTTA TTCAATATGC TTCGCCTATG GCGTCTTCGG AGAGTCAGTG CTTTGTTTTC TCGGCTTGAG AAGGACAGAA
ACTATAACTA TTTTTGGGTT CGGTGTGCCA AGCTTATTTC TGTTACTCTC TTCGCTGTTC ATTGTGCTGG GTGTTTCTAT
TATCTTATTG CTGCACGTTA TCATGATCCA AAAAAGACGT GGATTGGTTC AACGATGGAT AATTTCCTTG AACATAGTTT
GTGGTCAAGA TACGTGATGT CTATTTACTG GTCTATTACT ACCTTAACAA CTGTCGGTTA TGGAGATTTG CATCCAGTGA
ATTCAAGGGA GATGACCTTT GACATTTTCT ATATGCTCTT TAATCTGGGG TTAACAGCGT ATTTGATTGG TAATATGACC
AACTTGGTTG TCCACGGCAC AAGTCGAACC AGAAAATTTA GAGATACCAT CCAAGCTGCC TCAAATTTTG CCCAAAGGAA
TCAATTGCCT CATCGGTTGC AAGACCAAAT GCTTGCCCAC TTGTGTTTGA AGTATAGAAC CGACTCGGAA GGGTTGCAGC
AGCAAGAGAC ACTTGATTCT CTTCCTAAGG CCATCAGATC CAGCATTTCA CATTATCTTT TCAATTCTCT GATTGATAAG
GTCTACTTGT TTAAGGAGGT TTCGAATGAC TTGCTCTTTC AATTGGTATC AGAGATGAAA GCTGAATATT TTCCACCCAA
AGAAGATGTT ATCTTGCAAA ACGAAGCCCC CACTGACTTT TATATACTGG TCACTGGTGC CGTGGAACTG GTAGTTCTTA
AAAATGGGGT TGAACAGGTT GTTGGAGAGG CCAAAACTGG TGATCTTTGT GGTGAGATAG GTGTGCTCTG TTATAAGCCA
CAGCTTTTCA CTGTTCGAAC GAAGCGACTA AGCCAGTTGC TGAGGCTAAA TCGTACTACT TTCCTGAATA TTGTTCAGGC
CAACGTGGGG GACGGAACCA TTATCATGAA TAATCTGCTT CAGCATTTGA AAGAGCTCAA CGACCCAATC ATGGAGGGAG
TTTTGGTGGA GATTGAGAAC ATGCTAGCTC GTGGTAGAAT GGACCTACCA GTGAGTGTGT GCTTTGCGGC AGCAAGAGGT
GATGACTTGT TGTTACATCA GTTGCTGAAA CGAGGAATGG ATCCAAACGA ATCCGACAAC AATCGAAGGA CAGCTTTGCA
TATAGCAGCA TCTCAAGGGA AAGAAAACTG TGTTCTGCTT CTGTTAGATT ATGGGGCGGA CCCCAACATT ACAGATTTGG
ACGGTAATGT GGCACTATGG GAGGCTATGG TGGGAGGACA TGAGTCAGTG AGGAAGGTGT TGGCAGAAAA TGGAGCTAAC
TTGCAATGTG GGGATGTGGG CCAGTTTGCA TGTACCGCTG TTGAGCAGAA CAGTTTGAAG TTGCTGAAGG AAATAAGGCG
CTACGGAGGA GATATCACCC TTCCAAGCAT CAACAGTGGG ACCACAGCCT TGCACGTTGC AGTGTCGGAG GGGAACGTTG
AAATTGTGAA ATACCTTTTG GATCACGGGG CAAGCATTGA CAAGCCGGAC AAGCACGGCT GGACCGCCAG AGGTCTGGCA
GATCAGCAAT CTCATACAGA AATAAAAGCC ATTTTTGACT CCACTGGGGA CCCTAAGGTT CAGTCTTTCG TTACCATACC
CGAGAAGCAG AGTGGGTTCA GGTTCCTTGG AAGGTTTACT AGTGAGCCAA CCATGCCTTC ACCCCTTGAC GGCTCATTTC
ATGGAACGGA TGCCTCTTGG AGCCAGAGCC AGAGCCAGAA CCGTCCAAGG CGTAGGAGCA GCAATTATCA TAATTCACTC
TTAGGGATGA TGGCAGCAGC ACATAATGGG GAAAAGGACC TGCTTTTGCC TCTTGACATG AATAACAAGG CAAGCAATGT
CATGAAGAGT AGTAATGCAG GTAGTCCAGC TAGAGTGATT ATTAGTTGCC CTGAAAAGGG TGAGGTTGTG GGGAAGCTTG
TTTTACTACC TGGAAGCTTT CAAGAGCTAC TTGAGATTGG AGCCAAAAAA TTTGGTGTCT ATCCTGCCAA GGTTTTATGC
AAAGATGGAG GTCAAATTGA AGATTTAGAG GTTATTAGAG ATGGTGACCA TCTGGTCTTT GTCTGTGCTG GTGGGGTTGT
AGAATCCAAG TGTCCAACTC CAGCACCACT TTAGGATGCC ATGCATATGT AGAGTATGCC TACAAGGAAC GTCTTTACTA
TCATTGTAAT TTTTTCCCGT TCTCAACTGT AAATCTTTTA GCCATATCAA TTTTACTAAT GTGAAATAAA ATATTTTCCC
CTTCGGTTTC TTTCCGCTGG AAA

>Vigan.01G439600.01
ATGTTGGGCT GCGGCCAAGA AGAGATTGAA CTGTCACGGG ATGGCAGCCA CTACAGTCTC TCCACCGGAA TACTTCCGTC
TCTCGGGGCC AAAAGCAACC GTAGAATCAA GCTGCGCCGC TTTATTCTAT CGCCCTACGG CCGCCGTTAC AGGATATGGG
AAACTTTCCT TATTATTCTG GTATTTTATA CTGCCTGGGT TTCTCCCTTC GAATTCGGAT TCTTGAAGAA GCCAGAACCA
CCGCTTTCCA TTTCGGACAA TATTGTGAAT GGATTTTTTT TCGTGGATAT AGTTCTGACC TTCTTTGTGG CTTACATTGA
CAAAACCACC TATTTGATCG TGGATGATCG GAAACAGATT GCTTGGAAAT ATGCAAGGAC TTGGCTGGCC TTCGATGTTG
TCTCCATCAT TCCTTCAGAG CTTATACAAA AGTTATCACC TTCTCCTCTT CAATCTTACG GTTTATTCAA TATGCTTCGC
CTATGGCGTC TTCGGAGAGT CAGTGCTTTG TTTTCTCGGC TTGAGAAGGA CAGAAACTAT AACTATTTTT GGGTTCGGTG
TGCCAAGCTT ATTTCTGTTA CTCTCTTCGC TGTTCATTGT GCTGGGTGTT TCTATTATCT TATTGCTGCA CGTTATCATG
ATCCAAAAAA GACGTGGATT GGTTCAACGA TGGATAATTT CCTTGAACAT AGTTTGTGGT CAAGATACGT GATGTCTATT
TACTGGTCTA TTACTACCTT AACAACTGTC GGTTATGGAG ATTTGCATCC AGTGAATTCA AGGGAGATGA CCTTTGACAT
TTTCTATATG CTCTTTAATC TGGGGTTAAC AGCGTATTTG ATTGGTAATA TGACCAACTT GGTTGTCCAC GGCACAAGTC
GAACCAGAAA ATTTAGAGAT ACCATCCAAG CTGCCTCAAA TTTTGCCCAA AGGAATCAAT TGCCTCATCG GTTGCAAGAC
CAAATGCTTG CCCACTTGTG TTTGAAGTAT AGAACCGACT CGGAAGGGTT GCAGCAGCAA GAGACACTTG ATTCTCTTCC
TAAGGCCATC AGATCCAGCA TTTCACATTA TCTTTTCAAT TCTCTGATTG ATAAGGTCTA CTTGTTTAAG GAGGTTTCGA
ATGACTTGCT CTTTCAATTG GTATCAGAGA TGAAAGCTGA ATATTTTCCA CCCAAAGAAG ATGTTATCTT GCAAAACGAA
GCCCCCACTG ACTTTTATAT ACTGGTCACT GGTGCCGTGG AACTGGTAGT TCTTAAAAAT GGGGTTGAAC AGGTTGTTGG
AGAGGCCAAA ACTGGTGATC TTTGTGGTGA GATAGGTGTG CTCTGTTATA AGCCACAGCT TTTCACTGTT CGAACGAAGC
GACTAAGCCA GTTGCTGAGG CTAAATCGTA CTACTTTCCT GAATATTGTT CAGGCCAACG TGGGGGACGG AACCATTATC
ATGAATAATC TGCTTCAGCA TTTGAAAGAG CTCAACGACC CAATCATGGA GGGAGTTTTG GTGGAGATTG AGAACATGCT
AGCTCGTGGT AGAATGGACC TACCAGTGAG TGTGTGCTTT GCGGCAGCAA GAGGTGATGA CTTGTTGTTA CATCAGTTGC
TGAAACGAGG AATGGATCCA AACGAATCCG ACAACAATCG AAGGACAGCT TTGCATATAG CAGCATCTCA AGGGAAAGAA
AACTGTGTTC TGCTTCTGTT AGATTATGGG GCGGACCCCA ACATTACAGA TTTGGACGGT AATGTGGCAC TATGGGAGGC
TATGGTGGGA GGACATGAGT CAGTGAGGAA GGTGTTGGCA GAAAATGGAG CTAACTTGCA ATGTGGGGAT GTGGGCCAGT
TTGCATGTAC CGCTGTTGAG CAGAACAGTT TGAAGTTGCT GAAGGAAATA AGGCGCTACG GAGGAGATAT CACCCTTCCA
AGCATCAACA GTGGGACCAC AGCCTTGCAC GTTGCAGTGT CGGAGGGGAA CGTTGAAATT GTGAAATACC TTTTGGATCA
CGGGGCAAGC ATTGACAAGC CGGACAAGCA CGGCTGGACC GCCAGAGGTC TGGCAGATCA GCAATCTCAT ACAGAAATAA
AAGCCATTTT TGACTCCACT GGGGACCCTA AGGTTCAGTC TTTCGTTACC ATACCCGAGA AGCAGAGTGG GTTCAGGTTC
CTTGGAAGGT TTACTAGTGA GCCAACCATG CCTTCACCCC TTGACGGCTC ATTTCATGGA ACGGATGCCT CTTGGAGCCA
GAGCCAGAGC CAGAACCGTC CAAGGCGTAG GAGCAGCAAT TATCATAATT CACTCTTAGG GATGATGGCA GCAGCACATA
ATGGGGAAAA GGACCTGCTT TTGCCTCTTG ACATGAATAA CAAGGCAAGC AATGTCATGA AGAGTAGTAA TGCAGGTAGT
CCAGCTAGAG TGATTATTAG TTGCCCTGAA AAGGGTGAGG TTGTGGGGAA GCTTGTTTTA CTACCTGGAA GCTTTCAAGA
GCTACTTGAG ATTGGAGCCA AAAAATTTGG TGTCTATCCT GCCAAGGTTT TATGCAAAGA TGGAGGTCAA ATTGAAGATT
TAGAGGTTAT TAGAGATGGT GACCATCTGG TCTTTGTCTG TGCTGGTGGG GTTGTAGAAT CCAAGTGTCC AACTCCAGCA
CCACTTTAG

>Vigan.01G439600.01
MLGCGQEEIE LSRDGSHYSL STGILPSLGA KSNRRIKLRR FILSPYGRRY RIWETFLIIL VFYTAWVSPF EFGFLKKPEP
PLSISDNIVN GFFFVDIVLT FFVAYIDKTT YLIVDDRKQI AWKYARTWLA FDVVSIIPSE LIQKLSPSPL QSYGLFNMLR
LWRLRRVSAL FSRLEKDRNY NYFWVRCAKL ISVTLFAVHC AGCFYYLIAA RYHDPKKTWI GSTMDNFLEH SLWSRYVMSI
YWSITTLTTV GYGDLHPVNS REMTFDIFYM LFNLGLTAYL IGNMTNLVVH GTSRTRKFRD TIQAASNFAQ RNQLPHRLQD
QMLAHLCLKY RTDSEGLQQQ ETLDSLPKAI RSSISHYLFN SLIDKVYLFK EVSNDLLFQL VSEMKAEYFP PKEDVILQNE
APTDFYILVT GAVELVVLKN GVEQVVGEAK TGDLCGEIGV LCYKPQLFTV RTKRLSQLLR LNRTTFLNIV QANVGDGTII
MNNLLQHLKE LNDPIMEGVL VEIENMLARG RMDLPVSVCF AAARGDDLLL HQLLKRGMDP NESDNNRRTA LHIAASQGKE
NCVLLLLDYG ADPNITDLDG NVALWEAMVG GHESVRKVLA ENGANLQCGD VGQFACTAVE QNSLKLLKEI RRYGGDITLP
SINSGTTALH VAVSEGNVEI VKYLLDHGAS IDKPDKHGWT ARGLADQQSH TEIKAIFDST GDPKVQSFVT IPEKQSGFRF
LGRFTSEPTM PSPLDGSFHG TDASWSQSQS QNRPRRRSSN YHNSLLGMMA AAHNGEKDLL LPLDMNNKAS NVMKSSNAGS
PARVIISCPE KGEVVGKLVL LPGSFQELLE IGAKKFGVYP AKVLCKDGGQ IEDLEVIRDG DHLVFVCAGG VVESKCPTPA
PL*