GBrowse Details

Vigan.01G456100.01

Basic Information:
Name: Vigan.01G456100.01
Multiple alignment
Variant Information
Position: Chr01:58633154..58635547 (+ strand)
Length: 2394
Functional Information:
Description: Similar to Uncharacterized protein. [I1JZL5, Glycine max]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: N,N-dimethylaniline monooxygenase activity (GO:0004499)
Molecular Function: flavin adenine dinucleotide binding (GO:0050660)
Molecular Function: NADP binding (GO:0050661)
InterPro: Flavin monooxygenase FMO (IPR000960)
Flavin monooxygenase-like (IPR020946)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,3.27,0.27,0.91,0.48,1.13,1.39
Arabidopsis thaliana homolog: AT5G07800.1, AT5G61290.1
Automatic updates:
Name: NM_001255407 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max flavin-binding monooxygenase family protein (LOC100817010), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:58633154..58633247 (+ strand)
Length: 94
Type: five_prime_UTR
Position: Chr01:58633248..58633803 (+ strand)
Length: 556
Type: CDS
Position: Chr01:58633940..58634010 (+ strand)
Length: 71
Type: CDS
Position: Chr01:58634182..58634340 (+ strand)
Length: 159
Type: CDS
Position: Chr01:58634415..58634497 (+ strand)
Length: 83
Type: CDS
Position: Chr01:58634730..58634865 (+ strand)
Length: 136
Type: CDS
Position: Chr01:58634946..58635119 (+ strand)
Length: 174
Type: CDS
Position: Chr01:58635209..58635400 (+ strand)
Length: 192
Type: CDS
Position: Chr01:58635401..58635547 (+ strand)
Length: 147
Type: three_prime_UTR


>Vigan.01G456100.01
AGAGTTTCTC CATATACTAC ACGTGATTTT ACTTGGTGAG AAAATTGCAC TATAAATCCT TAGTGACGTG TTTCCATATT
CACACATTCA GAACATGGAT TCAGAAAGAA AAGAATCGAA GAGTGTGTGT GTGATTGGAG CGGGACCATC GGGGATAGTG
GTGGCGAGGG AGCTGAGAAG GGAAGGTCAG GAGGTGGTGG TGTTGGAGCA GAACCATGAC ATTGGAGGGC AATGGCTATA
TGACCCAAAT GTAGAAGAAG AGGATGACCC TTTGGGAAGA AACCCTTGGC TGAAGGTGCA CAGTAGCATC TACCAATCTT
TAAGGCTGAT GTCCCCAAGA GAGGTGATGG GCTTCACTGA TTTCCCTTTT TCAGTGAAGA AAGGTAGAGA CCCTAGGAGG
TTTCCTAGCC ACAGAGAGTT CCTTCTCTAC CTCAAGGACT TCTGTGAATG GTTTAAGGTC ACAGAGATGA TCAAGTTCAA
CACAAAGGTG CTTTATGTGG GACCCTTAAA CTATGGTGTC TCTACTCAGG ATTTGAAATG GCTTGTTAGA AGCAAAGAGA
AGGAGAGTAA TAAGGAAGTT GAACAAGTCT TTGACGCTGT GGTTGTGGCC ACTGGCCATT ACTCTAAGCC TAGATTGCCC
TGCATTCAAG GAATGGAGAA ATGGAGAAGA AAACAAATGC ACAGTCACGT TTACAGGTCT CCAGAGCCCT TCCGAGGGGA
GATAGTGGTG GTGGTTGGAA ATTCTTTTAG TGGACAAGAA ATATCAATGG AGCTTGTGAA AGTAGTGAAG GAACTGCACC
TGAGTTCGAA ATCACTTGAG ATTTACGAGG GTTTATCCAA AGTTATATCC AAATACGAGA ACTTTCACCT TCGTCCGCAG
ATCGACAACC TTCGAGAGGA TGGGAGTGTC ACTTTCACGG ACGGTTCCTG CATAATCGCA GACACTATTT TATACTGCAC
TGGGTATGAG TATTCCTTCC CTTTTCTTGA CACAAAGGGA ATGGTTGTTG TGGATGATAA CAGAGTGGGT CCTTTGTATG
AACACACTTT CCCTCCATCA CTTGCACCTT CGCTTTCACT CATAGGCATC CCCAGAAAGA TCCTAGGGCT CCCTTTCTTT
GAGTCTCAAG GAAAATGGAT AGCTCAACTG CTTTCTGGGA AAAAGGTTTT GCCATCATAC GAGGAAATGA TGAAATCAAT
CGACGACTTT TATCATTCAA AAGAGGCTGC TGCTATTCCT AAACGTCACA CCCATGAAAT TGGAGACTTT GAGTACTGTG
ACAAATATGG AGAAAATGTT GGATTTCCAA AGTTGGAAGA ATGGAGAAAA GAGTTGTGCG TATCTTCCGT AGTCAACTAC
TTTGTCAACT TGGAGACTTG TCGTGATTCA TGGTATGATG ATGAGAAGCT TCAAGAAGCT CTGAAATCTC CATACTTCAC
TCAACTTCAA GATCCTTCTT TCTAAAACCT AATTTGCTTA ATAATTATAT GTAATTCTAT TTCTAAGTTC AAAACTTTCT
TAATCTTGAC TCGTCCAAAT CTTTAATTTG GCCAAATGAA ATGTCACCAT AAAAATTTCA TGTAAAATTT GAATACTAAA
ATAAAATCTT CC

>Vigan.01G456100.01
ATGGATTCAG AAAGAAAAGA ATCGAAGAGT GTGTGTGTGA TTGGAGCGGG ACCATCGGGG ATAGTGGTGG CGAGGGAGCT
GAGAAGGGAA GGTCAGGAGG TGGTGGTGTT GGAGCAGAAC CATGACATTG GAGGGCAATG GCTATATGAC CCAAATGTAG
AAGAAGAGGA TGACCCTTTG GGAAGAAACC CTTGGCTGAA GGTGCACAGT AGCATCTACC AATCTTTAAG GCTGATGTCC
CCAAGAGAGG TGATGGGCTT CACTGATTTC CCTTTTTCAG TGAAGAAAGG TAGAGACCCT AGGAGGTTTC CTAGCCACAG
AGAGTTCCTT CTCTACCTCA AGGACTTCTG TGAATGGTTT AAGGTCACAG AGATGATCAA GTTCAACACA AAGGTGCTTT
ATGTGGGACC CTTAAACTAT GGTGTCTCTA CTCAGGATTT GAAATGGCTT GTTAGAAGCA AAGAGAAGGA GAGTAATAAG
GAAGTTGAAC AAGTCTTTGA CGCTGTGGTT GTGGCCACTG GCCATTACTC TAAGCCTAGA TTGCCCTGCA TTCAAGGAAT
GGAGAAATGG AGAAGAAAAC AAATGCACAG TCACGTTTAC AGGTCTCCAG AGCCCTTCCG AGGGGAGATA GTGGTGGTGG
TTGGAAATTC TTTTAGTGGA CAAGAAATAT CAATGGAGCT TGTGAAAGTA GTGAAGGAAC TGCACCTGAG TTCGAAATCA
CTTGAGATTT ACGAGGGTTT ATCCAAAGTT ATATCCAAAT ACGAGAACTT TCACCTTCGT CCGCAGATCG ACAACCTTCG
AGAGGATGGG AGTGTCACTT TCACGGACGG TTCCTGCATA ATCGCAGACA CTATTTTATA CTGCACTGGG TATGAGTATT
CCTTCCCTTT TCTTGACACA AAGGGAATGG TTGTTGTGGA TGATAACAGA GTGGGTCCTT TGTATGAACA CACTTTCCCT
CCATCACTTG CACCTTCGCT TTCACTCATA GGCATCCCCA GAAAGATCCT AGGGCTCCCT TTCTTTGAGT CTCAAGGAAA
ATGGATAGCT CAACTGCTTT CTGGGAAAAA GGTTTTGCCA TCATACGAGG AAATGATGAA ATCAATCGAC GACTTTTATC
ATTCAAAAGA GGCTGCTGCT ATTCCTAAAC GTCACACCCA TGAAATTGGA GACTTTGAGT ACTGTGACAA ATATGGAGAA
AATGTTGGAT TTCCAAAGTT GGAAGAATGG AGAAAAGAGT TGTGCGTATC TTCCGTAGTC AACTACTTTG TCAACTTGGA
GACTTGTCGT GATTCATGGT ATGATGATGA GAAGCTTCAA GAAGCTCTGA AATCTCCATA CTTCACTCAA CTTCAAGATC
CTTCTTTCTA A

>Vigan.01G456100.01
MDSERKESKS VCVIGAGPSG IVVARELRRE GQEVVVLEQN HDIGGQWLYD PNVEEEDDPL GRNPWLKVHS SIYQSLRLMS
PREVMGFTDF PFSVKKGRDP RRFPSHREFL LYLKDFCEWF KVTEMIKFNT KVLYVGPLNY GVSTQDLKWL VRSKEKESNK
EVEQVFDAVV VATGHYSKPR LPCIQGMEKW RRKQMHSHVY RSPEPFRGEI VVVVGNSFSG QEISMELVKV VKELHLSSKS
LEIYEGLSKV ISKYENFHLR PQIDNLREDG SVTFTDGSCI IADTILYCTG YEYSFPFLDT KGMVVVDDNR VGPLYEHTFP
PSLAPSLSLI GIPRKILGLP FFESQGKWIA QLLSGKKVLP SYEEMMKSID DFYHSKEAAA IPKRHTHEIG DFEYCDKYGE
NVGFPKLEEW RKELCVSSVV NYFVNLETCR DSWYDDEKLQ EALKSPYFTQ LQDPSF*