GBrowse Details

Vigan.01G464600.01

Basic Information:
Name: Vigan.01G464600.01
Multiple alignment
Variant Information
Position: Chr01:59398849..59403065 (+ strand)
Length: 4217
Functional Information:
Description: Similar to Uncharacterized protein. [K7KML5, Glycine max]
GO: Biological Process: transport (GO:0006810)
Cellular Component: membrane (GO:0016020)
Molecular Function: transporter activity (GO:0005215)
InterPro: Proton-dependent oligopeptide transporter family (IPR000109)
Major facilitator superfamily domain, general substrate transporter (IPR016196)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.11,0.02,16.63,28.89,14.36,5.36,0.91,32.29
Arabidopsis thaliana homolog: AT1G18880.1, AT3G47960.1, AT5G62680.1
Automatic updates:
Name: NM_001251041 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max nitrate transporter NRT1-2 (NRT1-2), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:59398849..59399076 (+ strand)
Length: 228
Type: five_prime_UTR
Position: Chr01:59399077..59399179 (+ strand)
Length: 103
Type: CDS
Position: Chr01:59399263..59399480 (+ strand)
Length: 218
Type: CDS
Position: Chr01:59399673..59400232 (+ strand)
Length: 560
Type: CDS
Position: Chr01:59401886..59402798 (+ strand)
Length: 913
Type: CDS
Position: Chr01:59402799..59403065 (+ strand)
Length: 267
Type: three_prime_UTR


>Vigan.01G464600.01
AAAAGTGTTT TATCTTGGGC ATTTTTGTAC TTGAATTATC TGTTACCAAA AATGTAATGT TTTATCTCAT CCACTTGTTT
TTTTCGGTCT AAGGCCAGGA ACAAGGAAAT AGGTTGATAC TATAAATTCA TAACACCCCG AGGGAAAAAA ACAGAACAAG
GTTGATGAAT ATCAGATAGG TGTTCACAAA ATCTTAACAA TTATTTGCTT CTTCTCTCTG TTTCAGTCAT GAACGTTGTT
GGGAAAAATG AGTCAGACCC AGAGACTATG GAGAAAAATG AGGAGGCAGA GATTAAATAC AGAGGGTGGA AAGTGATGCC
CTTTATCATT GGGAATGAAA CTTTTGAGAA GCTGGGAACC ATTGGTACCT TAGCCAATCT CTTAGTCTAT CTCACAACTG
TTTTCAATTT GGACAGTATC ACTGCAACAA ATATTATCAA CATCTTCAAC GGCAGTGCCA GTTTATCCAC TTTGATTGGG
GCTTTTCTCT GTGACACCTA TTTTGGCCGC TACAAGACAC TCGGATTCTG CACAATTGCT TCCTTTCTGG GGCTACTTAT
TATTCAGCTA ACAGCATGGA TTAAGGAAAT GCATCCACCT CAGTGTGGAA GAGATAGCAG CATATGCAAA GGTCCAAACA
CAGGCCAAAT GGCATTTCTG CTGTCTGCAT TTGCATTTCT GATTGTGGGA GCTGCAGGGA TCAGACCTTG TAACTTGGCA
TTTGGAGTTG ATCAGTTCAA CCCCAATACT GAGTCAGGAA AAAAGGGAAT AAACAGCTTC TTCAATTGGT ACTTCTTTAC
CTTCACATTT GCTCAGATGG TATCTCTATC ACTCATTGTG TACGTACAAG CAAACGTAAG TTGGGCTCTG GGTCTGGGAA
TTCCTGCAGC TTTGATGCTC ATCTCTTGCA CACTCTACTA TATGGGAAGC AGATATTATG TCAAAGTTAA AACAAGTGGT
CCAGCTCCAC TAACAACCAT AGTTCAAGCT ATAGTTGTGG CTGCAAAGAA AAGAAGACTC AATCTATCAC AGTATCCATT
GGTTTCCCTC TTTGACTATG TTTCTCCTCA CTCTATGAAC TCCAAGCTTC CTCACACTTC TCAGTTCAGG TTCCTTGACA
AAGCTGCTAT CATAACCCCA GAAGATGGTA TAAACCCTGA CGGGTCTGCT TCTGATCCTT GGAATCTCTG CAGCATGCAG
CAAGTGGAAG AGTTGAAATG TTTGATAAGA GTGATGCCCA TTTGGGTTGC AGGAGTTTTC TTCTACGTTG CCATTGTCCA
ACAGAACACA ATGTTGGTGT TCCAGGCCCT TCAAGCTGAT AGACGCGTTC TCAACAGCAA CTTCAAGATC CCAGCAGCTT
CCTACACTAT CTTCCAGATG CTGACCCTCA CCCTCTGGTT ACCCATCTAT GACCGAATTA TCGTGCCTTC ACTCCAAAGG
TTGACAAAAA AAGAGGGTGG CATCACTGTT CTTCAAAGGA TGGGCATTGG AATGTTTCTC TCTGCATTAT GTGTATTTGT
GTCTGGTGTG GTGGAAGAGA GGAGAAGGAC TATGGCTTTG AGCAACCCTA TTGGAAGAGA GCCAAGAAAA GGTGACATTT
CTTCAATGCC AGCTCTGTGG TTTATTCCTC AGTTAGCACT GGCAGGACTG TCTGATGCAT TTACCCTTGT GGGGCAAGTT
GAATTTTTCT ACAAACAGTT TCCTGAGAAC ATGAAAAGCA TTGCAGCGTC TCTTTTCTTC TGTGGTCTTG CAGGATCGAG
TTATTTGAGT AGTTTGCTGA TTTCTATCAT CCATAAGGTG ACAGCTAAAT CTGCAACTGG GAATTGGTTA CCTCAGGATC
TGAACAAGGG AAGATTGGAT TATTTTTATT ACGTTATAAC AGCTCTTCAA GTCTTCAATT TTGGTTACTT TATACTGTGT
GCCAAGTGGT ATAAATACAA AGGGACTGCT ACTAGCAGCG CTAGTGATCT TCAGCTAGAT CAACTATCCA AACCATCTCA
AAAGACTCTT AACACTGTCT AAGGGTTTTC TCTTCATTCT GTACTTTCTG AATACGTATC AGAAAAACCT TATCAATTCA
GAATCATAGT CTCTCGTGCA AAGTTCATGT CATCTGTAAT TGGAAAAATG GTTCATAATG TTTCTTTGCC AAGAGAATAA
GGCAGCCTTT CTTTTAGGTT TGGATTTGGA ATTAGTTTTA CTGTAAAGCT GCTTAAGGTA GCTATGAAAT TTGAAAGGCT
TGAATGTTTT TAATATTTAA ATAATAGTTT TATATTTGAT CATAACAAA

>Vigan.01G464600.01
ATGAACGTTG TTGGGAAAAA TGAGTCAGAC CCAGAGACTA TGGAGAAAAA TGAGGAGGCA GAGATTAAAT ACAGAGGGTG
GAAAGTGATG CCCTTTATCA TTGGGAATGA AACTTTTGAG AAGCTGGGAA CCATTGGTAC CTTAGCCAAT CTCTTAGTCT
ATCTCACAAC TGTTTTCAAT TTGGACAGTA TCACTGCAAC AAATATTATC AACATCTTCA ACGGCAGTGC CAGTTTATCC
ACTTTGATTG GGGCTTTTCT CTGTGACACC TATTTTGGCC GCTACAAGAC ACTCGGATTC TGCACAATTG CTTCCTTTCT
GGGGCTACTT ATTATTCAGC TAACAGCATG GATTAAGGAA ATGCATCCAC CTCAGTGTGG AAGAGATAGC AGCATATGCA
AAGGTCCAAA CACAGGCCAA ATGGCATTTC TGCTGTCTGC ATTTGCATTT CTGATTGTGG GAGCTGCAGG GATCAGACCT
TGTAACTTGG CATTTGGAGT TGATCAGTTC AACCCCAATA CTGAGTCAGG AAAAAAGGGA ATAAACAGCT TCTTCAATTG
GTACTTCTTT ACCTTCACAT TTGCTCAGAT GGTATCTCTA TCACTCATTG TGTACGTACA AGCAAACGTA AGTTGGGCTC
TGGGTCTGGG AATTCCTGCA GCTTTGATGC TCATCTCTTG CACACTCTAC TATATGGGAA GCAGATATTA TGTCAAAGTT
AAAACAAGTG GTCCAGCTCC ACTAACAACC ATAGTTCAAG CTATAGTTGT GGCTGCAAAG AAAAGAAGAC TCAATCTATC
ACAGTATCCA TTGGTTTCCC TCTTTGACTA TGTTTCTCCT CACTCTATGA ACTCCAAGCT TCCTCACACT TCTCAGTTCA
GGTTCCTTGA CAAAGCTGCT ATCATAACCC CAGAAGATGG TATAAACCCT GACGGGTCTG CTTCTGATCC TTGGAATCTC
TGCAGCATGC AGCAAGTGGA AGAGTTGAAA TGTTTGATAA GAGTGATGCC CATTTGGGTT GCAGGAGTTT TCTTCTACGT
TGCCATTGTC CAACAGAACA CAATGTTGGT GTTCCAGGCC CTTCAAGCTG ATAGACGCGT TCTCAACAGC AACTTCAAGA
TCCCAGCAGC TTCCTACACT ATCTTCCAGA TGCTGACCCT CACCCTCTGG TTACCCATCT ATGACCGAAT TATCGTGCCT
TCACTCCAAA GGTTGACAAA AAAAGAGGGT GGCATCACTG TTCTTCAAAG GATGGGCATT GGAATGTTTC TCTCTGCATT
ATGTGTATTT GTGTCTGGTG TGGTGGAAGA GAGGAGAAGG ACTATGGCTT TGAGCAACCC TATTGGAAGA GAGCCAAGAA
AAGGTGACAT TTCTTCAATG CCAGCTCTGT GGTTTATTCC TCAGTTAGCA CTGGCAGGAC TGTCTGATGC ATTTACCCTT
GTGGGGCAAG TTGAATTTTT CTACAAACAG TTTCCTGAGA ACATGAAAAG CATTGCAGCG TCTCTTTTCT TCTGTGGTCT
TGCAGGATCG AGTTATTTGA GTAGTTTGCT GATTTCTATC ATCCATAAGG TGACAGCTAA ATCTGCAACT GGGAATTGGT
TACCTCAGGA TCTGAACAAG GGAAGATTGG ATTATTTTTA TTACGTTATA ACAGCTCTTC AAGTCTTCAA TTTTGGTTAC
TTTATACTGT GTGCCAAGTG GTATAAATAC AAAGGGACTG CTACTAGCAG CGCTAGTGAT CTTCAGCTAG ATCAACTATC
CAAACCATCT CAAAAGACTC TTAACACTGT CTAA

>Vigan.01G464600.01
MNVVGKNESD PETMEKNEEA EIKYRGWKVM PFIIGNETFE KLGTIGTLAN LLVYLTTVFN LDSITATNII NIFNGSASLS
TLIGAFLCDT YFGRYKTLGF CTIASFLGLL IIQLTAWIKE MHPPQCGRDS SICKGPNTGQ MAFLLSAFAF LIVGAAGIRP
CNLAFGVDQF NPNTESGKKG INSFFNWYFF TFTFAQMVSL SLIVYVQANV SWALGLGIPA ALMLISCTLY YMGSRYYVKV
KTSGPAPLTT IVQAIVVAAK KRRLNLSQYP LVSLFDYVSP HSMNSKLPHT SQFRFLDKAA IITPEDGINP DGSASDPWNL
CSMQQVEELK CLIRVMPIWV AGVFFYVAIV QQNTMLVFQA LQADRRVLNS NFKIPAASYT IFQMLTLTLW LPIYDRIIVP
SLQRLTKKEG GITVLQRMGI GMFLSALCVF VSGVVEERRR TMALSNPIGR EPRKGDISSM PALWFIPQLA LAGLSDAFTL
VGQVEFFYKQ FPENMKSIAA SLFFCGLAGS SYLSSLLISI IHKVTAKSAT GNWLPQDLNK GRLDYFYYVI TALQVFNFGY
FILCAKWYKY KGTATSSASD LQLDQLSKPS QKTLNTV*