GBrowse Details

Vigan.01G470600.01

Basic Information:
Name: Vigan.01G470600.01
Multiple alignment
Variant Information
Position: Chr01:59986145..59990249 (- strand)
Length: 4105
Functional Information:
Description: Similar to N-acetyltransferase, putative. [B9T4P8, Ricinus communis]
GO: Molecular Function: N-acetyltransferase activity (GO:0008080)
InterPro: GNAT domain (IPR000182)
Acyl-CoA N-acyltransferase (IPR016181)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:7.53,2.50,4.09,18.12,0.89,3.36,1.91,3.51
Arabidopsis thaliana homolog: AT4G28030.1
Automatic updates:
Name: NM_001317675 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max N-acyltransferase superfamily protein (LOC100802268), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:59986145..59987354 (- strand)
Length: 1210
Type: three_prime_UTR
Position: Chr01:59987355..59987509 (- strand)
Length: 155
Type: CDS
Position: Chr01:59988765..59988885 (- strand)
Length: 121
Type: CDS
Position: Chr01:59989038..59989133 (- strand)
Length: 96
Type: CDS
Position: Chr01:59989596..59989751 (- strand)
Length: 156
Type: CDS
Position: Chr01:59989892..59990152 (- strand)
Length: 261
Type: CDS
Position: Chr01:59990153..59990249 (- strand)
Length: 97
Type: five_prime_UTR


>Vigan.01G470600.01
ATTTAATTTA TTTACAATGG GTCTGGGCTG CAGTGAGAAA GAAAAAAGAA AGTAAAGGAA GAACTTAAGA GAGAAAGAAG
AGAGGATAAT ACAGAAAATG ACGCTTCTAT CTTTTCTCTG TTCCTGTCCT CCAGTAATTC CGCGCTCATG GTTTCCGTTG
ACGTCTAATA CAAGTGCTTT CTCCGTCAAT TTCAGGACCC AAATCCATTC CTCTGCTTCC ACCAACATTT TCACCCAAAA
TCTCGACACC ACTCTCTTAT CCATCGCTGA ATCTTTCTAC GAGGATGAGC TATGGGCCGC TGCCTGTCTC CGCGTCCGTT
CCTTCCATCA ATTCCGCCCT GACGCCTTCG GAGTCCGAGA TCATATGAGG TACTTGGCTG AGCGCGAGTT CGAAGCACTC
AAGGAGCGTG TTTCGGGGAA AAGAACGGGC TTCAGAAGAG TTTCTTGCAT TAACGCTTCC CTTCCATTGT CCCACATCGC
TTCCCTCTCC CATGATTTAT GCTCTTCTTG TAAGTTTTCT GCTAACGGAG AGGAGCGGAT TGTAGTTGCC ACTCTTGATC
TTAATCAGTG CTTGAGCCTT CCTGATGAAA TTGTGGGGTT GAAGCCTGAG GTCACTGGAG CTGATGTCAC CAGGGCATAC
CTCAGTAATG TATGTGTTGC TGAAGAGGTG CACAGAAATG GGTTGGGTTA TGCACTTCTT GAAGTGTCAA AGTTAGTAGC
CTATGATTGG GGCATAACAG ATTTGTACGT CCATGTTGCT GTCGACAATG AACCAGCAAA GAAATTGTAT ACGAAAAGTG
GGTTTGTCTA TGAAAGTGAT GAACCCGCGT GGCAGGCCCG GTTTCTGGAT CGACCCCGAA GACTTCTACT ATGGTCAGGG
CTTTGAAGGA CCTAATTTAA CAGTGTTGTC GTATATATCT CGTATGTATA TGGTTTACTG TCTATTCTTG TCAAGTAATT
TTCAAAACAG TCAATGTAAC GTGTTTTGCC ATTTTAGCAA ATCTGATTGA CGAGGGTCGT CTTTAAGATA AGATGGCATG
GAATAGCTTC CCTTGATGAT TATATTAAGC ACACATTGTA AGGCTTAAAG CCTTAGAACA TTTGGGAACA TTATAAGAAC
ATATCATAGT CAACTAGAAA GATCAAATTC ATTTACTCCT AGTGTCTTTA TCTACCTCGA AAAATCCCGC GAGTTGTAAT
TCATCAATGA AGATGATTTC TAAAAATATA TTGAAAGAGT ATTTACAAGA TTTCTACTTG AAATTTCCTG GTAAGCAGTA
AATTAATGGA CAACATGAAT TCATCATTCG AGGGACCAAA TTACTGGAGT CAAAATTTGG ATAGCAGCAC GTGAAACGAT
AAATTGAACT GTCACAAAGC CAAATTTGCT GGAGATCAGA TCAATATTCT ATCTTCTTCG AACGTATACA ACAACTGAAG
CTTGAAGATC ACGATCTACC TTGAAGTGAG CGTTAAAAAA TCTTCTTCCC TGTTGTTGAA ATCCCAATGT TAAATAAAAA
GATAAGGACA AATACCAACA TTAAGATGAA TAAAAAAACT GAGAAATAAA CTTAGGACAG TCTAATCAAT TACCTCCCTA
TAATCAAATG AAATTAAAAG GTTCTTCAAC TTTTGTTCTT CTGAGTCAAA TAAAACTATG TGGCTGGCCA TAGACACATT
TTTAGCATAT TCAAACACAA AGGAAACAGG GTCCATCAAG AAACGGTCCG ACTCATCGGG GACTCCTTTC TCTTCACTGC
TAAATAATAT GCATTAACAT GAATTATGAA CTTATTTAAC TTCTAATCAA TATTAGAAGC GATGACAATT CGAACTTCCA
AACCTTGGTG TGCAGTCCAG AAATTGCATT GGCAGGTTAT GATGTAGCAT GGAATAGTAT GGAGTCGCAT GGCAAGGAGT
TAGGAATAGG ATGCTTCTCA CCTTCCCTTG AAGAGCTTCT CTAGCAAGAT GGTTCATGAC ATCCTCAGGT CCTCTCTGTC
AGAAAAGAAA AAATATATTG AATATTGTAG GTTCTTACAT AAGATTGCTT TGCTAAACTC TAGATACAAT AAACAAGCAC
ATCAAATTGA AAGAAG

>Vigan.01G470600.01
ATGACGCTTC TATCTTTTCT CTGTTCCTGT CCTCCAGTAA TTCCGCGCTC ATGGTTTCCG TTGACGTCTA ATACAAGTGC
TTTCTCCGTC AATTTCAGGA CCCAAATCCA TTCCTCTGCT TCCACCAACA TTTTCACCCA AAATCTCGAC ACCACTCTCT
TATCCATCGC TGAATCTTTC TACGAGGATG AGCTATGGGC CGCTGCCTGT CTCCGCGTCC GTTCCTTCCA TCAATTCCGC
CCTGACGCCT TCGGAGTCCG AGATCATATG AGGTACTTGG CTGAGCGCGA GTTCGAAGCA CTCAAGGAGC GTGTTTCGGG
GAAAAGAACG GGCTTCAGAA GAGTTTCTTG CATTAACGCT TCCCTTCCAT TGTCCCACAT CGCTTCCCTC TCCCATGATT
TATGCTCTTC TTGTAAGTTT TCTGCTAACG GAGAGGAGCG GATTGTAGTT GCCACTCTTG ATCTTAATCA GTGCTTGAGC
CTTCCTGATG AAATTGTGGG GTTGAAGCCT GAGGTCACTG GAGCTGATGT CACCAGGGCA TACCTCAGTA ATGTATGTGT
TGCTGAAGAG GTGCACAGAA ATGGGTTGGG TTATGCACTT CTTGAAGTGT CAAAGTTAGT AGCCTATGAT TGGGGCATAA
CAGATTTGTA CGTCCATGTT GCTGTCGACA ATGAACCAGC AAAGAAATTG TATACGAAAA GTGGGTTTGT CTATGAAAGT
GATGAACCCG CGTGGCAGGC CCGGTTTCTG GATCGACCCC GAAGACTTCT ACTATGGTCA GGGCTTTGA

>Vigan.01G470600.01
MTLLSFLCSC PPVIPRSWFP LTSNTSAFSV NFRTQIHSSA STNIFTQNLD TTLLSIAESF YEDELWAAAC LRVRSFHQFR
PDAFGVRDHM RYLAEREFEA LKERVSGKRT GFRRVSCINA SLPLSHIASL SHDLCSSCKF SANGEERIVV ATLDLNQCLS
LPDEIVGLKP EVTGADVTRA YLSNVCVAEE VHRNGLGYAL LEVSKLVAYD WGITDLYVHV AVDNEPAKKL YTKSGFVYES
DEPAWQARFL DRPRRLLLWS GL*