GBrowse Details

Vigan.01G479800.01

Basic Information:
Name: Vigan.01G479800.01
Multiple alignment
Variant Information
Position: Chr01:60877551..60882195 (+ strand)
Length: 4645
Functional Information:
Description: Similar to Uncharacterized protein. [I1LVQ4, Glycine max]
GO: Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672)
Molecular Function: protein serine/threonine kinase activity (GO:0004674)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase domain (IPR000719)
Serine/threonine- / dual specificity protein kinase, catalytic domain (IPR002290)
Serine/threonine-protein kinase, active site (IPR008271)
Protein kinase-like domain (IPR011009)
Protein kinase, ATP binding site (IPR017441)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.07,0.23,11.36,18.40,6.34,6.46,41.80,19.82
Arabidopsis thaliana homolog: AT2G18890.1
Automatic updates:
Name: NM_001251670 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max protein kinase family protein (LOC100305398), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:60877551..60878166 (+ strand)
Length: 616
Type: five_prime_UTR
Position: Chr01:60878167..60878362 (+ strand)
Length: 196
Type: CDS
Position: Chr01:60878443..60878697 (+ strand)
Length: 255
Type: CDS
Position: Chr01:60878842..60878999 (+ strand)
Length: 158
Type: CDS
Position: Chr01:60879122..60879201 (+ strand)
Length: 80
Type: CDS
Position: Chr01:60879308..60879443 (+ strand)
Length: 136
Type: CDS
Position: Chr01:60879599..60879748 (+ strand)
Length: 150
Type: CDS
Position: Chr01:60881555..60881722 (+ strand)
Length: 168
Type: CDS
Position: Chr01:60881723..60882195 (+ strand)
Length: 473
Type: three_prime_UTR


>Vigan.01G479800.01
TTTAATTATG TTATCCTTAA CTAGTTCTTA ACTTGAGTTG GAGAAATTAT TTAAGAAATT CACTTTCATT ACATCAGCAA
TGGAAGAAAT AGTCATGGAA CACGCATGTC TAACTTCTAG ATGGGATTAA GAATGACAGA GATATTTGAT AAACTTATGT
TACTATTACA TTTGTGAAAA GCACGGGTCA CTACTGGTGG CAATTAATTA GGTGAATTAA CAAGATTCAA AGCAAATTAA
GCAGAGAGGA AAGATAATAG GGGTGAGGCT ATCCTATAAG AACCAAAATC GCAACCTCTT TATTCAATCC ATATTTTTCT
TTCTTCGTAC TCTTCTCTCC ACAGTTTAAG TTTTCTTGCC ATTTGTATCT ACAAAAGTTA TCATAGCATA GCATGGATGG
TATTGGAGAA AAAGCATTTC AGCTTCTCTA ATGGTCCCTC CCTAGTACAA GGCACTTCTT CACACCACAA CTTTTCCGAA
GAAAACAAAA CCTAGGAGAG CGCTTGTGGT CTCTCTATGT ATGTGAGACC CAAACGTGGA GTTGCTTCTC TTGTTCTCTG
TTTTCAATTG CTCTGCTCTG CATGAAACAG AGTACCCTGT TGGATTGTTT TTTGCAATGA GGTATATTCG GAGCAACAGC
TTCAAGAGGT TCTTCTCCTT TGGAAGACGT AGTTCAAGGG AGCAAGTTCT GAGTCCTAAT GGTGGAGAAA GTCACGAGAC
TCTTCCGTCT AAAGAAGAGC CTTCTGGAAG ACCCTCTTGG AAGTGCTTCT CTTATGATGA TTTGTTTGAT GCCACAAATG
GCTTCAGCTC AGAAAATTTG GTTGGAAAGG GAGGGTATGC GGAAGTGTAC AAGGGGACAA TGAATGGGGG AGAAGAAATT
GCTGTGAAGA GACTCACAAG AACTTCGAGG GACGAGAGAA AGGAGAAAGA GTTTTTGACA GAGATTGGTA CAATTGGTCA
TGTGAACCAT TCCAATGTGT TGCCTCTTCT GGGGTGTTGT ATTGACAATG GCCTTTACCT TGTTTTTGAG TTATCTTCTA
GAGGTTCTGT TGCATCCCTT CTTCACGATG AAAAGTTGCC CCCTTTAGAT TGGAAAACGA GGCACAAGAT AGCCATTGGA
ACTGCTCGCG GCCTCCACTA CTTGCATAAG GGCTGCAAAA GGAGGATAAT CCACCGGGAC ATTAAGGCAT CAAACATTTT
GTTAACAAAG GATTTTGAGC CACAGATATC TGATTTTGGA CTAGCAAAAT GGCTTCCATC TCAGTGGACT CATCATTCCA
TTGCCCCAAT AGAAGGGACA TTTGGACATT TGGCCCCAGA GTACTACTTG CATGGAGTTG TGGATGAGAA GACAGATGTG
TTTGCCTTTG GTGTGTTCTT GCTGGAAGTA ATCTCTGGCA GAAAACCAGT GGATGGGTCA CACCAAAGCT TACACAGCTG
GGCCAAACCA ATTTTGAACA AGGGTGGGAT TGAAGAGTTG GTAGATCCAA GGCTTGAAGG GACTTATGAT GTTACACAGT
TAAAAAGATT TTCCTTTGCT GCATCTCTCT GCATTCGAGC TTCTTCGACT TGGCGACCCA CCATGACTGA GGTATTAGAG
ATAATGGAAG AGGGAGAAAC AGATATGGAA AAGTGGAAAA TGCCAGAAGA AGAAGAGGAG GAGGAAGAAG AAGAATTCTG
GGGATTTGAG GATCTGGAAT ATGAATACGA TAGCTCATTT TCTATGTCAT TACTTGATTC CATTGGAAGC ACTGGTTAGG
AATTAGACGG TTGTTTGAAG TGTTTGTATA TATAGAAATT TGATGGGTAT TTGATAGTAA TTGAATGTCG GCAACTGGAG
AGGAAAATGA CAGAGAAGGT TGTTCTGATG CAGTAATCAG TTTCAATGAT ATGGTAGTTT TGTGAAACAA GGTATGATGA
TTGGGTCCAA AATGTCTACT CGCTGCAATT TTTTCCACAT GATGTGACTG AACTATCAAT AATATGAGGT TTTAAGCCGT
TTAGACAGAG ACATTCGAAA AAGATTGAGC TTGAAATGAT GCTTCATGCT GTTCCAGGAA GGAGAGGCCG TGATTTCGTG
GATGATTTCA ATTTGCATCT TAATCATATT TTCATTCCTT TTATATATAT ATATATATAT ATATAGACCT TGAATTAAAA
TCACCATGTT AGTAGCTCCA ACATGCGGAA ACTAGTGATT GTATTTCATC TTCTAACATA ATAATCCAGG AG

>Vigan.01G479800.01
ATGAGGTATA TTCGGAGCAA CAGCTTCAAG AGGTTCTTCT CCTTTGGAAG ACGTAGTTCA AGGGAGCAAG TTCTGAGTCC
TAATGGTGGA GAAAGTCACG AGACTCTTCC GTCTAAAGAA GAGCCTTCTG GAAGACCCTC TTGGAAGTGC TTCTCTTATG
ATGATTTGTT TGATGCCACA AATGGCTTCA GCTCAGAAAA TTTGGTTGGA AAGGGAGGGT ATGCGGAAGT GTACAAGGGG
ACAATGAATG GGGGAGAAGA AATTGCTGTG AAGAGACTCA CAAGAACTTC GAGGGACGAG AGAAAGGAGA AAGAGTTTTT
GACAGAGATT GGTACAATTG GTCATGTGAA CCATTCCAAT GTGTTGCCTC TTCTGGGGTG TTGTATTGAC AATGGCCTTT
ACCTTGTTTT TGAGTTATCT TCTAGAGGTT CTGTTGCATC CCTTCTTCAC GATGAAAAGT TGCCCCCTTT AGATTGGAAA
ACGAGGCACA AGATAGCCAT TGGAACTGCT CGCGGCCTCC ACTACTTGCA TAAGGGCTGC AAAAGGAGGA TAATCCACCG
GGACATTAAG GCATCAAACA TTTTGTTAAC AAAGGATTTT GAGCCACAGA TATCTGATTT TGGACTAGCA AAATGGCTTC
CATCTCAGTG GACTCATCAT TCCATTGCCC CAATAGAAGG GACATTTGGA CATTTGGCCC CAGAGTACTA CTTGCATGGA
GTTGTGGATG AGAAGACAGA TGTGTTTGCC TTTGGTGTGT TCTTGCTGGA AGTAATCTCT GGCAGAAAAC CAGTGGATGG
GTCACACCAA AGCTTACACA GCTGGGCCAA ACCAATTTTG AACAAGGGTG GGATTGAAGA GTTGGTAGAT CCAAGGCTTG
AAGGGACTTA TGATGTTACA CAGTTAAAAA GATTTTCCTT TGCTGCATCT CTCTGCATTC GAGCTTCTTC GACTTGGCGA
CCCACCATGA CTGAGGTATT AGAGATAATG GAAGAGGGAG AAACAGATAT GGAAAAGTGG AAAATGCCAG AAGAAGAAGA
GGAGGAGGAA GAAGAAGAAT TCTGGGGATT TGAGGATCTG GAATATGAAT ACGATAGCTC ATTTTCTATG TCATTACTTG
ATTCCATTGG AAGCACTGGT TAG

>Vigan.01G479800.01
MRYIRSNSFK RFFSFGRRSS REQVLSPNGG ESHETLPSKE EPSGRPSWKC FSYDDLFDAT NGFSSENLVG KGGYAEVYKG
TMNGGEEIAV KRLTRTSRDE RKEKEFLTEI GTIGHVNHSN VLPLLGCCID NGLYLVFELS SRGSVASLLH DEKLPPLDWK
TRHKIAIGTA RGLHYLHKGC KRRIIHRDIK ASNILLTKDF EPQISDFGLA KWLPSQWTHH SIAPIEGTFG HLAPEYYLHG
VVDEKTDVFA FGVFLLEVIS GRKPVDGSHQ SLHSWAKPIL NKGGIEELVD PRLEGTYDVT QLKRFSFAAS LCIRASSTWR
PTMTEVLEIM EEGETDMEKW KMPEEEEEEE EEEFWGFEDL EYEYDSSFSM SLLDSIGSTG *