GBrowse Details

Vigan.01G481300.01

Basic Information:
Name: Vigan.01G481300.01
Multiple alignment
Variant Information
Position: Chr01:61025622..61028691 (+ strand)
Length: 3070
Functional Information:
Description: Similar to Uncharacterized protein. [I1MSN5, Glycine max]
GO: Biological Process: metabolic process (GO:0008152)
Molecular Function: methyltransferase activity (GO:0008168)
InterPro: Methyltransferase type 11 (IPR013216)
Uncharacterised protein family, methyltransferase, Williams-Beuren syndrome (IPR022238)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:29.60,39.71,10.11,16.27,18.40,18.27,11.25,14.53
Arabidopsis thaliana homolog: AT5G57280.1
Automatic updates:
Name: NM_001254253 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100801198 (LOC100801198), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:61025622..61025684 (+ strand)
Length: 63
Type: five_prime_UTR
Position: Chr01:61025685..61025783 (+ strand)
Length: 99
Type: CDS
Position: Chr01:61025886..61025961 (+ strand)
Length: 76
Type: CDS
Position: Chr01:61026042..61026125 (+ strand)
Length: 84
Type: CDS
Position: Chr01:61026242..61026297 (+ strand)
Length: 56
Type: CDS
Position: Chr01:61026435..61026491 (+ strand)
Length: 57
Type: CDS
Position: Chr01:61026801..61026850 (+ strand)
Length: 50
Type: CDS
Position: Chr01:61027044..61027196 (+ strand)
Length: 153
Type: CDS
Position: Chr01:61028059..61028191 (+ strand)
Length: 133
Type: CDS
Position: Chr01:61028279..61028446 (+ strand)
Length: 168
Type: CDS
Position: Chr01:61028447..61028691 (+ strand)
Length: 245
Type: three_prime_UTR


>Vigan.01G481300.01
TGAATACATA ATAATGGAGT AGTGGTGGTG TGTGGGTTTT AGGGTTTTTG GAGTTGTGAA AGAATGGCGT CCAGACCAGA
GGTGATTGCG CCGCCGGAGT TATTCTACGA CGATTCCGAA GCTCGAAAGT ATACCTCTTC TTCCCGAATT GTTCAAATTC
AGGCAACGTT GTCAGAGAGA GCCCTTGAAT TACTTGCTTT ACCTGATGAT GGCATTCCAA AATTACTCCT TGATATAGGT
TGCGGTTCGG GACTTAGCGG CGAGACACTC ACGGAGAATG GACACCATTG GATAGGGCTT GACATTTCAG CATCGATGCT
TAATGTTGCG GTGGAGCGGG AGGTTGAGGG TGACCTTTTA CTTGGTGACA TGGGTCAGGG TTTAGGGGTT CGTCCTGGAG
TCGTTGACGG GGCCATCAGT ATATCTGCTG TTCAGTGGTT ATGCAATGCT GATAAGTCCT CTCACAACCC TCGATTAAGA
TTGAAGGCAT TTTTTACATC TTTATATAAA TGCTTATCCA ATGGAGCCAG AGCAGTGTTT CAAGTATATC CTGAAAATAT
AGACCAGCGT GAATTGATTT TAAATGCTGC AATGCATGCT GGATTTGCTG GTGGCATAGT GGTGGATTTT CCACACAGTT
CTAAGAGGAG AAAAGAGTTC CTTGTTCTCA CGTGTGGTCA ACGTTCAGTA AATTCATCCG TGGCCAAAGG TAAAAATGAA
GATGGGGAGA GTTGCTCTGA CGAGGACAGT GAGGATGAAG AAAATCAGAC AGTATGCATC TCAGATAGGC ATAGACCGCG
GAAGAAACAG AAAAAGAACA ATAAGAGTGG GAAGGGAAAG GAATGGATAC TAAGGAAGAA GGAGCAGATG AGAAGAAGAG
GAAATGCCGT CCCTCAGGAT AGCAAGTACA CAGGTCGGAA AAGGAAGGAC AGATTTTGAT CTTGTCTGGC ATTTGCCTCT
GTACCAAGTC TTTTTTCGAT GGAGAGCCTT AAAGGATATT TATGAAGAAT GTCCGAATAT CAATTTTGTT TTTTTTTTTG
TGGTTCTTGT GCAATTTAGG ATTATGATTT TGTATTTGTT TTTAATTATA AAAACAGGTA AATATCATTG TCTCATTAGT
TGTTTGTATT ATTTGGCAAC CGTATGCATT TAATTGTTGA TGCTCACAAT TCCAGAGTAC AACT

>Vigan.01G481300.01
ATGGCGTCCA GACCAGAGGT GATTGCGCCG CCGGAGTTAT TCTACGACGA TTCCGAAGCT CGAAAGTATA CCTCTTCTTC
CCGAATTGTT CAAATTCAGG CAACGTTGTC AGAGAGAGCC CTTGAATTAC TTGCTTTACC TGATGATGGC ATTCCAAAAT
TACTCCTTGA TATAGGTTGC GGTTCGGGAC TTAGCGGCGA GACACTCACG GAGAATGGAC ACCATTGGAT AGGGCTTGAC
ATTTCAGCAT CGATGCTTAA TGTTGCGGTG GAGCGGGAGG TTGAGGGTGA CCTTTTACTT GGTGACATGG GTCAGGGTTT
AGGGGTTCGT CCTGGAGTCG TTGACGGGGC CATCAGTATA TCTGCTGTTC AGTGGTTATG CAATGCTGAT AAGTCCTCTC
ACAACCCTCG ATTAAGATTG AAGGCATTTT TTACATCTTT ATATAAATGC TTATCCAATG GAGCCAGAGC AGTGTTTCAA
GTATATCCTG AAAATATAGA CCAGCGTGAA TTGATTTTAA ATGCTGCAAT GCATGCTGGA TTTGCTGGTG GCATAGTGGT
GGATTTTCCA CACAGTTCTA AGAGGAGAAA AGAGTTCCTT GTTCTCACGT GTGGTCAACG TTCAGTAAAT TCATCCGTGG
CCAAAGGTAA AAATGAAGAT GGGGAGAGTT GCTCTGACGA GGACAGTGAG GATGAAGAAA ATCAGACAGT ATGCATCTCA
GATAGGCATA GACCGCGGAA GAAACAGAAA AAGAACAATA AGAGTGGGAA GGGAAAGGAA TGGATACTAA GGAAGAAGGA
GCAGATGAGA AGAAGAGGAA ATGCCGTCCC TCAGGATAGC AAGTACACAG GTCGGAAAAG GAAGGACAGA TTTTGA

>Vigan.01G481300.01
MASRPEVIAP PELFYDDSEA RKYTSSSRIV QIQATLSERA LELLALPDDG IPKLLLDIGC GSGLSGETLT ENGHHWIGLD
ISASMLNVAV EREVEGDLLL GDMGQGLGVR PGVVDGAISI SAVQWLCNAD KSSHNPRLRL KAFFTSLYKC LSNGARAVFQ
VYPENIDQRE LILNAAMHAG FAGGIVVDFP HSSKRRKEFL VLTCGQRSVN SSVAKGKNED GESCSDEDSE DEENQTVCIS
DRHRPRKKQK KNNKSGKGKE WILRKKEQMR RRGNAVPQDS KYTGRKRKDR F*