GBrowse Details

Vigan.01G483200.01

Basic Information:
Name: Vigan.01G483200.01
Multiple alignment
Variant Information
Position: Chr01:61257113..61261493 (+ strand)
Length: 4381
Functional Information:
Description: Similar to Uncharacterized protein. [A0A059CK91, Eucalyptus grandis]
InterPro: Macrophage migration inhibitory factor (IPR001398)
Tautomerase/MIF superfamily (IPR014347)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:2.48,2.39,9.86,23.81,12.71,23.74,4.92,14.09
Arabidopsis thaliana homolog: AT5G57170.2
Automatic updates:
Name: NM_001251234 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306650 (LOC100306650), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:61257113..61257239 (+ strand)
Length: 127
Type: five_prime_UTR
Position: Chr01:61257240..61257350 (+ strand)
Length: 111
Type: CDS
Position: Chr01:61257648..61257848 (+ strand)
Length: 201
Type: CDS
Position: Chr01:61261087..61261122 (+ strand)
Length: 36
Type: CDS
Position: Chr01:61261123..61261493 (+ strand)
Length: 371
Type: three_prime_UTR


>Vigan.01G483200.01
GTTCGAAATT AGTTGGTGAT TGATATATAT ATATATATAT ATATATATAT ATACTGGAGT GAAGAAATGA TGTTCGTATC
AGAGAGATAA GTTATCCCAA AGCCACTCAC TGGTGCGTAT TGCAGCAATG CCTACTTTGA ATCTCTTCAC AAATGTGCCT
GTTGACACCG TCGTTGCTTC TGACATCCTC AGAGATGCCA CAAAAGCTGT TGCAAAGATC ATTGGAAAAC CCGAATCCTA
TGTGATGATT TTGGTGAATG GGGGAGTGCC CATAGAATTT GCTGGAACTG AAGAGCCGGC TGCTTATGGA GAATTGATCT
CAATTGGGGG CCTTGGTCCA AGTGTAAATG GAAAATTGAG TTCTACCATT GCAGAAATTC TTCAAACTAA GCTTTACATT
GACAGTTCCC GATTTTATAT CAAGTTTTAT GATGTTCAGC GCTCATTCTT TGGGTTCAAT GGCTCAACCT TTTGATTTAA
CTTTCTTTCT AGGCGCATAT ATTTGTGGAG TTTCACGGGG AAAAAATCAT CTTCCTTTGG ATTATTGTAA TTCTGTATGC
ATGTTTGTAT TAATGAATAC AGTAGTTTAT TAAAAGGGAA AAAGCGTCTT CCTTTGTTCC CCATTTTTAT GCTTTAGCGA
TTCATGCCTG CAATTTATTT ATCTTCATGT TGGCTCTGAA TCTTAATGAG CTTCATAAAC CATATAGTGG TTAACGGAAA
CGGATTCCAC TGTTGCCAAT ATTGTGAGTG TAGCTTTGCT GCATTTTGTC GGAAATGTTA ACAACTCTAA CCATGTCAAG
AAGAAAATTG CAGTGAATAC ACTCTTGACA TTTTCTCTTC TGCGTT

>Vigan.01G483200.01
ATGCCTACTT TGAATCTCTT CACAAATGTG CCTGTTGACA CCGTCGTTGC TTCTGACATC CTCAGAGATG CCACAAAAGC
TGTTGCAAAG ATCATTGGAA AACCCGAATC CTATGTGATG ATTTTGGTGA ATGGGGGAGT GCCCATAGAA TTTGCTGGAA
CTGAAGAGCC GGCTGCTTAT GGAGAATTGA TCTCAATTGG GGGCCTTGGT CCAAGTGTAA ATGGAAAATT GAGTTCTACC
ATTGCAGAAA TTCTTCAAAC TAAGCTTTAC ATTGACAGTT CCCGATTTTA TATCAAGTTT TATGATGTTC AGCGCTCATT
CTTTGGGTTC AATGGCTCAA CCTTTTGA

>Vigan.01G483200.01
MPTLNLFTNV PVDTVVASDI LRDATKAVAK IIGKPESYVM ILVNGGVPIE FAGTEEPAAY GELISIGGLG PSVNGKLSST
IAEILQTKLY IDSSRFYIKF YDVQRSFFGF NGSTF*