GBrowse Details

Vigan.01G495000.01

Basic Information:
Name: Vigan.01G495000.01
Multiple alignment
Variant Information
Position: Chr01:62413460..62420445 (- strand)
Length: 6986
Functional Information:
Description: Similar to guanine nucleotide-binding protein subunit gamma 3-like. [XP_004508000.1, Cicer arietinum]
GO: Biological Process: G-protein coupled receptor signaling pathway (GO:0007186)
Cellular Component: heterotrimeric G-protein complex (GO:0005834)
Molecular Function: signal transducer activity (GO:0004871)
InterPro: G-protein gamma-like domain (IPR015898)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.07,1.68,0.62,1.72,2.24,0.29,0.62
Automatic updates:
Name: NM_001255299 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100783447 (LOC100783447), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:62413460..62417382 (- strand)
Length: 3923
Type: three_prime_UTR
Position: Chr01:62417383..62417776 (- strand)
Length: 394
Type: CDS
Position: Chr01:62418370..62418414 (- strand)
Length: 45
Type: CDS
Position: Chr01:62418495..62418539 (- strand)
Length: 45
Type: CDS
Position: Chr01:62418647..62418699 (- strand)
Length: 53
Type: CDS
Position: Chr01:62419413..62419562 (- strand)
Length: 150
Type: CDS
Position: Chr01:62419563..62420445 (- strand)
Length: 883
Type: five_prime_UTR


>Vigan.01G495000.01
CTGAGGTATT CCCATCGTGC TTTTCGCTTG GTCTCTGCAA CACCACCCCC ACACTCCTCA CTCTCTGCTA GCTCGCTGCC
TCCACTGAAC CACCACCACA TCACAAAACA AAACAAATAC ATTAAATAAA CAAAACAAGC AAAACCATTT TTCACTGTGA
CACTATCACA CTCACACACA CACCCATTGC ATTTCTCACT TGATTTCTTT GCCTAAACGA AACCTCAAAT CTCAATCAAA
CCTTCAATCA AAACCCCTTC AAATTTGCTA AATAGGTTCG TACAGAAACT TGCAGTGGCA GGCTTTCTCT CAGCCGTCTT
TACTATTTAT AATTAATACC CTTTACCATT ATTATTACCT TACATACCAC ACCATGCACA AAAGATGTGC CTCTCTCCAT
TCTTCTCACC CTCTTCTTCT CACATATTCT TCTTTTTCAA TTTCTATTTT CTCTTTCTCC CTCCCACACT CGTGCCCTCT
CTGCCCACTC CACAATAATG ACTCTCTTTC TACCTTCATT ATCACTCTTT TCAGTTACTG CTTTTTTTCC TTTCCAAATT
CAATTCAACT CAAACCCCTT AACACAAGTT TGGATTTTGG TTTAATTATT AGTTTATTAG TATTTTTCTG GGTTCTGGGT
GTTTCTTAAT TATCCCTTGT CAGAGGCCCT ATTTACTGCC CCTGCCACAG TCTTTTCGTA TGGTATTCAC ACCTAACCTC
ATTTGCCGCT TCTTCTTTGT CACTTACCAT TACTGTTACT TGTGCCCCCT TCCTTAGTGC ATCAACAAGG ACTTCTGCTA
TTACTGCCTG CTACTCCTGC CATTTCTTGT TCTGTCCATT TCACCCTCCC TCTCTCTCTC TCTCTCTCTC CTCTCTCTCT
TCCATGGCCA CCACTCCCAC TCTGCGTTCT TCTTCCGTCC CCTCTCTGCC TCCTCCTTCC CCCAAATCCC CGCCGGAGTA
CCCAGATTTG TATGGGAAGC GCCGTGAAAC AGCCAGGGTT CACATGCTCG AGAGGGAAAT CACTTTTCTC GAGGAAGAAT
TGAAATCTGT TGAGGGTCTT CAACCAGCTT CAAGATGCTG CAAAGAGGTT GCTGATTACG TTATGGCAAA CGCAGATCCT
CTGTTACCTA CAACCAAGAA GAACAGCCGG TCATGCCGCT TCTGGAAGTG GCTCTGTGGC ATGCCCTGTT TTAACCTCTC
TTGGATCTGC TGCTGCTGTT GCTGCTGTGA AGGATTATCT TTACCACTAA AATTGCCACG CTGCTGTTGT GACTGCAAAC
CATGCAGTTG CAGTTGCAGT TGTCTTCCAT CCATCAAATG CTGCTCCTTA CCAAAGTGGA GCTGTTGCTG CTCTTGCTCC
AAATCATATT TCTGTAAAGA GAGCTGTGGT TTTGGAAATT GTTGTACTCT CCCACGTAGT TGCAATTTTG GGTGCCCAAC
TTGTCCATCT TGCCCCTCTT GCTGCAGTTG CAAATGCACC TGCACATGCT CTTGCCCAAG CTGTCCAAAG GTAACCTCAT
GTTGCTGTTG TACAAAGTCA TGTTGGAGAC CATGTTGTTT ATGTTGCTAG TATATTCTTT CCAAAAGGAA AAGCAAAAAA
AAAAAAAATC TGAAGCTTTT GTTATCAAAA TTGCATTCAT AATAGCTAGA GTATAAATTT TGGAAATATA AAGGGTTATA
AATGTTGTAA GTTAGATTGT GCGCTATATG GATACTCCAA GCAAATGTAG TAGCTCCGTT TGTAATTGTG GGTCAGATAA
GTTCGACCCT CTGCTGTTGT CAATCTCCAA TGTTGTGCGA GTGAAGTGAA AGACCCAAAT AGTAGAAAAT GACTATTGAT
TACGATTGCA TGCTATGATC AGCTTAATCA ATGTTTGTTC CATTTTTTTT AAATGCAAAA AGAAGTGTAG TATATGTGTT
ATAATATCAA ACTCTTCGTT TTAATGGACC TTGATGACTA AGCTAAAGGT GGTTGAACTC TTGGTACATG CTGTAACCCC
TGTAAGCTTC CTGAAAACAC GATAAGGATA AAGCGTTTTA TCTCCGAAAA CAGAAATGAA AAAGTGTTTT CTTTTTTGTC
TTATTGATTT TTTTTCCTCT AAGTTTCAAT CCCTGTGGTC CTACCAGAAA GTTGATGATC GACTAAATAA TCAAATGGCA
AGGCAGAAAA ATAAGTGATT GCTGTGAACT ACCTTTTTCT GCATAACTGA CAGAGGACAC AGGACACAGG AAATGTCTTT
TCATTTGGTA CACCGATTAG TAGCCATTCA TGGCCGAGAT CGTTTGGAAT AAGACCCTTC GAAATAACTA GTAATTAGTA
ATTCAGAGGA AGCGTTAACT TTGAAATGAC CGTGTGTAGT ATGTACTGCG GTAGAACATG CCACCACCTT TAACTGCAGG
CCTGTACCAA ACAGGAAGAA AAAAAATGCA TCAGTTGCAC ATGGGTGCTC AGGAGCGCAA AATTGTCCGT GATCTGTTTC
CATATTTGTG AAATCGGTCA CCAGATCCCG GGATCAGTGA AAAACTCAAA AATATGGTCG TTACTTACAT CTCCCTGTCT
TTTTTACTCT ACCTCTGCTT CAGTTTGAAT GCTTCTAATC ACTAAACCTT TGGATAAAAC TTATATATTA AGGAGGGAAT
TTAGATGGTG AAAATCTAAA ACTTTGACAT TAATAGTGGA AGGAAGGCGT TGTTGCATTA TGGCACGTGA TGAGGTGTTG
TGTTAACGAC TGTCGTGTTG CAATAGCTTG TAGAATATGT TATTACAACA AGTTCGGTCT GGAGTGATGG CAACAGCAAT
GTGCCTAAAG ACTGGTAAAG TCATGCATGC AGCTTCTTTG CTTTAAACTC TACAGCCTAT GGCCTACTAG ATAATAATAA
GTGTGCACAT TCACAATAAA ACCTCAAAAA TATGTCCATG TGAAAGCAAC CGGGCTCCTA ACTTTGTGTT CTTCATTGCT
CCACATGATG CTACCAAATT CAGAAGCAGC CGAATCATTA ACACTCCTAT TCGACACAAA GGTCACCGTG TACGTTTGTC
GATCCCCCAC TTCTGTAAAC GAAACCCTGT AAGGATTCAC CGTTATCTCC ACAGAGGATG GCGCGCTAAC CTCCACGTCA
TACACAGATG CCGCCTCCCC CACGTTGGTC AACGTGCGCG TGTACCGTAC AACCTTATTG GTTCCGAAAA CGACCGAGAA
AGATGGATAA TTGAGGTCAC CCGGGTCAGC AAATTTTGTG GAACAAATGA CGTTGGGATT CTTAACCACG AGTCTGAGAT
GGTCGAGGGT GTAGTTGAGG GAGCACAAAA AGGCAATGTA GTCCTGTGTG GAGGCATCAT AAACAAGGCC AGGAGATAGG
GCCTTTTGTG GGTTCACATG ACCGGCCCCA TAGGCCCATG GTGTGGAGAG GGCTTCTTCT CCCGTTGCAT CACGAAGCGG
AGACTCTGTG TTGTCGTGGG TATAAGCCGT TGTCATGAGT GCAGATTTGA TCGCACTTGG ACTCCAATCT GGATGCGCTG
CTTTCAACAG CGCAGCCAAC CCACTTATGT GAGGACAAGA CATGGAAGTA CCGGACATGA TGTTGAACCG CGTTTTGCGA
GTGTCTTCAG ACCCAGATGG CCCAACTGCA CCAGACCAAC CTGCTAAGAT GTTCACTCCA GGCCCAATAA TATCCGGTTT
TAGTATCTGG GCCGTCACAC CATTGGGCCC GCGAGAGCTA AACGCCGCCA CCACAGGCGA CGGCCTCACG TTCAACACGG
TCCCACCGAA GGTCAGAACA GCGGTTGGAT TAGGATCCAA CGACGCATAC TCTCTAATCT CATCACCCGC GTTTTCCCCC
ACTGCCACGG CGGCCACAAG ATGACTGTCC GCCACCAGTC CCTCGCCGCT CATCGCTGTG TTCGCCAGTA TCATCCCCAC
CCCGCCCGCG TCGCGCACAA CTGTGCCCTT CTCTACGCGC GCGTTAAGCC CTCTGTCACA AACCACCACC TTCCCGCGCA
CTGTCTCCGG GTCCAGTGAG CCAGGCATGC AAATGCTGCT CGAAGAGTTC GACGGGTCGC TGAAATAAAC CAATCCAACC
GCTTCATCTC CCATACCTTC ACCACTGTAG AGCGAAACGC CGGCAAAGCG TTTCCCGTTC CCAAGAGTAG CGTATGCCGG
AAAATCACGG TCCAGTGTTC CGGCTCCGAC GGTCATGATC CACGGAGCGA CATTAGCAAC AGAACCGCTT CGAGGTCCAG
TATTCCCTGC GGAACACGAA ACGAATATTC CTCTCTCCAC TGCCGCGAAG GCTCCAATAG CAATGGTGTC GAAATAGTAA
GGAACGGAGG AGGAGCCGCC GAGGGAGAGC GAGAGGACAT CGACTCCGTC CTGGATTGCC TGATCCATTC CGGCAAGAAT
GTCGGAGGCG AAACAGCCAT CAGTCCAGCA GACTTTGTAA GCCGCCACGC GCGCCTGCGG CGCCATCCCG CGTGCGGTGC
CGGTGGCGTA ACCTAGAAGC GTGGCGTTGG AGACGACGGA GCCTGCTGCT GTAGAGGCTG TGTGCGTGCC GTGGCCGTCA
CGGTCACGCG GCGAAGCAAT GTCTCTGGGT TTTCTGGAGT TACCAGAAGC CATGAGGTAG CCCTTGGAGA AACTGCGAGC
TCCGATAAGT TTGTTGTTAC AAAGAGAAGG GTCGAAATCA GGTGCGGAGT CGCAGGTTCC CCGCCAGCGC GTGGGGGTTT
GAGGCATTTG GGAATCATCA AAGCTTTGGG ATTCTGGCCA GACGCCAGTG TCAAGGACCC CAATAACGAC GTTGTGTGAT
GCGTGGTGAA GGTCTTCCCA AAACTCAGAA TGGGCCTGGA GGCCCAGGAA CTCAGGGGTG CGTGTGGTGT GTAGCTTGTA
AAGCGTGTCT TCGTATACAC CCAAAACTGA GTCGGAAGTT CTGAGCGCGT GGAGTTGTTG AGGGTCGAGT GTGGCAGCAA
AGCCGTTGTA AACAGAGGTG TAGGCATAAA GGAGAGAGTC TGGAGAAGAA GAGAGCGTGG CAGTGTACCA GTCAAGGTGC
GTGGGGTGCA CGCTAGGATC GTGGCGCTCT TTCATGTGTA CTATGTAACT CTTCCTGGCA GACACCGGCG TGAGTTGGAG
GCCGAGGAGA AGAGAAAGAT AGAAGATGGA AGAAAGCAAA ACTGAAAATA ATTCCATGAC TTGCTGTTCC TTTTGCTTAA
TCACACCATT AGAATGCAAT GCCTCTTCTG AGCTTTCATT TATAAGGAAC ATTTCATCAT ATCTCTTTGT TTAAAAATCC
CGGGCTTTTC AGTTTTTACA ACGGCTTTGC CCCTTCATCC ATCATCAAAT CAAACTCTCT TTTTTTATTA ACACTTCCTC
TTTCCTTTAG CTTAATCTAC TCGTTTCCAA CTTTCACATT TCTTGTTTCA ACAAAAGATT TTAAAAGAAT ATGGTTTTTC
TACAAGTTCA TTAAAGTTGT ACTTAGTATA TACAACTTTT TACTCTTTCA AGT

>Vigan.01G495000.01
ATGGCCACCA CTCCCACTCT GCGTTCTTCT TCCGTCCCCT CTCTGCCTCC TCCTTCCCCC AAATCCCCGC CGGAGTACCC
AGATTTGTAT GGGAAGCGCC GTGAAACAGC CAGGGTTCAC ATGCTCGAGA GGGAAATCAC TTTTCTCGAG GAAGAATTGA
AATCTGTTGA GGGTCTTCAA CCAGCTTCAA GATGCTGCAA AGAGGTTGCT GATTACGTTA TGGCAAACGC AGATCCTCTG
TTACCTACAA CCAAGAAGAA CAGCCGGTCA TGCCGCTTCT GGAAGTGGCT CTGTGGCATG CCCTGTTTTA ACCTCTCTTG
GATCTGCTGC TGCTGTTGCT GCTGTGAAGG ATTATCTTTA CCACTAAAAT TGCCACGCTG CTGTTGTGAC TGCAAACCAT
GCAGTTGCAG TTGCAGTTGT CTTCCATCCA TCAAATGCTG CTCCTTACCA AAGTGGAGCT GTTGCTGCTC TTGCTCCAAA
TCATATTTCT GTAAAGAGAG CTGTGGTTTT GGAAATTGTT GTACTCTCCC ACGTAGTTGC AATTTTGGGT GCCCAACTTG
TCCATCTTGC CCCTCTTGCT GCAGTTGCAA ATGCACCTGC ACATGCTCTT GCCCAAGCTG TCCAAAGGTA ACCTCATGTT
GCTGTTGTAC AAAGTCATGT TGGAGACCAT GTTGTTTATG TTGCTAG

>Vigan.01G495000.01
MATTPTLRSS SVPSLPPPSP KSPPEYPDLY GKRRETARVH MLEREITFLE EELKSVEGLQ PASRCCKEVA DYVMANADPL
LPTTKKNSRS CRFWKWLCGM PCFNLSWICC CCCCCEGLSL PLKLPRCCCD CKPCSCSCSC LPSIKCCSLP KWSCCCSCSK
SYFCKESCGF GNCCTLPRSC NFGCPTCPSC PSCCSCKCTC TCSCPSCPKV TSCCCCTKSC WRPCCLCC*