GBrowse Details

Vigan.01G534100.01

Basic Information:
Name: Vigan.01G534100.01
Multiple alignment
Variant Information
Position: Chr01:65658028..65661367 (- strand)
Length: 3340
Functional Information:
Description: Similar to Uncharacterized protein. [I1KN93, Glycine max]
GO: Biological Process: protein dephosphorylation (GO:0006470)
Biological Process: dephosphorylation (GO:0016311)
Molecular Function: protein tyrosine/serine/threonine phosphatase activity (GO:0008138)
Molecular Function: phosphatase activity (GO:0016791)
InterPro: Dual specificity phosphatase, catalytic domain (IPR000340)
Protein-tyrosine/Dual specificity phosphatase (IPR000387)
Dual specificity phosphatase, subgroup, catalytic domain (IPR020422)
Dual specificity phosphatase (IPR024950)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:5.71,4.78,7.89,6.00,11.99,5.90,6.30,8.43
Arabidopsis thaliana homolog: AT3G23610.3
Automatic updates:
Name: NM_001250379 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306342 (LOC100306342), transcript variant 1, mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:65658028..65658746 (- strand)
Length: 719
Type: three_prime_UTR
Position: Chr01:65658747..65658912 (- strand)
Length: 166
Type: CDS
Position: Chr01:65660280..65660400 (- strand)
Length: 121
Type: CDS
Position: Chr01:65660738..65660873 (- strand)
Length: 136
Type: CDS
Position: Chr01:65660966..65661091 (- strand)
Length: 126
Type: CDS
Position: Chr01:65661092..65661367 (- strand)
Length: 276
Type: five_prime_UTR


>Vigan.01G534100.01
GAAGGATTTT GATGACGAAG AAAAAGGGAA GAAAGCAATA AGTTTGTTAC AAATATTTCA CAGCAATCAA TTTGCACGCT
TTGTTGGTAA GTTCTTCTCC TTCCTCGCAA AACACTATAT CGCATTCACA TCCATCTGCT CTAATCGTAA CCTTTTTTAC
CAGAATATTT TGCAATCAGT TTGTGTTCCG TGTTCGATTT TCATTTCTTA TTTATTGACT ACCAACGATT CATGTTAATA
TTGAATTGAT GTTTATTGTT TTAAAGGGGA TCGAGAATGA GCACCTCAGC GGCTATAGAA CAATTTGACA AATGCATGAA
TGGGCAAATA GAAGTTATCG CACGGGTTTG GCATTTATTT CAAGCCTACA AAAAGGACAA AAGTCCTTTC AAAATAGATG
AGGGTCTGTA TTTGGGTTCG ATTGGCACTG CAGTTAACAA AGCTTCTTTG AAAGACCATA ATATTACTCA CATTTTGACT
GTGGCTGGTA GAATACCACC TGCACATCCT GATGATTTTG TCTATAAAAT TATACATGTT GTTGACAAAG ACGATGAAGA
CTTAAGACAA TACTTCAATG AGTGTTTTGA TTTTATTGAT GAAGCCAAAA GACTCGGTGG AGGTGTTTTG GTTCACTGTT
TCGCTGGAAG ATCAAGGAGT GTGACTATAG TTGTTGCATA TCTGATGAGG ACTCGTGGAA TGAGCCTTTC TGAAGCTCTG
CAACATGTAA GGAGTATACG ACCAGAAGCA CGTCCCAATC AGGGTTTTAT TTGTCAGCTG GAGGACTTCG AAAAGTCTCT
TCAAGGTGCC TCTAAGTCAC TTTAGTCTCT TTATTTCAAT TGCATCCTAA CTTGATGCAT TATTCATAAG CTCATCTGAA
ATATATTGAA CCATCAAGAT ACATTTAAAA TTACACATCG TTGCATGTAA GGAGATGAAA TCTGTAATGA TAGCTTAAAC
CTAACGATTT TACGTGCACA CTGTTAATCT AGTAGAATGT GCATGATAAA GAAAGTAAAG AGTTTTGTTT TCAATTAATC
ACAACTGTTG CAATTGTCAA ACATTTTGCA TGTCGGAACA CAATCACATA CTTCAATTTA TTATTAGCCG ATGAGATGAT
ACCTCAGAAC ATAATACGTT TATGTTAATC CTCATCTTCC GTGAAACCAT ATTTCACAGC CTTGTGTTTC TCTTTTTATT
TCTCGGAATC CAAATATTAT TACACGACAT TATGAAGATG AAGAGTAGGT GGCTTTTGGA ATAAAAAGTC GTTTTCTTCC
CAAGTAATTG TTTTTGGAAA TGGGATTAAG ATTAAGATTA AGAATATGAT TCCTGAAGAA AATTGCAGAG CACATTCAGT
TGCTACGGGA AAGCTTAGTA ACTTTACAAT CACCCATGGG AATGTTTTAT TGACAAAGTG ATTAAAACAT CTTTCGCTCA
CCTTTTTCTT ATCCGAGGCT ATTAAAACTG CGATTGTCAA ATTGGTGGTC TGGCTCCACC GAGCATGATC CTACGGGCAA
CTCAAACAAG GCAGTCTTTC AAGC

>Vigan.01G534100.01
ATGAGCACCT CAGCGGCTAT AGAACAATTT GACAAATGCA TGAATGGGCA AATAGAAGTT ATCGCACGGG TTTGGCATTT
ATTTCAAGCC TACAAAAAGG ACAAAAGTCC TTTCAAAATA GATGAGGGTC TGTATTTGGG TTCGATTGGC ACTGCAGTTA
ACAAAGCTTC TTTGAAAGAC CATAATATTA CTCACATTTT GACTGTGGCT GGTAGAATAC CACCTGCACA TCCTGATGAT
TTTGTCTATA AAATTATACA TGTTGTTGAC AAAGACGATG AAGACTTAAG ACAATACTTC AATGAGTGTT TTGATTTTAT
TGATGAAGCC AAAAGACTCG GTGGAGGTGT TTTGGTTCAC TGTTTCGCTG GAAGATCAAG GAGTGTGACT ATAGTTGTTG
CATATCTGAT GAGGACTCGT GGAATGAGCC TTTCTGAAGC TCTGCAACAT GTAAGGAGTA TACGACCAGA AGCACGTCCC
AATCAGGGTT TTATTTGTCA GCTGGAGGAC TTCGAAAAGT CTCTTCAAGG TGCCTCTAAG TCACTTTAG

>Vigan.01G534100.01
MSTSAAIEQF DKCMNGQIEV IARVWHLFQA YKKDKSPFKI DEGLYLGSIG TAVNKASLKD HNITHILTVA GRIPPAHPDD
FVYKIIHVVD KDDEDLRQYF NECFDFIDEA KRLGGGVLVH CFAGRSRSVT IVVAYLMRTR GMSLSEALQH VRSIRPEARP
NQGFICQLED FEKSLQGASK SL*