GBrowse Details

Vigan.02G002400.01

Basic Information:
Name: Vigan.02G002400.01
Multiple alignment
Variant Information
Position: Chr02:201091..205001 (- strand)
Length: 3911
Functional Information:
Description: Similar to Iron-stress related protein. [Q8L8H3, Citrus junos]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:49.75,31.85,22.16,27.90,36.15,21.11,25.92,14.84
Automatic updates:
Name: NM_001248528 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100305698 (LOC100305698), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:201091..201136 (- strand)
Length: 46
Type: three_prime_UTR
Position: Chr02:201137..201336 (- strand)
Length: 200
Type: CDS
Position: Chr02:201820..201867 (- strand)
Length: 48
Type: CDS
Position: Chr02:203118..203306 (- strand)
Length: 189
Type: CDS
Position: Chr02:204601..204632 (- strand)
Length: 32
Type: CDS
Position: Chr02:204719..204795 (- strand)
Length: 77
Type: CDS
Position: Chr02:204796..205001 (- strand)
Length: 206
Type: five_prime_UTR


>Vigan.02G002400.01
GACAAGATCT AATTTTGAAA TATAATCGCA GAGTGACAGA CGACTGAGAT TGAGTGACCC GAATACCCGA TCCATCACAT
CTTAATTATG AATTAGTAAT GATATATATG CTTTCTCTCC TCTTTGAATT CTAATTAAAC TCTTCTCTTT CTCTTTTCTC
TGTCTTTCGT AGAAGACGAG GAAGTAGTAG AGGCAGTTAG AGAAAGATGC TGGAGAATAT TCAGGCTGTT CCGGCGACGG
AATCCGCCCC AGTCGTCAAG CGCTATGCTC CTCCCAACCA GAGAAACCGT TCTGCCAACA GGCGCAAATC ATCTGATCGT
CTTGATCGGA CAAACAGTGT TGGGACTGAG TTAGAAAAGA ATCAAGTCGC TCCTTCAAGA AGTGTTCACA TTCCAGATCA
TGGAGATGCT GGTAGCAGTA ATCTTATTAA CGAAAATCAC CATTCAAGAT TCATAGCTTT AGAAGGGTGT GGTTGCAGTG
CAGCTTCCCA GCTTCTTAAT GATCGTTGGG CAGCTGCAAT GCAATCCTAC AATAATTCCA AAGACTCATC TGACAAGCCA
GTCATGTATT CGAGTGGTGC GTCAGCATGG ACTCAGCAGC AGTTTAGACC TCCTCAGCAG GTAATCACTT TCCCTTACCT
TGTGATTACA TTCTCCTTTT CAGGTTATGC AGCCATCTAT AAGTGCTTCT TCCTCTTGTG TGTCACAGCA GGATTTCCTG
GCAGAACTTC GTCGCCAAAT GCAAAACGCT AATCCTAATT CCACATGATG GCTCACTTGG ATGGCTTGTC TAATAAAG

>Vigan.02G002400.01
ATGCTGGAGA ATATTCAGGC TGTTCCGGCG ACGGAATCCG CCCCAGTCGT CAAGCGCTAT GCTCCTCCCA ACCAGAGAAA
CCGTTCTGCC AACAGGCGCA AATCATCTGA TCGTCTTGAT CGGACAAACA GTGTTGGGAC TGAGTTAGAA AAGAATCAAG
TCGCTCCTTC AAGAAGTGTT CACATTCCAG ATCATGGAGA TGCTGGTAGC AGTAATCTTA TTAACGAAAA TCACCATTCA
AGATTCATAG CTTTAGAAGG GTGTGGTTGC AGTGCAGCTT CCCAGCTTCT TAATGATCGT TGGGCAGCTG CAATGCAATC
CTACAATAAT TCCAAAGACT CATCTGACAA GCCAGTCATG TATTCGAGTG GTGCGTCAGC ATGGACTCAG CAGCAGTTTA
GACCTCCTCA GCAGGTAATC ACTTTCCCTT ACCTTGTGAT TACATTCTCC TTTTCAGGTT ATGCAGCCAT CTATAAGTGC
TTCTTCCTCT TGTGTGTCAC AGCAGGATTT CCTGGCAGAA CTTCGTCGCC AAATGCAAAA CGCTAA

>Vigan.02G002400.01
MLENIQAVPA TESAPVVKRY APPNQRNRSA NRRKSSDRLD RTNSVGTELE KNQVAPSRSV HIPDHGDAGS SNLINENHHS
RFIALEGCGC SAASQLLNDR WAAAMQSYNN SKDSSDKPVM YSSGASAWTQ QQFRPPQQVI TFPYLVITFS FSGYAAIYKC
FFLLCVTAGF PGRTSSPNAK R*