GBrowse Details

Vigan.02G007300.01

Basic Information:
Name: Vigan.02G007300.01
Multiple alignment
Variant Information
Position: Chr02:548077..549893 (+ strand)
Length: 1817
Functional Information:
Description: Similar to Uncharacterized protein. [Q9SDZ0, Glycine max]
InterPro: NmrA-like (IPR008030)
NAD(P)-binding domain (IPR016040)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.02,0.47,57.70,0.09,0.00,0.18,0.59
Arabidopsis thaliana homolog: AT4G39230.1
Automatic updates:
Name: NM_001250708 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max isoflavone reductase homolog 2 (IFR2), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:548077..548226 (+ strand)
Length: 150
Type: five_prime_UTR
Position: Chr02:548227..548418 (+ strand)
Length: 192
Type: CDS
Position: Chr02:548508..548642 (+ strand)
Length: 135
Type: CDS
Position: Chr02:548751..548988 (+ strand)
Length: 238
Type: CDS
Position: Chr02:549077..549280 (+ strand)
Length: 204
Type: CDS
Position: Chr02:549359..549525 (+ strand)
Length: 167
Type: CDS
Position: Chr02:549526..549893 (+ strand)
Length: 368
Type: three_prime_UTR


>Vigan.02G007300.01
TAAAAGTATG TTTAATAAAG ACAATAATTT ATCTACATTT GTGATAGCCA ATAGAGAAAA CAAAAAAAAA GAAAAAGACA
CAAGTAATCG ATGTGGGACT AAATACTTAA TACTTTATAT TTGTATTGTA AGCAAAAAGA AAGTTGAGCA ATGGCAAGGA
ATAGCAGCAA GAGCAAGATT CTGTTCATCG GAGGCACTGG TTACACCGGA AAATTCCTGG TGGAGGCCAG TTCCAAAGCT
GGCCACCCAA CCTTCCTTTT GGTGAGGGAG TCGACTTTCT CCAACCCTGC AAAATCATCC CTCATTCACA ACTTCCAAAG
CCTTGGTGTC AACATTGTTT TCGGAGATTT ATACGATTAC CAAAGTTTGT TGAATGCAAT AAAGCAGGTA GATGTGGTAT
TTTCTACCGT AGCACGCTCG CATCTAGCTG ATCAAGATAA CATCATTTCT GCAATAAAAG AAGCAGGAAA TGTTAAGAAA
TTCTATCCAT CTGAGTTTGG AAATGATGTG GATCGAAATC ATGCAGTCGA ACCGGCGACG ATTGCATATG CAAAGAAGGC
CAAAATTCGT CGAACTATTG AGGCTGAAGG AATTCCTTAC ACTTATGTGT CATGTAACTT CTTTGATGGT CACTTCCTAC
CAACCTTGTC GCAACCTGGA GCTACAACTC CTCCTAGAGA CAAAATTATC ATCCTAGGAA ATGGAAATCC CAAAGCTGTT
TTCAATAAGG AAGAGGATGT TGCTACTTAC ACAATCAATT CAGTTGATGA TCCAAGAACT TTGAACAAAA TTCTCTACAT
TAGACCTCCG AATAACACGT TGTCGTTTAA TGAACTTGTC ACACTTTGGG AGAAGAAGAT TGGTAAAACT CTTGAAAGAA
TCTATGTTCC AGAAGAACAA GTACTAAAGC AGATCCAAGA GTCTTCACCA CCCTTGAATA TTTTCTTGGC ATTTAACCAC
GCTGCTTACG TAAAAGGTGA CCATGCTAAC TTTGAAATTG AGTCTTCTTT TGGAGTGGAA GCTTCAGCTT TATATCCTGA
TGTGAAATAC ACCACAGTGG ATGAGTATCT TAATAACCTT GTGTGAGATA TGCAAGCAAG CTTAGTTGAT ATTATATTCT
TGGTGAAACT TGGTACCCTA TTCAAATATA ATGATATAAT ATCAATTTGT TGCTATCTAT GTCATCGAAA AAGAATGATG
TACCAAGAAT CATGTGTTGT GTTGTACTGT TGCAATTTTA TTATACATAT GTTTTTATCG GAATTTGTGG GGTTGATCGG
AGATGGAAGG AACCTCTTGT CAACGTATAT GCGAACTCTT GATTGTCAAA AATGGAGAGA AGTCCATCTG TAAGGACTTC
CACGGACACT CGAGTCACTG AAAAATTTAC ATGAGTAAAA ACGATTACAA GAAAAGGTGT ATCCCTCTAA TAGTATGTAA
TTATAAGATT TTGT

>Vigan.02G007300.01
ATGGCAAGGA ATAGCAGCAA GAGCAAGATT CTGTTCATCG GAGGCACTGG TTACACCGGA AAATTCCTGG TGGAGGCCAG
TTCCAAAGCT GGCCACCCAA CCTTCCTTTT GGTGAGGGAG TCGACTTTCT CCAACCCTGC AAAATCATCC CTCATTCACA
ACTTCCAAAG CCTTGGTGTC AACATTGTTT TCGGAGATTT ATACGATTAC CAAAGTTTGT TGAATGCAAT AAAGCAGGTA
GATGTGGTAT TTTCTACCGT AGCACGCTCG CATCTAGCTG ATCAAGATAA CATCATTTCT GCAATAAAAG AAGCAGGAAA
TGTTAAGAAA TTCTATCCAT CTGAGTTTGG AAATGATGTG GATCGAAATC ATGCAGTCGA ACCGGCGACG ATTGCATATG
CAAAGAAGGC CAAAATTCGT CGAACTATTG AGGCTGAAGG AATTCCTTAC ACTTATGTGT CATGTAACTT CTTTGATGGT
CACTTCCTAC CAACCTTGTC GCAACCTGGA GCTACAACTC CTCCTAGAGA CAAAATTATC ATCCTAGGAA ATGGAAATCC
CAAAGCTGTT TTCAATAAGG AAGAGGATGT TGCTACTTAC ACAATCAATT CAGTTGATGA TCCAAGAACT TTGAACAAAA
TTCTCTACAT TAGACCTCCG AATAACACGT TGTCGTTTAA TGAACTTGTC ACACTTTGGG AGAAGAAGAT TGGTAAAACT
CTTGAAAGAA TCTATGTTCC AGAAGAACAA GTACTAAAGC AGATCCAAGA GTCTTCACCA CCCTTGAATA TTTTCTTGGC
ATTTAACCAC GCTGCTTACG TAAAAGGTGA CCATGCTAAC TTTGAAATTG AGTCTTCTTT TGGAGTGGAA GCTTCAGCTT
TATATCCTGA TGTGAAATAC ACCACAGTGG ATGAGTATCT TAATAACCTT GTGTGA

>Vigan.02G007300.01
MARNSSKSKI LFIGGTGYTG KFLVEASSKA GHPTFLLVRE STFSNPAKSS LIHNFQSLGV NIVFGDLYDY QSLLNAIKQV
DVVFSTVARS HLADQDNIIS AIKEAGNVKK FYPSEFGNDV DRNHAVEPAT IAYAKKAKIR RTIEAEGIPY TYVSCNFFDG
HFLPTLSQPG ATTPPRDKII ILGNGNPKAV FNKEEDVATY TINSVDDPRT LNKILYIRPP NNTLSFNELV TLWEKKIGKT
LERIYVPEEQ VLKQIQESSP PLNIFLAFNH AAYVKGDHAN FEIESSFGVE ASALYPDVKY TTVDEYLNNL V*