GBrowse Details

Vigan.02G024700.01

Basic Information:
Name: Vigan.02G024700.01
Multiple alignment
Variant Information
Position: Chr02:1786417..1791868 (- strand)
Length: 5452
Functional Information:
Description: Similar to Uncharacterized protein. [I1K7G7, Glycine max]
GO: Biological Process: intracellular signal transduction (GO:0035556)
InterPro: Protein kinase C-like, phorbol ester/diacylglycerol binding (IPR002219)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1191.88,355.72,11.85,6.46,0.05,11.34,0.56,5.99
Automatic updates:
Name: NM_001289342 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max thioredoxin-like superfamily protein (LOC100815038), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:1786417..1786732 (- strand)
Length: 316
Type: three_prime_UTR
Position: Chr02:1786733..1787365 (- strand)
Length: 633
Type: CDS
Position: Chr02:1787936..1788436 (- strand)
Length: 501
Type: CDS
Position: Chr02:1791344..1791466 (- strand)
Length: 123
Type: CDS
Position: Chr02:1791467..1791868 (- strand)
Length: 402
Type: five_prime_UTR


>Vigan.02G024700.01
ACACGGACCT TCCATATCAC GGTGGCCAGA AGATACAGCA ACTAATAATA ACCCATTCGA AAATCACCAC CATACACGTG
GCCTTTATGT TATCCCTTCG CTGACTCCAC TGCACATGGA TGACATCGCG CAATCAAAAA GGCTGCACCA TCATTCCCCA
TGTGTGTGCG GTGTAGGCTG GTATTATCCC GGGGCGCAGA TGAATGCTAC GTGTGAAGGT TTTGGTGTGT GATTTGTGGA
TGCATAGGAT GTAATGATGT GGAAAGAATA TGATTCTATT TCTAATGAAT ATAAGTGTCG AGTGTATGAG AACGCTCGTA
CTCTCCTCCC GGTGCTTTCA TCTCTAGATT GTTACACAGT ACAAAACAAA GAAAAAGAAA AAGAAAAAAG AGAGAGAAAG
TGATGAGAGC GGTGATGAAG GATGAAACTC AAGCTGTGGT GAATGATAAT TCTCACAACG GCAAATTCTC ACATCTCCTT
GCTTCCCAAG ATCGTGATTA TCTTCTTTCT CCAACTGGGG CTCAGGTGAA GGTCAGTGAT CTTGAAGGGA AAGTAGTGGG
GCTATTATTT GGTGCGAATT GGTACCCACC ATGCCGCGTA TTCACCCAAG CCCTAGTTGG AATCTACGAG GAGTTGAAAA
GCCGTTTCCC TCAGTTTGAG ATTGTGTATG TGTCCTCTGA CGAAGACTTG GATGCTTTCA GTAGCTTCTA CGGAAACATG
CCATGGCTAG CGATACCGTT CTCTGATTTG GAAACGAAGA AATGGTTGAC CAGAAAGTAT GAGGTGGAAG CCATTCCGTG
CTTGATTTTG TTGCAACCAG AGGATAGTAA AGATGAGGGA ACAGTTCGCG ACGGGGTTGA ACTTATTTAC CGTTACGGAG
CCGAAGCTTA CCCGTTCTGT AACGAGAGGT TGGAGCAGCT GCGAAAGGAA GACAAAGTGA AGCGTGAAAA CCAGACCCTC
CTTAATTTGC TGTCAAACCA GCATAGAGAC TATGTTCTGA GTCACACTCA CTCTGGCCTT AAACAGGTAC CTGTCGCTTC
TCTAGTGGGT AAAACAATTG CACTCTACTT CTCCGCCGAG TGGTGCGTGC CATGCGCCAA GTTCACTCCC AAAATGATTT
CCGTTTACGA GAAGATTAAG CAGGAGCTAG CGGAGAAGGG AGAGGAAGAC TTCGAAGTTG TGCTGGTATC CAGCGACCGT
GACAAAGCAT CCTTTGAGTC ACACTACAGC AGCATGCCTT GGTTAGCTTT GCCTTTCGGT GATTCCGAGA TGAAGAACCT
CGTTCGACAC TTCAACGTGC AAGGGATTCC ATGGTTGGTG ATCGTAGGTC CTGATGGTAA AACAATAACA GTGCATGGTA
GGAGCTTGAT AAACTTGTAC CAAGAGAACG CGTACCCTTT CACGAACGCC AAAGTGGAGG AACTGGAAAA GAAGCTTGAG
GAAGAGGCGA AGGATCTTCC GGCTCTGGTT TATCACGAAG GTCATCGGCA TGACCTGAAT TTGGTGTCTG ATGGGAACGG
TGGAGGACCC TTTATCTGCT GTGTGTGCGA TGAACAAGGG TCTAGTTGGG CCTACCAGTG TCTCCAATGT GGTTATGAAG
TGCACCCCAA ATGCGTCAGA ACAGTCGACC GTCAGAACAG TGTGTTAATA ACTAATTAAC TTCCTGTTCC AATTAATTCA
ATGTTCTTGT TTGTGGCCAA GAGGGTGAAA ACTTATATAT ATATATAAAC ACAGATATAA ATATATAGCT CTATGGGTGC
TTTTCTTCTT GTTGGGAATA TATGTGGCTG AAAGAAAATG ACAATATTGA TAAAAGATAA AGGAGATACT ACCATCGAGA
ATGAGTGGAA ACGGACGTGA TCTGAATTTA GGTTTGAAGT TTGATTTTCT GTCGGAAAAA TGGCCATTCC TTGTTCTTAA
AAGATCAAGA CGTCATCAAC TATTGTTATT CATAGCATTA GAAGGTGCTG TTACG

>Vigan.02G024700.01
ATGAGAGCGG TGATGAAGGA TGAAACTCAA GCTGTGGTGA ATGATAATTC TCACAACGGC AAATTCTCAC ATCTCCTTGC
TTCCCAAGAT CGTGATTATC TTCTTTCTCC AACTGGGGCT CAGGTGAAGG TCAGTGATCT TGAAGGGAAA GTAGTGGGGC
TATTATTTGG TGCGAATTGG TACCCACCAT GCCGCGTATT CACCCAAGCC CTAGTTGGAA TCTACGAGGA GTTGAAAAGC
CGTTTCCCTC AGTTTGAGAT TGTGTATGTG TCCTCTGACG AAGACTTGGA TGCTTTCAGT AGCTTCTACG GAAACATGCC
ATGGCTAGCG ATACCGTTCT CTGATTTGGA AACGAAGAAA TGGTTGACCA GAAAGTATGA GGTGGAAGCC ATTCCGTGCT
TGATTTTGTT GCAACCAGAG GATAGTAAAG ATGAGGGAAC AGTTCGCGAC GGGGTTGAAC TTATTTACCG TTACGGAGCC
GAAGCTTACC CGTTCTGTAA CGAGAGGTTG GAGCAGCTGC GAAAGGAAGA CAAAGTGAAG CGTGAAAACC AGACCCTCCT
TAATTTGCTG TCAAACCAGC ATAGAGACTA TGTTCTGAGT CACACTCACT CTGGCCTTAA ACAGGTACCT GTCGCTTCTC
TAGTGGGTAA AACAATTGCA CTCTACTTCT CCGCCGAGTG GTGCGTGCCA TGCGCCAAGT TCACTCCCAA AATGATTTCC
GTTTACGAGA AGATTAAGCA GGAGCTAGCG GAGAAGGGAG AGGAAGACTT CGAAGTTGTG CTGGTATCCA GCGACCGTGA
CAAAGCATCC TTTGAGTCAC ACTACAGCAG CATGCCTTGG TTAGCTTTGC CTTTCGGTGA TTCCGAGATG AAGAACCTCG
TTCGACACTT CAACGTGCAA GGGATTCCAT GGTTGGTGAT CGTAGGTCCT GATGGTAAAA CAATAACAGT GCATGGTAGG
AGCTTGATAA ACTTGTACCA AGAGAACGCG TACCCTTTCA CGAACGCCAA AGTGGAGGAA CTGGAAAAGA AGCTTGAGGA
AGAGGCGAAG GATCTTCCGG CTCTGGTTTA TCACGAAGGT CATCGGCATG ACCTGAATTT GGTGTCTGAT GGGAACGGTG
GAGGACCCTT TATCTGCTGT GTGTGCGATG AACAAGGGTC TAGTTGGGCC TACCAGTGTC TCCAATGTGG TTATGAAGTG
CACCCCAAAT GCGTCAGAAC AGTCGACCGT CAGAACAGTG TGTTAATAAC TAATTAA

>Vigan.02G024700.01
MRAVMKDETQ AVVNDNSHNG KFSHLLASQD RDYLLSPTGA QVKVSDLEGK VVGLLFGANW YPPCRVFTQA LVGIYEELKS
RFPQFEIVYV SSDEDLDAFS SFYGNMPWLA IPFSDLETKK WLTRKYEVEA IPCLILLQPE DSKDEGTVRD GVELIYRYGA
EAYPFCNERL EQLRKEDKVK RENQTLLNLL SNQHRDYVLS HTHSGLKQVP VASLVGKTIA LYFSAEWCVP CAKFTPKMIS
VYEKIKQELA EKGEEDFEVV LVSSDRDKAS FESHYSSMPW LALPFGDSEM KNLVRHFNVQ GIPWLVIVGP DGKTITVHGR
SLINLYQENA YPFTNAKVEE LEKKLEEEAK DLPALVYHEG HRHDLNLVSD GNGGGPFICC VCDEQGSSWA YQCLQCGYEV
HPKCVRTVDR QNSVLITN*