GBrowse Details

Vigan.02G036700.01

Basic Information:
Name: Vigan.02G036700.01
Multiple alignment
Variant Information
Position: Chr02:2709830..2717591 (+ strand)
Length: 7762
Functional Information:
Description: Similar to Glucose-6-phosphate isomerase. [V7ASE5, Phaseolus vulgaris]
GO: Biological Process: gluconeogenesis (GO:0006094)
Biological Process: glycolysis (GO:0006096)
Molecular Function: glucose-6-phosphate isomerase activity (GO:0004347)
InterPro: Phosphoglucose isomerase (PGI) (IPR001672)
Phosphoglucose isomerase, conserved site (IPR018189)
Phosphoglucose isomerase, C-terminal (IPR023096)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:33.02,51.39,22.01,33.17,35.22,63.34,42.90,25.31
Arabidopsis thaliana homolog: AT5G42740.1
Automatic updates:
Name: NM_001255099 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max glucose-6-phosphate isomerase, cytosolic-like (LOC100807719), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:2709830..2709999 (+ strand)
Length: 170
Type: five_prime_UTR
Position: Chr02:2710000..2710050 (+ strand)
Length: 51
Type: CDS
Position: Chr02:2710149..2710225 (+ strand)
Length: 77
Type: CDS
Position: Chr02:2710345..2710426 (+ strand)
Length: 82
Type: CDS
Position: Chr02:2710531..2710578 (+ strand)
Length: 48
Type: CDS
Position: Chr02:2710863..2711018 (+ strand)
Length: 156
Type: CDS
Position: Chr02:2711112..2711208 (+ strand)
Length: 97
Type: CDS
Position: Chr02:2711374..2711416 (+ strand)
Length: 43
Type: CDS
Position: Chr02:2711575..2711642 (+ strand)
Length: 68
Type: CDS
Position: Chr02:2711777..2711861 (+ strand)
Length: 85
Type: CDS
Position: Chr02:2712116..2712164 (+ strand)
Length: 49
Type: CDS
Position: Chr02:2712600..2712672 (+ strand)
Length: 73
Type: CDS
Position: Chr02:2712774..2712834 (+ strand)
Length: 61
Type: CDS
Position: Chr02:2713185..2713251 (+ strand)
Length: 67
Type: CDS
Position: Chr02:2713694..2713750 (+ strand)
Length: 57
Type: CDS
Position: Chr02:2713850..2713903 (+ strand)
Length: 54
Type: CDS
Position: Chr02:2713994..2714122 (+ strand)
Length: 129
Type: CDS
Position: Chr02:2714815..2714878 (+ strand)
Length: 64
Type: CDS
Position: Chr02:2714978..2715051 (+ strand)
Length: 74
Type: CDS
Position: Chr02:2715279..2715332 (+ strand)
Length: 54
Type: CDS
Position: Chr02:2715423..2715491 (+ strand)
Length: 69
Type: CDS
Position: Chr02:2716037..2716126 (+ strand)
Length: 90
Type: CDS
Position: Chr02:2716288..2716395 (+ strand)
Length: 108
Type: CDS
Position: Chr02:2717097..2717147 (+ strand)
Length: 51
Type: CDS
Position: Chr02:2717148..2717591 (+ strand)
Length: 444
Type: three_prime_UTR


>Vigan.02G036700.01
AAAAAATTGA AATAGCCTTT CTCTTCCCTT TTTGTTCGTC AACGTGTAAC ATTTAGCGCT CGCCATGTGA AAGAAACAAA
GTTAAGAAAG TTCCGACTTA CATACAACGC ACAAAGCGAG TCTCGAATTC ATTCATCACT CACACAGTCA CACTCTCCCT
CGTCGCGCTC ATGGCATCAT CCATTATCAT TTCCGATACT CAGCCATGGA AGGACCTGAA GGCGCATGTG GAGGACATCA
AGAAAACGCA TCTTCGCGAT CTGTTGACCG ATGATAAGCG GTGCCAGTCC ATGTTCCTTG AGTTCGATGA CATTCTGTTG
GACTATTCAA GGCAACAAGC CACTCCCGAA ACTATCCAAA AACTACTTAA ATTGGCGGAG GCTGCATCGC TCAAAGATAA
GATTAACCGC ATGTACAGCG GGGAACATAT TAACAGCACG GAAAACAGGT CCGTGCTTCA CGTCGCCCTT CGTGCTTCAA
GGGATGCTGT CATACAAAGT GATGGGAAAA ATGTTGTGCC AGAAGTTTGG AAAGTTCTTG ACAACATCCA GGAGTTCTCT
GAGCGGGTTC GCAATGGTTC TTGGGTTGGT GCTACAGGAA AGGCTTTGAA GGACGTTGTT GCAATTGGTA TTGGGGGAAG
CTTCTTGGGT CCGCTGTTTG TACACACTGC ACTTCAAACA GACCCTGATG CTATTGAATC TGCAAGGGGT CGTCAGCTGC
GCTTTCTTGC AAATGTGGAT CCCATTGACG TTGCTAGAAA TATCACAGGA TTAAATCCTG AAACAACACT TGTTGTGGTT
GTTTCAAAGA CTTTTACAAC AGCTGAAACC ATGCTGAATG CTCGAACTCT TAGAGAATGG ATATCATCTG CACTTGGGCC
CTCTGCTGTT GCAAAGCATA TGGTGGCTGT TAGCACAAAT CTCAAGCTTG TGGAACAGTT TGGTATTGAC CCTAACAATG
CTTTTGCGTT TTGGGATTGG GTCGGTGGGC GATACAGTGT TTGCAGTGCT GTTGGAGTTT TGCCATTGTC TTTACAATAC
GGTTTCTCAG TAATAGAGAA GTTCTTAAGT GGGGCTTCAA GCATTGATCA ACATTTCTAT TCACAGCCCT TTGAAAGTAA
TATACCTGTG CTTCTGGGTT TGTTGAGCAT ATGGAATGTT TCATTTCTTG GATATCCTGC CAGAGCCATC TTACCTTATA
GTCAAGCTCT GGAGAAGTTG GCCCCCCACA TTCAACAGGT TAGCATGGAG AGTAATGGCA AGGGTGTTTC AATTGATGGT
GTTCCTCTAC CATTTGAGGC TGGCGAAATT GATTTTGGTG AACCAGGAAC TAATGGGCAG CATAGCTTTT ATCAGCTCAT
ACATCAGGGG CGTGTAATTC CTTGTGATTT TATTGGAGTT GTAAAAAGTC AGCAACCTGT CTTTCTGAAA GGTGAAGTAG
TGAGTAACCA TGATGAGCTC ATGTCCAACT ATTTTGCACA ACCTGATGCC CTTGCATATG GAAAGACAGC AGACCAGCTG
CAAAAGGAGA ATGTTTCCCC ACACCTTATT CCTCACAAGA CATTCAGCGG TAACCGACCT TCTCTCAGCC TACTGCTTCC
ATCATTGAAT GCTTACAATA TTGGGCAGTT GTTGGCAATC TATGAACACA GAATTGCTGT AGAGGGTTTC ATTTGGGGAA
TCAATTCTTT TGATCAGTGG GGAGTAGAGC TGGGGAAGTC ACTGGCTACT CAAGTCAGAA AACAACTTAA TGCATCTCGA
ACAAAACAAG AACCAGTTCA AGGTTTTAAT TTCAGTACAA CAACAATGTT GAATAGATAT CTTCAGGCAA GTTTAGACAT
CCCAGCGGAT CTGCCAACTT CTTTACCGAA GATCTAATAG CCTTTTTGCC AATAGTTGTG TTCATAATGA ATAATAAGAA
AATAATCTGG TGAATGTTAT ATATACAGCA CGCCTACGAA CATGTTTTTA TATCCGTATC GATTTTAACT AGTTTAGCAC
GATACGTGGT TATCCTATTC CCTTGCTGTC GAATTATCTT CTGCTGGAAA GTGAAAAGCA TTTTGGATTC TAAATTTTGT
TTGGAGCTTG CCAACTGACA TGTTGTGATA TCCTCGCTGT TTCTTTTTTC TTAAATTGTT TAGACGATAC AAGATCTTTT
CTGCTGGAGT TGTGTTATAC TGAAAAGTGA AAAATGTTTT GGGTTCTAAT TTTTCTTTTG GAGTGTTTTT GACTTGCTGT
ACACACAGCC TAAGGTATTT TGAGCTCAAA AGTCAAGATG AGCATGCTTT ATCATTATTC TATTCTAATG CTATATACAC
A

>Vigan.02G036700.01
ATGGCATCAT CCATTATCAT TTCCGATACT CAGCCATGGA AGGACCTGAA GGCGCATGTG GAGGACATCA AGAAAACGCA
TCTTCGCGAT CTGTTGACCG ATGATAAGCG GTGCCAGTCC ATGTTCCTTG AGTTCGATGA CATTCTGTTG GACTATTCAA
GGCAACAAGC CACTCCCGAA ACTATCCAAA AACTACTTAA ATTGGCGGAG GCTGCATCGC TCAAAGATAA GATTAACCGC
ATGTACAGCG GGGAACATAT TAACAGCACG GAAAACAGGT CCGTGCTTCA CGTCGCCCTT CGTGCTTCAA GGGATGCTGT
CATACAAAGT GATGGGAAAA ATGTTGTGCC AGAAGTTTGG AAAGTTCTTG ACAACATCCA GGAGTTCTCT GAGCGGGTTC
GCAATGGTTC TTGGGTTGGT GCTACAGGAA AGGCTTTGAA GGACGTTGTT GCAATTGGTA TTGGGGGAAG CTTCTTGGGT
CCGCTGTTTG TACACACTGC ACTTCAAACA GACCCTGATG CTATTGAATC TGCAAGGGGT CGTCAGCTGC GCTTTCTTGC
AAATGTGGAT CCCATTGACG TTGCTAGAAA TATCACAGGA TTAAATCCTG AAACAACACT TGTTGTGGTT GTTTCAAAGA
CTTTTACAAC AGCTGAAACC ATGCTGAATG CTCGAACTCT TAGAGAATGG ATATCATCTG CACTTGGGCC CTCTGCTGTT
GCAAAGCATA TGGTGGCTGT TAGCACAAAT CTCAAGCTTG TGGAACAGTT TGGTATTGAC CCTAACAATG CTTTTGCGTT
TTGGGATTGG GTCGGTGGGC GATACAGTGT TTGCAGTGCT GTTGGAGTTT TGCCATTGTC TTTACAATAC GGTTTCTCAG
TAATAGAGAA GTTCTTAAGT GGGGCTTCAA GCATTGATCA ACATTTCTAT TCACAGCCCT TTGAAAGTAA TATACCTGTG
CTTCTGGGTT TGTTGAGCAT ATGGAATGTT TCATTTCTTG GATATCCTGC CAGAGCCATC TTACCTTATA GTCAAGCTCT
GGAGAAGTTG GCCCCCCACA TTCAACAGGT TAGCATGGAG AGTAATGGCA AGGGTGTTTC AATTGATGGT GTTCCTCTAC
CATTTGAGGC TGGCGAAATT GATTTTGGTG AACCAGGAAC TAATGGGCAG CATAGCTTTT ATCAGCTCAT ACATCAGGGG
CGTGTAATTC CTTGTGATTT TATTGGAGTT GTAAAAAGTC AGCAACCTGT CTTTCTGAAA GGTGAAGTAG TGAGTAACCA
TGATGAGCTC ATGTCCAACT ATTTTGCACA ACCTGATGCC CTTGCATATG GAAAGACAGC AGACCAGCTG CAAAAGGAGA
ATGTTTCCCC ACACCTTATT CCTCACAAGA CATTCAGCGG TAACCGACCT TCTCTCAGCC TACTGCTTCC ATCATTGAAT
GCTTACAATA TTGGGCAGTT GTTGGCAATC TATGAACACA GAATTGCTGT AGAGGGTTTC ATTTGGGGAA TCAATTCTTT
TGATCAGTGG GGAGTAGAGC TGGGGAAGTC ACTGGCTACT CAAGTCAGAA AACAACTTAA TGCATCTCGA ACAAAACAAG
AACCAGTTCA AGGTTTTAAT TTCAGTACAA CAACAATGTT GAATAGATAT CTTCAGGCAA GTTTAGACAT CCCAGCGGAT
CTGCCAACTT CTTTACCGAA GATCTAA

>Vigan.02G036700.01
MASSIIISDT QPWKDLKAHV EDIKKTHLRD LLTDDKRCQS MFLEFDDILL DYSRQQATPE TIQKLLKLAE AASLKDKINR
MYSGEHINST ENRSVLHVAL RASRDAVIQS DGKNVVPEVW KVLDNIQEFS ERVRNGSWVG ATGKALKDVV AIGIGGSFLG
PLFVHTALQT DPDAIESARG RQLRFLANVD PIDVARNITG LNPETTLVVV VSKTFTTAET MLNARTLREW ISSALGPSAV
AKHMVAVSTN LKLVEQFGID PNNAFAFWDW VGGRYSVCSA VGVLPLSLQY GFSVIEKFLS GASSIDQHFY SQPFESNIPV
LLGLLSIWNV SFLGYPARAI LPYSQALEKL APHIQQVSME SNGKGVSIDG VPLPFEAGEI DFGEPGTNGQ HSFYQLIHQG
RVIPCDFIGV VKSQQPVFLK GEVVSNHDEL MSNYFAQPDA LAYGKTADQL QKENVSPHLI PHKTFSGNRP SLSLLLPSLN
AYNIGQLLAI YEHRIAVEGF IWGINSFDQW GVELGKSLAT QVRKQLNASR TKQEPVQGFN FSTTTMLNRY LQASLDIPAD
LPTSLPKI*