VIGGS:GBrowse

Vigan.02G047500.01

Basic Information:

Name:	Vigan.02G047500.01 Multiple alignment Variant Information
Position:	Chr02:3549692..3561596 (+ strand)
Length:	11905

Functional Information:

Description:	Hypothetical protein.
Expression level (FPKM):	Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,0.00,0.00,0.00,0.00,0.00,0.00

Automatic updates:

Name:	NM_001255731 NCBI(nuccore)
Organism:	Glycine max
Description:	Glycine max cysteine proteinase RD21a-like (LOC100807362), mRNA.
PubMed ID:	-
Status:	Known Variant

Structure :

[show][hide]Parts:

Position:	Chr02:3549692..3549729 (+ strand)
Length:	38
Type:	CDS

Position:	Chr02:3555907..3556036 (+ strand)
Length:	130
Type:	CDS

Position:	Chr02:3561426..3561596 (+ strand)
Length:	171
Type:	CDS

[hide all][show all]SEQUENCES

[show][hide][copy]EXON + INTRON

[show][hide][copy]TRANSCRIPT

>Vigan.02G047500.01
ATGTCTGACC ACATAGGTCA GACATCACGT GAAAATAGGC CTCATAGGCG CTCGACCATC AGGCCTCACA GGAGTTCTAC
CATCCGGCCT CACAGGCACT CGGCCATCAG GCCTCACAAG CGTTCTGCCA TCCGGCCTCA CAGGCGCTCG ATCCCGTTGG
CTTCACGGGG CTCAAATACC AATTGTCGCA CAGAGCAGCT TGACGTTGAG TTGCTGACTT CAATTATCAC TCCCTTCTTC
ACTCTCCTTT TCAACACAGC CCCACGAGAT GGAACACCAC ACTTCAAACC ATGCCTTACC ATCTCCATCA TCTCCCCACC
ACGCTATTCT CATCTCTAA

[show][hide][copy]CDS

>Vigan.02G047500.01
ATGTCTGACC ACATAGGTCA GACATCACGT GAAAATAGGC CTCATAGGCG CTCGACCATC AGGCCTCACA GGAGTTCTAC
CATCCGGCCT CACAGGCACT CGGCCATCAG GCCTCACAAG CGTTCTGCCA TCCGGCCTCA CAGGCGCTCG ATCCCGTTGG
CTTCACGGGG CTCAAATACC AATTGTCGCA CAGAGCAGCT TGACGTTGAG TTGCTGACTT CAATTATCAC TCCCTTCTTC
ACTCTCCTTT TCAACACAGC CCCACGAGAT GGAACACCAC ACTTCAAACC ATGCCTTACC ATCTCCATCA TCTCCCCACC
ACGCTATTCT CATCTCTAA

[show][hide][copy]PROTEIN

>Vigan.02G047500.01
MSDHIGQTSR ENRPHRRSTI RPHRSSTIRP HRHSAIRPHK RSAIRPHRRS IPLASRGSNT NCRTEQLDVE LLTSIITPFF
TLLFNTAPRD GTPHFKPCLT ISIISPPRYS HL*