GBrowse Details

Vigan.02G048200.01

Basic Information:
Name: Vigan.02G048200.01
Multiple alignment
Variant Information
Position: Chr02:3611750..3613924 (+ strand)
Length: 2175
Functional Information:
Description: Similar to L-asparaginase 2. [Q2PW34, Phaseolus vulgaris]
GO: Molecular Function: hydrolase activity (GO:0016787)
InterPro: Peptidase T2, asparaginase 2 (IPR000246)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.70,0.42,9.60,0.02,0.09,6.06,0.05,0.44
Arabidopsis thaliana homolog: AT3G16150.1
Automatic updates:
Name: NM_001289309 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max probable isoaspartyl peptidase/L-asparaginase 2-like (LOC100812187), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:3611750..3612085 (+ strand)
Length: 336
Type: five_prime_UTR
Position: Chr02:3612086..3612247 (+ strand)
Length: 162
Type: CDS
Position: Chr02:3612760..3612993 (+ strand)
Length: 234
Type: CDS
Position: Chr02:3613168..3613254 (+ strand)
Length: 87
Type: CDS
Position: Chr02:3613329..3613826 (+ strand)
Length: 498
Type: CDS
Position: Chr02:3613827..3613924 (+ strand)
Length: 98
Type: three_prime_UTR


>Vigan.02G048200.01
CCAATAGTGA GAGGAAAACA GGGACAGAAG AGAGCAGCGT TGGACACCGA AGTCTGACTA ATTCTGCACA AACTGGGGAA
AGGGCAAGTT CGGAATACGC ACCCTTCCTT CGTAGTTGAT AAGGAATCCG AGTTGTCCAA GTCAGGGACA ACAACTCTCA
TGCATCCGAA ACGACCGCGT ACCACTTTCC CTCCCTCAAC CCTAACCCAG ATTTAACTAC ACCAGATAAT CACTTTCAAG
TCCGAATTTC CCTATAAAAC CACCAACCAA CTTCTACCCC AAACACAACA CAAAACGATA AACAACTGCA TACATAGAAT
AAAGAGAAAT AATATCATGG GGGGCTGGGC AATAGCGGTG CATGGTGGCG CAGGCGTGGA TCCTAATCTC CCACCGCACC
GTCAGGAGCA AGCCAAACAA CTCCTTACTC GCTGTCTTAA TCTTGGCATC TCTGCCCTTC GTTCCAATGC TTCCGCCGTC
GACGTTGTCG AACTTGTCGT ACGGGAACTG GAAACGGATC CCCTGTTTAA CTCGGGTCGA GGATCCGCCC TGACAGAAAA
GGGAACAGTG GAAATGGAGG CAAGTATCAT GGACGGTTCC AAGAGACGAT GCGGCGCCGT TTCGGGCCTC ACCACCGTCA
AAAACCCCGT CTCACTCGCT CGCCTTGTCA TGGACAAGTC TCCACATTCC TACCTCGCCT TTAACGGCGC TGAAGAATTC
GCCAGACAAC AGGGTGTGGA GGTAGTGGAG AACGAATACT TCATTACTCC TGAAAATGTC GGAATGCTGA AACTGGCAAA
GGAGGCAAAC ACAATCCTGT TTGATTATCG GATTCCAACG GCTGGATACG ATAGTTGCGG TGTGGGGGCC GAGAGTCCGT
TGCAGATGAA TGGACTGCCA ATAAGCGTGT ACGCGCCGGA GACGGTGGGG TGTGTGGTGG TGGACAAGGA GGGGAGGTGT
GCGGCTGCGA CGTCGACAGG AGGTTTGATG AACAAGAAGA GTGGAAGAAT CGGTGACTCG CCTCTGATAG GTGCAGGGAC
TTACGCTTGT GGAGTGTGTG GGGTTTCGTG CACTGGGGAA GGTGAAGCTA TCATACGAGG CACGCTGGCG CGTGAGGTGG
CTGCAGTGAT GGAATACAAA GGACTGCCAC TGCAGCAGGC TGTGGACTTT GTGATCAAGC ACCGCCTGGA CGAAGGGAAA
GCAGGGCTGA TCGCCGTCTC AAATACCGGT GACGTCGCTT ATGGCTTCAA CTGTAACGCC ATGTTCAGGG GCTGCGCCAC
CGAGGACGGA TTCATGGAGG TCGGAATCTG GGACTAGAAA ATACTAAGAA AATAAAACGT TTTTTTTTTC TTCATTTTGG
TTTGGTTCTG CACTTTTTAT TTATTTTTTA TTTTTAAATC AATGTTGGGG TTCTA

>Vigan.02G048200.01
ATGGGGGGCT GGGCAATAGC GGTGCATGGT GGCGCAGGCG TGGATCCTAA TCTCCCACCG CACCGTCAGG AGCAAGCCAA
ACAACTCCTT ACTCGCTGTC TTAATCTTGG CATCTCTGCC CTTCGTTCCA ATGCTTCCGC CGTCGACGTT GTCGAACTTG
TCGTACGGGA ACTGGAAACG GATCCCCTGT TTAACTCGGG TCGAGGATCC GCCCTGACAG AAAAGGGAAC AGTGGAAATG
GAGGCAAGTA TCATGGACGG TTCCAAGAGA CGATGCGGCG CCGTTTCGGG CCTCACCACC GTCAAAAACC CCGTCTCACT
CGCTCGCCTT GTCATGGACA AGTCTCCACA TTCCTACCTC GCCTTTAACG GCGCTGAAGA ATTCGCCAGA CAACAGGGTG
TGGAGGTAGT GGAGAACGAA TACTTCATTA CTCCTGAAAA TGTCGGAATG CTGAAACTGG CAAAGGAGGC AAACACAATC
CTGTTTGATT ATCGGATTCC AACGGCTGGA TACGATAGTT GCGGTGTGGG GGCCGAGAGT CCGTTGCAGA TGAATGGACT
GCCAATAAGC GTGTACGCGC CGGAGACGGT GGGGTGTGTG GTGGTGGACA AGGAGGGGAG GTGTGCGGCT GCGACGTCGA
CAGGAGGTTT GATGAACAAG AAGAGTGGAA GAATCGGTGA CTCGCCTCTG ATAGGTGCAG GGACTTACGC TTGTGGAGTG
TGTGGGGTTT CGTGCACTGG GGAAGGTGAA GCTATCATAC GAGGCACGCT GGCGCGTGAG GTGGCTGCAG TGATGGAATA
CAAAGGACTG CCACTGCAGC AGGCTGTGGA CTTTGTGATC AAGCACCGCC TGGACGAAGG GAAAGCAGGG CTGATCGCCG
TCTCAAATAC CGGTGACGTC GCTTATGGCT TCAACTGTAA CGCCATGTTC AGGGGCTGCG CCACCGAGGA CGGATTCATG
GAGGTCGGAA TCTGGGACTA G

>Vigan.02G048200.01
MGGWAIAVHG GAGVDPNLPP HRQEQAKQLL TRCLNLGISA LRSNASAVDV VELVVRELET DPLFNSGRGS ALTEKGTVEM
EASIMDGSKR RCGAVSGLTT VKNPVSLARL VMDKSPHSYL AFNGAEEFAR QQGVEVVENE YFITPENVGM LKLAKEANTI
LFDYRIPTAG YDSCGVGAES PLQMNGLPIS VYAPETVGCV VVDKEGRCAA ATSTGGLMNK KSGRIGDSPL IGAGTYACGV
CGVSCTGEGE AIIRGTLARE VAAVMEYKGL PLQQAVDFVI KHRLDEGKAG LIAVSNTGDV AYGFNCNAMF RGCATEDGFM
EVGIWD*