GBrowse Details

Vigan.02G093200.01

Basic Information:
Name: Vigan.02G093200.01
Multiple alignment
Variant Information
Position: Chr02:7439509..7442305 (+ strand)
Length: 2797
Functional Information:
Description: Similar to Uncharacterized protein. [I3SSR9, Medicago truncatula]
InterPro: AIG2-like (IPR009288)
Butirosin biosynthesis, BtrG-like (IPR013024)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.35,1.40,18.60,52.96,30.82,15.11,12.56,16.85
Arabidopsis thaliana homolog: AT2G24390.1
Automatic updates:
Name: NM_001250311 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527521 (LOC100527521), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001254496 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max protein AIG2-like (LOC100794072), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:7439509..7439608 (+ strand)
Length: 100
Type: five_prime_UTR
Position: Chr02:7439609..7439742 (+ strand)
Length: 134
Type: CDS
Position: Chr02:7439890..7439962 (+ strand)
Length: 73
Type: CDS
Position: Chr02:7440551..7440643 (+ strand)
Length: 93
Type: CDS
Position: Chr02:7440797..7440880 (+ strand)
Length: 84
Type: CDS
Position: Chr02:7441933..7442076 (+ strand)
Length: 144
Type: CDS
Position: Chr02:7442077..7442305 (+ strand)
Length: 229
Type: three_prime_UTR


>Vigan.02G093200.01
AAAAAACCGT TATCAACAAT CATACAGATG AGAAGATAGT TTTGGAAATA AAAGAGGGAG TAGTAGTAGA GAAGAGAGTG
AAGAGGAAGA AGAGAAAAAA ATGAGCGTAA ATGTGAATTG CGTGGGTGGC GTTACGCACA ACGTCTTCGT CTATGGTAGC
CTTCTGGCCG ATGAGGTTGT CCATACCCTC TTGAAGCGCC TTCCTCCGAC CACACCTGCC ATCCTTCACG ACCATCACAG
ATTTAAGATC AAAGGTCGCG TTTATCCCGC TGTTCTCCCC GTCCACAATG ACAAAGTTAA TGGCAGGGTG CTTCTTGGTT
TATCGGGAGT TGAACTGCAT ATTTTAGATG AGTTCGAGGA TGATGAATAT ACTAGAACTG ATGTTGAGGT TTTCTTGGAG
GACAAGTCTG AAAAGATGCA AGTTTACGCA TATGTTTGGG GCAATAGAAA TGACCCCAAC TTATATTCAG AGTGGGACTT
TGAGGAATGG AAACAAATTC ACATGAATGA TTTCGTTAAG ATGACCAATA GCTTTATGGA AGAATTGGAA TCGCCAGAAT
CCAAGCCAAG GGTGCAGACT TATGAAGCCT TCTACAAGGA AGAAAAGGAT AAGCCACTTC AACCTTGATG TTTACAGTTT
GTAAAATTAT GCATTTTGTG CACTGAGCTG AGCTGTATGG TTCAATTAAG AATCATACTG TTCACTGTTA ATAATTGTAA
GTTCCTTTCC GAATCATATT TTGATAACCA AACAATGACA AGTTTATGCT ATATTGTATC ATTATTATCT TCTAGGATTC
AATAGAAATA TTTTATCACC CTTTCTCCAA AATAGATGTC CATATATACA TACATAG

>Vigan.02G093200.01
ATGAGCGTAA ATGTGAATTG CGTGGGTGGC GTTACGCACA ACGTCTTCGT CTATGGTAGC CTTCTGGCCG ATGAGGTTGT
CCATACCCTC TTGAAGCGCC TTCCTCCGAC CACACCTGCC ATCCTTCACG ACCATCACAG ATTTAAGATC AAAGGTCGCG
TTTATCCCGC TGTTCTCCCC GTCCACAATG ACAAAGTTAA TGGCAGGGTG CTTCTTGGTT TATCGGGAGT TGAACTGCAT
ATTTTAGATG AGTTCGAGGA TGATGAATAT ACTAGAACTG ATGTTGAGGT TTTCTTGGAG GACAAGTCTG AAAAGATGCA
AGTTTACGCA TATGTTTGGG GCAATAGAAA TGACCCCAAC TTATATTCAG AGTGGGACTT TGAGGAATGG AAACAAATTC
ACATGAATGA TTTCGTTAAG ATGACCAATA GCTTTATGGA AGAATTGGAA TCGCCAGAAT CCAAGCCAAG GGTGCAGACT
TATGAAGCCT TCTACAAGGA AGAAAAGGAT AAGCCACTTC AACCTTGA

>Vigan.02G093200.01
MSVNVNCVGG VTHNVFVYGS LLADEVVHTL LKRLPPTTPA ILHDHHRFKI KGRVYPAVLP VHNDKVNGRV LLGLSGVELH
ILDEFEDDEY TRTDVEVFLE DKSEKMQVYA YVWGNRNDPN LYSEWDFEEW KQIHMNDFVK MTNSFMEELE SPESKPRVQT
YEAFYKEEKD KPLQP*