GBrowse Details

Vigan.02G097100.01

Basic Information:
Name: Vigan.02G097100.01
Multiple alignment
Variant Information
Position: Chr02:7865922..7869553 (+ strand)
Length: 3632
Functional Information:
Description: Similar to Uncharacterized protein. [M5XSS0, Prunus persica]
InterPro: Domain of unknown function DUF814 (IPR008532)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:46.83,26.21,26.77,30.28,31.34,24.42,21.41,34.00
Arabidopsis thaliana homolog: AT5G11500.1
Automatic updates:
Name: NM_001254287 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max coiled-coil domain-containing protein 25-like (LOC100802228), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001255281 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100785488 (LOC100785488), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:7865922..7866234 (+ strand)
Length: 313
Type: five_prime_UTR
Position: Chr02:7866235..7866347 (+ strand)
Length: 113
Type: CDS
Position: Chr02:7866902..7867029 (+ strand)
Length: 128
Type: CDS
Position: Chr02:7867458..7867561 (+ strand)
Length: 104
Type: CDS
Position: Chr02:7867703..7867790 (+ strand)
Length: 88
Type: CDS
Position: Chr02:7868015..7868076 (+ strand)
Length: 62
Type: CDS
Position: Chr02:7868737..7868889 (+ strand)
Length: 153
Type: CDS
Position: Chr02:7868890..7869553 (+ strand)
Length: 664
Type: three_prime_UTR


>Vigan.02G097100.01
TTTTCCTCTT GTATATAATT TTTGTCTCTG TTATTTGGGT GAAATTTGTT ACCACAGTTG AAGTTTATTA GAATCTGGAA
ATTTCGTGGC AGAATTGTAT TTTGTTGTAC CCACCACAAC ACAACGGCGC ATTTGGCTCT AGTAAAAGAA GAAAGGTTCG
GTGTGTTTAT GATTGACGCG GCGATTCGTG TAACGAAAGC AATTCCCCAA TTTTGATTTG TTTTGAGGAA AAGAACAGTT
CCCATTCAGA ACCCTAATCT AACCGCATAC GCTTTCTTCA ACGTCTGCGT CGAAACAACG CCACACACGC ACGATGGTGT
TCTACTTCAA GGCGCGTCCT GAAGCCGGCG ACTACACTAT CTTCATGGGT CTCGACAAGT TCGAAAACGA GGAGCTCATC
AAATACGGTT TTCCCGAAGA TATTTGGTTT CATGTTGATA AAATGTCTTC AGCCCATGTC TATGTAAGAC TGCACAAAGG
CCAGACTATT GATGGCATGA GTGAAGGTTT ACTGGAAGAC TGTGCTCAGC TTGTCAAAGC AAATTCAATT CAAGGGAATA
AAGTGAACAA TGTTGATGTT GTTTACACTC CATGGTCTAA TTTAAAGAAA ACTGCTTCAA TGGATGTTGG TCAAGTTGGT
TTTCACAATT CAAAAATGGT TCGAACAGTG AGAGTTGAGA AGAGGATAAA TGAGATTGTT AACAGGCTAA ACAAGACAAA
AGTGGAAAGG AAACCTGATT TGAAAGCTGA GAGAGAAGCG GTTAATGCAG CTGAACGAGC TGAGAGAAAA CAACAATTAA
GAGAAAAGAA ACGCCGTGAG GAATTGGAAA GACTCGACAA GGAGAGACAA GCAGAGCTTC GAAGCTACAA GGGTTTGATG
GTTGCTGAAA ATATGACATC AAACAAACAA ATTGCATCTG GAAGCAAATC ATTGCAGGAA CTGGAGGAGG ATTTCATGTA
AGCATTTGAT TATGGGGTTT TAGGAAGATG AGTGGCGATC AACTTGCAAT CTGGCAGATC TATATATTGA TTACTTCTGG
AATATGAAGC TGCATTATGT TATCTTTCTT GAGGAAACCA AGTAATGTGT TTACCCAACT GTGATCAGAT AGAGAAAAAG
ACGGGGGTGG GGGAAAGGGA ATGATTGGAC TATGTTCTTC GCAAAGGCAA TATACCTTAC TTATCTATAA CCTTGCTTGA
GACAATGGTT TTAATATTAT TGTTCTCACA GTCTAGTCAA AAACTGAAAT ATTTCTTGCT ATATTTAGTG GCAGTTTATG
CTTGGCTGGT TTAGAATTTA GTTTTCCCTT TTTAATTTTA TTTTCCCCGC TTGAGAAATT GTTGCAAAAT GATCTCCGGT
GTTGATGGTA CGGACAGAAA AGCCTTTTAT TGTTGTTGAT ATCAAAACTA ATAGAACACC AGTTTAGCTT GAGACCCTAC
CCAGTAAGGT TTGTTTACAA GGGGTACTAG CACTGGTATA TGAATGTTTG TATGTTGCCC ATGAAATCTT GTAACAGAAC
ATCATAATTT GTTCGTCTGC ACATTCGTTT CTAACTTGAT GATAAGGTAA TCATAGTCGA CTATAGCTAT ATTATAGCTG
TATTTACACT TTCATAAGAT AAGGG

>Vigan.02G097100.01
ATGGTGTTCT ACTTCAAGGC GCGTCCTGAA GCCGGCGACT ACACTATCTT CATGGGTCTC GACAAGTTCG AAAACGAGGA
GCTCATCAAA TACGGTTTTC CCGAAGATAT TTGGTTTCAT GTTGATAAAA TGTCTTCAGC CCATGTCTAT GTAAGACTGC
ACAAAGGCCA GACTATTGAT GGCATGAGTG AAGGTTTACT GGAAGACTGT GCTCAGCTTG TCAAAGCAAA TTCAATTCAA
GGGAATAAAG TGAACAATGT TGATGTTGTT TACACTCCAT GGTCTAATTT AAAGAAAACT GCTTCAATGG ATGTTGGTCA
AGTTGGTTTT CACAATTCAA AAATGGTTCG AACAGTGAGA GTTGAGAAGA GGATAAATGA GATTGTTAAC AGGCTAAACA
AGACAAAAGT GGAAAGGAAA CCTGATTTGA AAGCTGAGAG AGAAGCGGTT AATGCAGCTG AACGAGCTGA GAGAAAACAA
CAATTAAGAG AAAAGAAACG CCGTGAGGAA TTGGAAAGAC TCGACAAGGA GAGACAAGCA GAGCTTCGAA GCTACAAGGG
TTTGATGGTT GCTGAAAATA TGACATCAAA CAAACAAATT GCATCTGGAA GCAAATCATT GCAGGAACTG GAGGAGGATT
TCATGTAA

>Vigan.02G097100.01
MVFYFKARPE AGDYTIFMGL DKFENEELIK YGFPEDIWFH VDKMSSAHVY VRLHKGQTID GMSEGLLEDC AQLVKANSIQ
GNKVNNVDVV YTPWSNLKKT ASMDVGQVGF HNSKMVRTVR VEKRINEIVN RLNKTKVERK PDLKAEREAV NAAERAERKQ
QLREKKRREE LERLDKERQA ELRSYKGLMV AENMTSNKQI ASGSKSLQEL EEDFM*