GBrowse Details

Vigan.02G109500.01

Basic Information:
Name: Vigan.02G109500.01
Multiple alignment
Variant Information
Position: Chr02:9092058..9098609 (+ strand)
Length: 6552
Functional Information:
Description: Similar to XIAP-associated factor 1-like isoform X2. [XP_004501054.1, Cicer arietinum]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:7.86,6.95,13.48,10.00,17.98,11.96,19.53,12.27
Automatic updates:
Name: NM_001251597 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306673 (LOC100306673), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:9092058..9092374 (+ strand)
Length: 317
Type: five_prime_UTR
Position: Chr02:9092375..9092418 (+ strand)
Length: 44
Type: CDS
Position: Chr02:9092785..9092920 (+ strand)
Length: 136
Type: CDS
Position: Chr02:9094505..9094642 (+ strand)
Length: 138
Type: CDS
Position: Chr02:9094730..9094851 (+ strand)
Length: 122
Type: CDS
Position: Chr02:9098066..9098225 (+ strand)
Length: 160
Type: CDS
Position: Chr02:9098226..9098609 (+ strand)
Length: 384
Type: three_prime_UTR


>Vigan.02G109500.01
ATGGCAGCTA CTTTCTCAGT CATCATCTAT TTTAATGGCC GATGGTTCCG AAAAGTCTCC CCAAATAAGA GTGGTTCAAC
AAGAGCAATT CTCCATTTTG TTTATTTTGC CCAAATTTTC CTTAATAATA ACCTAACCCT CTTCTTCCTT CCGCCCTATT
CTATATCTCT ACTTTTGTAA TCTCTCTCCC TCACATGTAT TTAATTTAAT TTGGTTTCTA TTTTTGTTTT CTTGTTTCTT
ATACTTATTA AATGTCTTTC CTTTTTAATT CCTTCGTTAA GATCTGGTCC TAGAACGAGG TTGCTTGTTT CGACGACATG
GCAGCGGTGT CCGATCAGAC CACTAGTATA TGCACTCACT GTGATCGGGC TATCCCTTCT GCAAATATTG ATTTGCATTA
TGCTCATTGC TCTCGGAACC TTGAAAGATG CAAAATTTGT TGCGATATGG TTCCGAAAAC GCTTGCCGAG GAGCACTATT
TGAACACACA TGCCCCGGTT GCCTGTTCGC TGTGCAGTGA AACTATGGAA CGTGATATTT TAGATATTCA TAGAGATGAA
AATTGTCCTA GAAGGATGGT CACCTGTGAG TTCTGTGAGT TTCCCTTGCC AGCCATTGAT CTGGTTGAGC ATCAGGAAGT
ATGCGGGAAT CGAACAGAAC TTTGTCACCT TTGTAACAAG TATGTTAGAC TGCGTGAAAG ATACAACCAT GAAGATAGTT
GCAACAGAAT TCAAGAGAAT TCTTCAAGGC CTTCAAGGTA CGTGAGACCA GTTGAAAGAG ACGAAGGTCC TCGAAGAAGG
CCGCAGAATG ATTTCCCAAG AAAGCGTGTT TTTTTCACAA TAGCAATCAC CGGTATTGCT GTTATTCTCG GGTCTATTTT
TTTCCAGAGA AAGACAGATC TCAGCAATTT GCAATAACAG GGGAGAGAAT ACGTGTTACT GTAAATTTGC TTGATCTGTA
TAATTTATTT GCATATAACA GAAGCTCGAA TGAGATAATT ATGGGATATC CTTCACCTGC TGATAAAACA GATTGTCATT
GTCATTGAAT TATTATTGTG GTATTCTATT TGATAGTGAA AACTGCCAAG TAGCAAGAGA TAAATGAGTC ATTCGTTACC
AATATTGCTA TTTGTTTGTT ATTCGTCTGT TATCTGAGAA CTGCAATATC GTTTCTGGAT AAAATTTGTG GATTTTTTGT
TTGGTTTTGT GAGACATTTG GGATTTGTGA TTCTGTGTGA CCACTCAAGT TACTTTTAAT AAATTTTAGC TAATATTAAG
CAAATTTTGA TATATAATAA C

>Vigan.02G109500.01
ATGGCAGCGG TGTCCGATCA GACCACTAGT ATATGCACTC ACTGTGATCG GGCTATCCCT TCTGCAAATA TTGATTTGCA
TTATGCTCAT TGCTCTCGGA ACCTTGAAAG ATGCAAAATT TGTTGCGATA TGGTTCCGAA AACGCTTGCC GAGGAGCACT
ATTTGAACAC ACATGCCCCG GTTGCCTGTT CGCTGTGCAG TGAAACTATG GAACGTGATA TTTTAGATAT TCATAGAGAT
GAAAATTGTC CTAGAAGGAT GGTCACCTGT GAGTTCTGTG AGTTTCCCTT GCCAGCCATT GATCTGGTTG AGCATCAGGA
AGTATGCGGG AATCGAACAG AACTTTGTCA CCTTTGTAAC AAGTATGTTA GACTGCGTGA AAGATACAAC CATGAAGATA
GTTGCAACAG AATTCAAGAG AATTCTTCAA GGCCTTCAAG GTACGTGAGA CCAGTTGAAA GAGACGAAGG TCCTCGAAGA
AGGCCGCAGA ATGATTTCCC AAGAAAGCGT GTTTTTTTCA CAATAGCAAT CACCGGTATT GCTGTTATTC TCGGGTCTAT
TTTTTTCCAG AGAAAGACAG ATCTCAGCAA TTTGCAATAA 

>Vigan.02G109500.01
MAAVSDQTTS ICTHCDRAIP SANIDLHYAH CSRNLERCKI CCDMVPKTLA EEHYLNTHAP VACSLCSETM ERDILDIHRD
ENCPRRMVTC EFCEFPLPAI DLVEHQEVCG NRTELCHLCN KYVRLRERYN HEDSCNRIQE NSSRPSRYVR PVERDEGPRR
RPQNDFPRKR VFFTIAITGI AVILGSIFFQ RKTDLSNLQ*