GBrowse Details

Vigan.02G112700.01

Basic Information:
Name: Vigan.02G112700.01
Multiple alignment
Variant Information
Position: Chr02:9437329..9443379 (+ strand)
Length: 6051
Functional Information:
Description: Similar to Uncharacterized protein. [I1K6C1, Glycine max]
GO: Biological Process: ATP hydrolysis coupled proton transport (GO:0015991)
Cellular Component: proton-transporting two-sector ATPase complex, catalytic domain (GO:0033178)
Molecular Function: proton-transporting ATPase activity, rotational mechanism (GO:0046961)
InterPro: ATPase, V1/A1 complex, subunit E (IPR002842)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:14.63,9.04,27.39,22.26,31.63,42.26,33.05,31.33
Automatic updates:
Name: NM_001354134 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max V-type proton ATPase subunit E (LOC100499818), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:9437329..9437470 (+ strand)
Length: 142
Type: five_prime_UTR
Position: Chr02:9437471..9437572 (+ strand)
Length: 102
Type: CDS
Position: Chr02:9437654..9437754 (+ strand)
Length: 101
Type: CDS
Position: Chr02:9438514..9438694 (+ strand)
Length: 181
Type: CDS
Position: Chr02:9439737..9439933 (+ strand)
Length: 197
Type: CDS
Position: Chr02:9440204..9440303 (+ strand)
Length: 100
Type: CDS
Position: Chr02:9442139..9442174 (+ strand)
Length: 36
Type: CDS
Position: Chr02:9442175..9443379 (+ strand)
Length: 1205
Type: three_prime_UTR


>Vigan.02G112700.01
ATTTTACACG CGTAAACCAG AATGTGTAAT TTTAAGATGT TAGCATAAAT GTGCTCAAAT AAGAGTGTGC TGGAGTGAGT
TGTTACAGTG GGGCAAGATA TCAAGTTCCA TCTCAGAGAA AGTTTGTAGT GACTCTCCGA AAATGAACGA CGCAGATGTC
TCTAAGCAAA TCCAGCAGAT GGTGCGGTTC ATCCGCCAGG AAGCAGAGGA AAAAGCTAAC GAGATCTCTG TCTCCGCCGA
AGAGGAATTC AATATCGAGA AGCTACAGTT AGTTGAAGCC GAAAAGAAGA AGATCAGGCA AGAGTACGAA CGAAAAGAGC
GTCAAGTCGA AATTCGGAAG AAGATTGAGT ACTCGATGCA GCTGAATGCC TCTCGAATTA AAGTTCTTCA AGCTCAAGAT
GATGTGATCA GTTCCATGAA AGAAGCTGCT TCCAAGGAAC TTTTGAGTGT GAGTCATCAT CATCATTTGA CTGTGACTCA
TCATGATCAT GTGTACAGAA ACCTTTTAAA AGATCTCGTT GTTCAGTGTT TGCTAAGACT GAAAGAACCT TCTGTCTTAT
TGAGATGTCG GAAAGAGGAC CTACACTTGG TAGAGCATGT GCTGGATTCT GCTGCACAGG AGTATGCTGA TAAAGCAAAT
GTTGAGCCCC CACAGATCAT TGTTGACAAC CAAGTCTATC TTCCACCTGG ACCCAGTCAT CACAATGCTC ATGATATCTA
CTGCTCTGGT GGGGTGGTTC TGGCTTCTCG TGATGGCAAG ATTGTGTGTG AGAATACTCT TGATGCACGA CTGGATGTAG
TGTTCCGTAA AAAGCTTCCA GAGATTCGAA AGCAGCTCTT TGGACAAGTT TTTGCTTGAA GATTTCTTCG AATGTATTGT
TTCGTACCCT GCAATGTTTA TATCCCGAAG CATAAGCTTG TCTTGGATCT GAATAGGTCT GCTGCCGTTG AATTATAGTT
GCTGTCTTTT GAATAACACC ATTTTTCTGT AGTTCAGTTG CTCCCATACC GTTTATGATG GGGCATGTGG TGTGCTATAA
TTTCTCTCTC ATTCCTGCTT TTTGCTTATT GGTAAATCAT GTAGCAGATA TTTATATATT GAACATAAGT ACATTATTGT
GAACATTGTG ACAGAAATAA AGTGTTCTCT TCCATCGTGT CTGGGGCAAG TGGAAACAGT GAAATGTCGG CGCCCACGCA
TTCAGGTACA TTCCTCATGT TTTGGTGATT TGGGAAACTA TGTCATTTGA TGGAAAGTAG GGATTATATT TTAAGAGAAA
TCCAATAAAA ATATATTTGA AGGGACGAAC TGAGGTAAAA AGTGGACTTA AAATAGAAAA AAAAAAACAA AGCAAAAGCA
CAATACACGA CTACTTATTT CTAGGTTAGT TAGTCGGCCA CATTAATCGC GGGTTTCCTT CCCCAATAGA TCAGTTATTA
GGTTTGGCTA TGGATTATGC TACGACTAAT CAATAGTTTA AGCAGGCTAA ATGAATATGG ATAATGGCTT AAAATCGGAC
AATTATGGCA ACGTACAATT CCTAAAACCT TTCTTGTATA ATTTATCCTT TCGTCTCTGC AGTTGTCTGC ACATCTAACC
TTTTTATAGA GTCTCTGTTT TTGCGTGGTT GTTGGTCTAT GTGCTCTTGC TTCGCTGTCT CTAGGTCCCT TAACATTTTG
CAACTTCTTT GTTGTCACAA CTTTTACGCT TATTTTCTTT AATTGCGGTG TCTATCGAAA ACCCGAAAAA GATTATTTCC
AAATTATAGT AAGGAAATAC ATTTTCTCAC TTTTAGATAT TGACTCATCT TTTTTTGTAT ACTGAAATGT GTAGAACGAT
TTCTATTGTT CCTTCGTTCC ACTCAGGGTC CAATACTACA GAACTGTGAT CGGGATTTGC AAAATGTTCT GCTAAGTCCG
CATTGGTTTT ATGGATCTAA AACTAATCGA GGTTATTCTC GGAGGAATGT GACCCTTAAT CTCGTTGAAA TTCTTGGGTT
TAGTTGAAGG AATGAGAGAA AATAGATGAA GAAAGAATTA ATATTGGTTT GGTGAACAAT GTTA

>Vigan.02G112700.01
ATGAACGACG CAGATGTCTC TAAGCAAATC CAGCAGATGG TGCGGTTCAT CCGCCAGGAA GCAGAGGAAA AAGCTAACGA
GATCTCTGTC TCCGCCGAAG AGGAATTCAA TATCGAGAAG CTACAGTTAG TTGAAGCCGA AAAGAAGAAG ATCAGGCAAG
AGTACGAACG AAAAGAGCGT CAAGTCGAAA TTCGGAAGAA GATTGAGTAC TCGATGCAGC TGAATGCCTC TCGAATTAAA
GTTCTTCAAG CTCAAGATGA TGTGATCAGT TCCATGAAAG AAGCTGCTTC CAAGGAACTT TTGAGTGTGA GTCATCATCA
TCATTTGACT GTGACTCATC ATGATCATGT GTACAGAAAC CTTTTAAAAG ATCTCGTTGT TCAGTGTTTG CTAAGACTGA
AAGAACCTTC TGTCTTATTG AGATGTCGGA AAGAGGACCT ACACTTGGTA GAGCATGTGC TGGATTCTGC TGCACAGGAG
TATGCTGATA AAGCAAATGT TGAGCCCCCA CAGATCATTG TTGACAACCA AGTCTATCTT CCACCTGGAC CCAGTCATCA
CAATGCTCAT GATATCTACT GCTCTGGTGG GGTGGTTCTG GCTTCTCGTG ATGGCAAGAT TGTGTGTGAG AATACTCTTG
ATGCACGACT GGATGTAGTG TTCCGTAAAA AGCTTCCAGA GATTCGAAAG CAGCTCTTTG GACAAGTTTT TGCTTGA

>Vigan.02G112700.01
MNDADVSKQI QQMVRFIRQE AEEKANEISV SAEEEFNIEK LQLVEAEKKK IRQEYERKER QVEIRKKIEY SMQLNASRIK
VLQAQDDVIS SMKEAASKEL LSVSHHHHLT VTHHDHVYRN LLKDLVVQCL LRLKEPSVLL RCRKEDLHLV EHVLDSAAQE
YADKANVEPP QIIVDNQVYL PPGPSHHNAH DIYCSGGVVL ASRDGKIVCE NTLDARLDVV FRKKLPEIRK QLFGQVFA*