GBrowse Details

Vigan.02G131000.01

Basic Information:
Name: Vigan.02G131000.01
Multiple alignment
Variant Information
Position: Chr02:11711253..11713447 (- strand)
Length: 2195
Functional Information:
Description: Similar to Uncharacterized protein. [I1KA82, Glycine max]
GO: Biological Process: transport (GO:0006810)
Cellular Component: integral to membrane (GO:0016021)
InterPro: GOLD (IPR009038)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:6.66,5.48,17.71,17.18,17.14,20.80,23.51,23.79
Automatic updates:
Name: NM_001250862 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100500676 (LOC100500676), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:11711253..11711833 (- strand)
Length: 581
Type: three_prime_UTR
Position: Chr02:11711834..11711978 (- strand)
Length: 145
Type: CDS
Position: Chr02:11712196..11712272 (- strand)
Length: 77
Type: CDS
Position: Chr02:11712671..11712886 (- strand)
Length: 216
Type: CDS
Position: Chr02:11713143..11713370 (- strand)
Length: 228
Type: CDS
Position: Chr02:11713371..11713447 (- strand)
Length: 77
Type: five_prime_UTR


>Vigan.02G131000.01
GGATAATTGA CAAATTTAGA TCTGAGTCCC TAAGTTGTAG GGTATCTGAT TTGGATCCAA AGGTCAACAA CTGAGCAATG
GCGAAGAACA CCAACCTAAG CTCTGGAACC CCAAATCCTC TACTCTTGTT CTTATGTTTC ACCACTCTCA TGCTCCTTCG
AACCGAGGCT GTATGGTTAA CCATCCCAAG TAAGGGAACT AAGTGCATGT CTGAGGAAAT CCAGGCACAC GTCGTCGTTT
TAGCAGATTA CTACGTTGTA GCCGAGGATG GCAAGGGTCA CCAACCTCAA ACAGTTTCTG TCAAGGTGAC ATCCCCTTAT
GGAAATAATC TTCACCAGAA TGAAAATGTT ACCCATGGTC AGTTTGCATT TACAACTTCG GAGAGTGGGA ACTATGTGGC
GTGCTTTTGG ATGGATACCA AACATCAAGA AGGTGGAGTA GAGACCACAA TCAGCCTTGA ATGGAAAACT GGAATCGCTG
CCAAAGATTG GGACTCCGTT GCAAGAAAGG AAAAGATAGA GGGTGTTGAA CTTGAGCTAA GGAAACTTGA AGGGGCCGTG
GAAGCCATCC GGGACAATCT AATTTATTTG AAGAATAGGG AAGAGGAGAT GAGGGAAGTT AGTGAAACAA CAAATGCTAG
AGTGGCTTGG TTCAGTATCT TATCTCTTGG CATCTGCATC TGTGTTTCGG TGTTGCAGCT ATGGTATCTG AAGCGCTTCT
TTCGTAAGAA GAAGCTCATA TAGATATTGC TTTATTGTGA CACTTACCCA CAGCAGATTG TTTTCTCAAG TTTTGGAGAT
GACTCAAACA TTGTATAGTT TTTCTTCTTG GGAATCCTTT TGGGGTTTGT GGGTTGACCC TGCAAGGGCT ATGCGGAAAT
TGGAGAGTTT GATTCTTTCT TTCTTGGAGC TAATCGAATG GTGGTAACTG GTTTTGATTA TTGAGCAGCT ATTATATATA
AGAGTTCCTT CAGTATTTTG TCAATTGGAA AAGGCATTCA CAGTTAGCAT TTGCTGCAAA TGATTTCCCC TGAAAGGGAC
TGATATGCCC TGTTTTTCTA GAAGGGATAG ACTTCAATCT AAGCAAATGT TTTGAGTAAA GCTTATGATA TTGATGAAAC
GAAACAAATG TGTAGAGCTG TGGGTGAAAT GTTTGTTGTG CACAAATGTT TGATGCCTTA GTTGTACTAA TTTTCCTTTT
TGAAGATATT AATTGTACGA AGTTTAAGGT GATTTAATTG AGTATTTATA TTGTAGAAGT TTCCATTTTG GAGATGCTCA
TCTTTATTAA CTTGAAACAT ATCTATGAGA GATACTTGAA ACAT

>Vigan.02G131000.01
ATGGCGAAGA ACACCAACCT AAGCTCTGGA ACCCCAAATC CTCTACTCTT GTTCTTATGT TTCACCACTC TCATGCTCCT
TCGAACCGAG GCTGTATGGT TAACCATCCC AAGTAAGGGA ACTAAGTGCA TGTCTGAGGA AATCCAGGCA CACGTCGTCG
TTTTAGCAGA TTACTACGTT GTAGCCGAGG ATGGCAAGGG TCACCAACCT CAAACAGTTT CTGTCAAGGT GACATCCCCT
TATGGAAATA ATCTTCACCA GAATGAAAAT GTTACCCATG GTCAGTTTGC ATTTACAACT TCGGAGAGTG GGAACTATGT
GGCGTGCTTT TGGATGGATA CCAAACATCA AGAAGGTGGA GTAGAGACCA CAATCAGCCT TGAATGGAAA ACTGGAATCG
CTGCCAAAGA TTGGGACTCC GTTGCAAGAA AGGAAAAGAT AGAGGGTGTT GAACTTGAGC TAAGGAAACT TGAAGGGGCC
GTGGAAGCCA TCCGGGACAA TCTAATTTAT TTGAAGAATA GGGAAGAGGA GATGAGGGAA GTTAGTGAAA CAACAAATGC
TAGAGTGGCT TGGTTCAGTA TCTTATCTCT TGGCATCTGC ATCTGTGTTT CGGTGTTGCA GCTATGGTAT CTGAAGCGCT
TCTTTCGTAA GAAGAAGCTC ATATAG

>Vigan.02G131000.01
MAKNTNLSSG TPNPLLLFLC FTTLMLLRTE AVWLTIPSKG TKCMSEEIQA HVVVLADYYV VAEDGKGHQP QTVSVKVTSP
YGNNLHQNEN VTHGQFAFTT SESGNYVACF WMDTKHQEGG VETTISLEWK TGIAAKDWDS VARKEKIEGV ELELRKLEGA
VEAIRDNLIY LKNREEEMRE VSETTNARVA WFSILSLGIC ICVSVLQLWY LKRFFRKKKL I*