GBrowse Details

Vigan.02G152200.01

Basic Information:
Name: Vigan.02G152200.01
Multiple alignment
Variant Information
Position: Chr02:14188263..14190071 (+ strand)
Length: 1809
Functional Information:
Description: Similar to Uncharacterized protein. [I1KAN3, Glycine max]
GO: Cellular Component: integral to membrane (GO:0016021)
InterPro: SWEET sugar transporter (IPR004316)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.05,9.16,19.79,2.90,6.61,39.45,3.07,0.43
Arabidopsis thaliana homolog: AT5G53190.1
Automatic updates:
Name: NM_001357928 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max sugar efflux transporter SWEET14 (GMSWEET14), mRNA.
PubMed ID: 26162601 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr02:14188263..14188311 (+ strand)
Length: 49
Type: five_prime_UTR
Position: Chr02:14188312..14188348 (+ strand)
Length: 37
Type: CDS
Position: Chr02:14188441..14188477 (+ strand)
Length: 37
Type: CDS
Position: Chr02:14188572..14188794 (+ strand)
Length: 223
Type: CDS
Position: Chr02:14189015..14189176 (+ strand)
Length: 162
Type: CDS
Position: Chr02:14189409..14189528 (+ strand)
Length: 120
Type: CDS
Position: Chr02:14189617..14189802 (+ strand)
Length: 186
Type: CDS
Position: Chr02:14189803..14190071 (+ strand)
Length: 269
Type: three_prime_UTR


>Vigan.02G152200.01
TCTAACTTCG AAGCATTCAG TATTCTAAGT TTCAGTAAGA GAACTAGAAA TGGCAGAGAC CATTCGTTTG GTTGTTGCTG
TTTTTGGCAA TGCAGCCTCA ATGTCCCTTT ATGCTGCACC AGTGGTTACC TTTAAAAGAG TTATAAGAAA GAAAAGCACA
GAGGAGTTTT CATGCATTCC TTACATTATT GGGCTCTTGA ACTGTCTTCT TTACACTTGG TATGGTTTGC CTGTTGTGAG
CTGCAAGTGG GAAAATTTCC CTATAGTCAC TGTTAATGGT GTTGGGATTG TTCTGGAGTT ATCCTATGTT CTCATTTATT
TCTGGTTTGC TTCTCGCAAA GGAAAGGTGA AGGTAGCCAT GACTGCAATA CCAGTTGTGC TTTTGTTCTG CATAATTGCT
GCAGTCTCAG CTTTTGCATT TCATGATACC CGTCACCGAA AGCTTCTTGT GGGTAGCATT GGCTTAGTTG TTTCAGTAAC
GCTGTATGGA TCTCCCCTTG TTGTAATGAA AAAAGTTATA CAAACAAAGA GTGTTGAATT CATGCCACTA ACATTATCGG
TGTGCGCATT CTTATCTTCT ACACTCTGGC TGATCTATGG AATCCTCATT AGAGATATTT TCGTAGCGGG ACCAAGTATC
CTTGGAACTC CTTTAGCCAT CCTGCAGCTT GTACTTCACT GCAGATATCG AAAAAGGAGT GTTGTGGAAG AACCAGGCAA
GGGAGACCAG GAAAAGGGTA ACTTAGAAAA GGTGGACATG GAAATAGGGA AAGTTGAAAC GAATGTGACG AATCACATGA
CCGAAAACTC GTGAACAATG TTTTAAAGGG AAAGGTTGTT GAAGATTTCA GAATGTTCTA TTCATATTCC TTTGGTTATG
TTTATTTCCT TTATTTTAAG AGACAATGGT CCTCTTAGCT TTGGATGTAA TATTTTTAGT TCTTAATAAA TGCTTTATTG
ACAAGATTTT ACTTTACCTG TTTATCTTTA TGAAGCCTCT GTGCAGTAAA AATAGAAAAT ATATATGTAA AAACCAGATG
CAAAATTTAA TGTATCTTTC TAAATTTTGG TCCACATTTC TCG

>Vigan.02G152200.01
ATGGCAGAGA CCATTCGTTT GGTTGTTGCT GTTTTTGGCA ATGCAGCCTC AATGTCCCTT TATGCTGCAC CAGTGGTTAC
CTTTAAAAGA GTTATAAGAA AGAAAAGCAC AGAGGAGTTT TCATGCATTC CTTACATTAT TGGGCTCTTG AACTGTCTTC
TTTACACTTG GTATGGTTTG CCTGTTGTGA GCTGCAAGTG GGAAAATTTC CCTATAGTCA CTGTTAATGG TGTTGGGATT
GTTCTGGAGT TATCCTATGT TCTCATTTAT TTCTGGTTTG CTTCTCGCAA AGGAAAGGTG AAGGTAGCCA TGACTGCAAT
ACCAGTTGTG CTTTTGTTCT GCATAATTGC TGCAGTCTCA GCTTTTGCAT TTCATGATAC CCGTCACCGA AAGCTTCTTG
TGGGTAGCAT TGGCTTAGTT GTTTCAGTAA CGCTGTATGG ATCTCCCCTT GTTGTAATGA AAAAAGTTAT ACAAACAAAG
AGTGTTGAAT TCATGCCACT AACATTATCG GTGTGCGCAT TCTTATCTTC TACACTCTGG CTGATCTATG GAATCCTCAT
TAGAGATATT TTCGTAGCGG GACCAAGTAT CCTTGGAACT CCTTTAGCCA TCCTGCAGCT TGTACTTCAC TGCAGATATC
GAAAAAGGAG TGTTGTGGAA GAACCAGGCA AGGGAGACCA GGAAAAGGGT AACTTAGAAA AGGTGGACAT GGAAATAGGG
AAAGTTGAAA CGAATGTGAC GAATCACATG ACCGAAAACT CGTGA

>Vigan.02G152200.01
MAETIRLVVA VFGNAASMSL YAAPVVTFKR VIRKKSTEEF SCIPYIIGLL NCLLYTWYGL PVVSCKWENF PIVTVNGVGI
VLELSYVLIY FWFASRKGKV KVAMTAIPVV LLFCIIAAVS AFAFHDTRHR KLLVGSIGLV VSVTLYGSPL VVMKKVIQTK
SVEFMPLTLS VCAFLSSTLW LIYGILIRDI FVAGPSILGT PLAILQLVLH CRYRKRSVVE EPGKGDQEKG NLEKVDMEIG
KVETNVTNHM TENS*