GBrowse Details

Vigan.02G161600.01

Basic Information:
Name: Vigan.02G161600.01
Multiple alignment
Variant Information
Position: Chr02:15584198..15586573 (- strand)
Length: 2376
Functional Information:
Description: Similar to Protein yippee-like. [V7AW60, Phaseolus vulgaris]
InterPro: Yippee/Mis18 (IPR004910)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:12.23,4.56,6.89,4.11,18.14,9.75,16.31,6.18
Arabidopsis thaliana homolog: AT4G27745.1
Automatic updates:
Name: NM_001248195 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max Yippee family putative zinc-binding protein (LOC100800980), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001250801 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527552 (LOC100527552), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001398678 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max Yippee family putative zinc-binding protein (LOC100800980), mRNA.
PubMed ID: 21667246 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr02:15584198..15584995 (- strand)
Length: 798
Type: three_prime_UTR
Position: Chr02:15584996..15585223 (- strand)
Length: 228
Type: CDS
Position: Chr02:15586141..15586233 (- strand)
Length: 93
Type: CDS
Position: Chr02:15586234..15586573 (- strand)
Length: 340
Type: five_prime_UTR


>Vigan.02G161600.01
GTTTATTGGG TCTTTATCTG ATTACCATAT GTAATGCAAT TTATTTTATT TTATTTTGAA GAGGCTAATT GGGAATCTTC
ATTAACCTTT GTGATCAAGC CTACTCTTGC ACGCTAACTA ACGACATATT TTCTTCTTAT CTTATTGTTG CAGACTTTTG
GGTCATCATT GAGCTTGGTG TAGGTAAAGA AATTTCATCA CTTTTGTTCC TCTGCGCCCT TTTCTTCATC TCATTCATTT
ATAATCGAAA CCTTTGCTCT GTTACTCCCT TGGATCACCG GTGTTTGGTT CATTTGGAGC ACTGAGGTCT TTAATCTGAT
TTTTTTTTTT TAACCAATTC ATGGCGGAAC TAATAGGACC CCGCTTGTAT TGCTGCTCTA ATTGTAGAAA CCAGGTCTCA
CTCCACGATG ATATCATTTC CAAGGCTTTT CATGGAAGAA ATGGCCGAGC CTTTCTGTTT TCCCATGCAA TGAATGTTGT
GACGGGGCCA AAAGAAGACA GGCATCTATT GACTGGCCTC CACACTGTTG CTGATGTTTA TTGTGGTGAT TGCCGTGAAG
TGTTGGGTTG GAAGTATGAA AGAGCTTATG AAGCGTCCCA GAGGTACAAG GAAGGAAAGT TCATACTTGA AAAGTCAAAA
ATTGTTAAGG ACAACTGGTA GCATTACACC GTAACCCCAA TCCATTCATT CTGCTCTTCA TGTTGCCTCT TTCATGCTTT
GTGGTGTAAT CTTGTATAGG AGAACCTTCA ACCATTTGAA AATTGTCATT GTTTCCCCAC CTTTAATTTC CTCAGGTTAT
GGCCAGAAGT GAAATTGGTA TATAAACTGT TTATTCCTTG TTAATAGTAT TGTGTATTCA TTTCTGCTCT ATGGATATCA
TGGCATGGTT ACAGATTTCT TTTTGGGGAG TCGAACTTTG CTGACAGGCA AAGTTTATTA CTCAGGTTAT GGCTTGAATC
TCTTGGATAT AAAGTAATAG ATCTTCTTAT GGTTAAATTT GATATTTGGT AATAGCACAA ATTGGCCAGC TTCAAAGTTT
GGCTTTTTGG ATGGTCCCTT TCCACGATTG AAGTTGTAAT TTTTAAGTTC TGCTTCAAAT TTTCAATTAT TGTAAGCTGT
TCGTACATAA CAGAATATAT GTTATTCTGC TTCAATATTT CTCATCCATG CATTCAGTTC TCTTGACCAT TTACAATGTT
CCGAATTTTT TGTTTTTTTG AAAGGGTAAG GATAAAGCTT TTATTAAGAA TATTAGTTTT TGCACGACAG GTGCCAAAAC
AAAGTCAATA ACATCCAACA TCAGAATAAA CAAGGAGCGA AAAAAGGGCA CCAGTTCCTC CCTGCCTACG CATCTTTACA
TTCATTAGAA GCATATCAAC TATTGAACAC TTTCCTTTAC TAGTGTGTTA CTCAAGGTAT ACATTGAATA TAATTTTTGA
AAACAATAAC TAATTTCCG

>Vigan.02G161600.01
ATGGCGGAAC TAATAGGACC CCGCTTGTAT TGCTGCTCTA ATTGTAGAAA CCAGGTCTCA CTCCACGATG ATATCATTTC
CAAGGCTTTT CATGGAAGAA ATGGCCGAGC CTTTCTGTTT TCCCATGCAA TGAATGTTGT GACGGGGCCA AAAGAAGACA
GGCATCTATT GACTGGCCTC CACACTGTTG CTGATGTTTA TTGTGGTGAT TGCCGTGAAG TGTTGGGTTG GAAGTATGAA
AGAGCTTATG AAGCGTCCCA GAGGTACAAG GAAGGAAAGT TCATACTTGA AAAGTCAAAA ATTGTTAAGG ACAACTGGTA
G

>Vigan.02G161600.01
MAELIGPRLY CCSNCRNQVS LHDDIISKAF HGRNGRAFLF SHAMNVVTGP KEDRHLLTGL HTVADVYCGD CREVLGWKYE
RAYEASQRYK EGKFILEKSK IVKDNW*