GBrowse Details

Vigan.02G177000.01

Basic Information:
Name: Vigan.02G177000.01
Multiple alignment
Variant Information
Position: Chr02:18289956..18292644 (- strand)
Length: 2689
Functional Information:
Description: Similar to Uncharacterized protein. [I1KB59, Glycine max]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:39.18,3.25,11.14,11.70,34.39,60.77,45.78,37.72
Arabidopsis thaliana homolog: AT3G10870.1
Automatic updates:
Name: BT092689 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-22C2 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:18289956..18290025 (- strand)
Length: 70
Type: three_prime_UTR
Position: Chr02:18290026..18290304 (- strand)
Length: 279
Type: CDS
Position: Chr02:18290699..18290833 (- strand)
Length: 135
Type: CDS
Position: Chr02:18291935..18292075 (- strand)
Length: 141
Type: CDS
Position: Chr02:18292166..18292450 (- strand)
Length: 285
Type: CDS
Position: Chr02:18292451..18292644 (- strand)
Length: 194
Type: five_prime_UTR


>Vigan.02G177000.01
TGAAAATGAC CCCAAGAAGG AATGAATAGA TATAAATATA AAGCTCTGAA TATTGGAATA ATATTAAGAA GGAAAGTTAC
AAAGATAAAC GTCACTACTC GTGCTGCTGA GCTGACCCTT CAACACGTAT TATTGTTATC GTATATATTA TATATGTGAG
TGTGTTTTTC CTGACCAAGA AGATTGAAAG AAAAATGATA GTGAAGGCAG AGAAAAGTAT GACTGAGGGA GGTAGGGAAG
ACGGAGATGT TGTTGGTGTT GGGTTGAAGC AGCACTTTGT GCTTGTACAT GGCATAGGTG GGGGAAGTTG GTGCTGGTAC
AAAATCCGAT GCCTTATGGA GAATTCTGGC TATAAGGTGT CATGCATAAA CCTGAAAAGT GCTGGAATTG ATCAATCTGA
TGCAGATTCT TTGCTATTCT TTGATGATTA TAATAAACCT CTAATGGATT TCATGTCTTC TTTGCCTGAG AATGAACAGG
TTATATTGGT GGGGCACAGC GCTGGAGGCT TGAGCATTAC TCAGGCCTGT CACAAGTTTG CAAATAAGAT CCGTTTAGCT
GTTTATGTGG CAGCCACTAT GCTCAAATCG GGATACTTGA CCGAACAAGA TCTCAAAGAT GGTGTGCCTG ACTTATCTGA
ATATGGGGAT GTGTACGAGC TAGGATTCGG ATTGGGACGT GATAAGCCTC CAACCAGTGC TTTGGTGAAG AGAGAATTTC
AACGCAAAAT CCTCTACCCT TTGAGCCCTC AAGAGGATTC AACCTTGGCT GAGATGCTGT TGAGGCCAGG GCCATTGGTA
GCATTGACGA GTGCACAATT CAGAGAAGAG GGTGATGAAG GAGTGGAGAA GGTGCCCCGC GTGTACATAA GGACAAAGCA
AGACAAGGTG GTGAAGGCAG AGCAACAGGA AGCCATGATA AAGAAGTGGC CACCATCTAC TGTGTATGAA CTGGACACAG
ACCATAGCCC TTTCTTCTCT TCCCCATTCC TTCTCTTTGG CTTGCTTCTA AAAGCTGCAG CTTTGGATGT TTAATTCCAT
GCAACTGCTC TATGAACACT GCTCTTCCAT GCTCTTTTCT TCGTTGCTCT CCAAAACTCT GAAT

>Vigan.02G177000.01
ATGATAGTGA AGGCAGAGAA AAGTATGACT GAGGGAGGTA GGGAAGACGG AGATGTTGTT GGTGTTGGGT TGAAGCAGCA
CTTTGTGCTT GTACATGGCA TAGGTGGGGG AAGTTGGTGC TGGTACAAAA TCCGATGCCT TATGGAGAAT TCTGGCTATA
AGGTGTCATG CATAAACCTG AAAAGTGCTG GAATTGATCA ATCTGATGCA GATTCTTTGC TATTCTTTGA TGATTATAAT
AAACCTCTAA TGGATTTCAT GTCTTCTTTG CCTGAGAATG AACAGGTTAT ATTGGTGGGG CACAGCGCTG GAGGCTTGAG
CATTACTCAG GCCTGTCACA AGTTTGCAAA TAAGATCCGT TTAGCTGTTT ATGTGGCAGC CACTATGCTC AAATCGGGAT
ACTTGACCGA ACAAGATCTC AAAGATGGTG TGCCTGACTT ATCTGAATAT GGGGATGTGT ACGAGCTAGG ATTCGGATTG
GGACGTGATA AGCCTCCAAC CAGTGCTTTG GTGAAGAGAG AATTTCAACG CAAAATCCTC TACCCTTTGA GCCCTCAAGA
GGATTCAACC TTGGCTGAGA TGCTGTTGAG GCCAGGGCCA TTGGTAGCAT TGACGAGTGC ACAATTCAGA GAAGAGGGTG
ATGAAGGAGT GGAGAAGGTG CCCCGCGTGT ACATAAGGAC AAAGCAAGAC AAGGTGGTGA AGGCAGAGCA ACAGGAAGCC
ATGATAAAGA AGTGGCCACC ATCTACTGTG TATGAACTGG ACACAGACCA TAGCCCTTTC TTCTCTTCCC CATTCCTTCT
CTTTGGCTTG CTTCTAAAAG CTGCAGCTTT GGATGTTTAA 

>Vigan.02G177000.01
MIVKAEKSMT EGGREDGDVV GVGLKQHFVL VHGIGGGSWC WYKIRCLMEN SGYKVSCINL KSAGIDQSDA DSLLFFDDYN
KPLMDFMSSL PENEQVILVG HSAGGLSITQ ACHKFANKIR LAVYVAATML KSGYLTEQDL KDGVPDLSEY GDVYELGFGL
GRDKPPTSAL VKREFQRKIL YPLSPQEDST LAEMLLRPGP LVALTSAQFR EEGDEGVEKV PRVYIRTKQD KVVKAEQQEA
MIKKWPPSTV YELDTDHSPF FSSPFLLFGL LLKAAALDV*