GBrowse Details

Vigan.02G192500.01

Basic Information:
Name: Vigan.02G192500.01
Multiple alignment
Variant Information
Position: Chr02:24341708..24344637 (+ strand)
Length: 2930
Functional Information:
Description: Similar to LEAFY-like protein. [Q0GYP2, Glycine max]
GO: Biological Process: regulation of transcription, DNA-dependent (GO:0006355)
Molecular Function: DNA binding (GO:0003677)
InterPro: Floricaula/leafy protein (IPR002910)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.03,1.68,2.00,0.22,0.29,0.00,0.05,0.17
Arabidopsis thaliana homolog: AT5G61850.1
Automatic updates:
Name: NM_001317697 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max protein UNIFOLIATA-like (LOC100799720), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:24341708..24342248 (+ strand)
Length: 541
Type: five_prime_UTR
Position: Chr02:24342249..24342723 (+ strand)
Length: 475
Type: CDS
Position: Chr02:24343137..24343510 (+ strand)
Length: 374
Type: CDS
Position: Chr02:24344040..24344402 (+ strand)
Length: 363
Type: CDS
Position: Chr02:24344403..24344637 (+ strand)
Length: 235
Type: three_prime_UTR


>Vigan.02G192500.01
CACTCTAACT CTTGGTTAAG CAAAACTGTA CCACTGTGAG GACCACCCTG ATTAAGTACA CACCAACACA TATATGAGCA
AACAGAATTG ACAAACCCAA AAAAATCAGT CAAATCACAA GTCAAACCTC ATCTCCTGAA TGAACGAGAA ATTACTACGA
CACCAAACCA TGGATGATGA GAGATTAATT TTATCACGTA AAGGTTGACA AGAGAGTGTG AAATTTTTTG TTGAACGAAG
CTTTGGAGAG TTCAGTTTGA GAGTAACTAA AAGGGAACCA AGGGTCAAGA GTTTCAAGAA AGATCTCACT GAGACGCAAA
AAGGGGGTGA GAGCAAGAAA CCACAACCAG GAACCAGTCT CGGGAAAAAC ACCCCAGAAT CAAATCAGAA TCATGGAAAA
GGGTAGTTTG GAGAATTAAC CCCTCTCTTT CTCTCTGCAC AGGAAATTAA CCCCTCTCTC TTTCGCCACC TTTATGCTTT
CGCCTTTATC TCCACCCAAA CAGTACCACA CACTCACCTT CCACTCCTCA CTTTCCAAAC CATGGATCCG GACGCATTCA
CAGCCAGCCT ATTCAAGTGG GACCCACGCA CCGTCCTCCC CGCCGCACCG CCCTCCCGGC CCCCGCCGCC GCTCCTAGAC
TATGCTGTCG CCCCTCCCTC AGTCGCCCCG TCTTACCACC CCGCGAGGGC GGTGCCCCGC GAGCTCGGAG GCCTCGAGGA
GCTTTTCCAG GCCTACGGCA TCCGCTACTA CACGGCTGCC AAGATCGCCG AGCTCGGGTT CACGGTGAGC ACGCTGGTGG
ACATGAAAGA CGAGGAGCTC GACGACATGA TGAACAGCCT CTCCCAGATT TTCCGCTGGG ATCTCCTCGT CGGTGAACGC
TACGGCATCA AAGCCGCCGT CAGAGCCGAA CGACGTCGCA TCGACGACGA GGACATCAAA CGCCGCACTG GCAACCTCCT
CTCCACCGAC ACCACCACCA CCACCACCAA CGCCCTCGAT GCCCTCTCTC AAGAAGGTTT GTCGGAGGAG CCAGTGGTGC
AACGAGAGAA GGAGGCGGTG GGGAGCGGGG GAGGGAGCAC GTGGGAGGTG GTTGCGTTGG AGGAGAGGAG GAAGCAGCAG
AGGAGGCGGA GAACGAAGAT GAAGGAGCAG GAGGAGAAGG AGGAGGTAGA GGATGAGGAG GGAGAAGAGA ACGAGGAGGG
TAACAACAAC AGTGGTGGAG GTTGTGAGAG GCAGAGGGAG CACCCGTTCA TCGTGACGGA GCCTGGGGAG GTTGCACGTG
GGAAGAAGAA TGGGTTGGAC TATCTGTTTC ACCTCTACGA GCAGTGCCGC GAGTTCTTGA TGCAGGTCCA GGCCATCGCG
AAGGACCGCG GTGAAAAATG CCCCACCAAG GTGACAAATC AGGTGTTTAG GTACGCGAAG AAAGCTGGAG CGAGCTACAT
CAACAAGCCA AAGATGCGAC ACTACGTCCA CTGCTATGCC TTGCACTGTC TGGACGAGGA GGTGTCGAAC GAGCTTCGTA
GGGCGTTCAA GGAGAGAGGA GAGAACGTTG GAGCGTGGAG ACAAGCATGT TACAAGCCCC TTGTGGCCAT CGCAGCGCGT
CAAGGTTGGG ATATTGATGC CATATTCAAC GCCCACCCTC GTCTTTCCAT TTGGTACGTT CCCACCAAGC TCCGTCAGCT
TTGTCACGCC GAGAGAAACA CAGCCGCCGC TTCCAGCTCT GTCTCTGTCG GCAGTGCTCA CCTTCCCTTC TAGATATGCA
TGTATTGCTG CTTCAGTAAC TGCCATAGTT AGTAATAGAT ATATTTAGTT ACTATTATTA TTATTATATG AGTAGAACCT
CCCAGCCACG TTATGAAATG AACAACATAT GTATAGCAAC GGAGGACTTT TTTTAGCAAC CAAAAAATGC GTATCTCGAT
TACCTATCTT TCATAAATCA TTTACTTCCT TTGTAATTTA GTACTTCTTC ATCGTTTGTA TGTTTGTG

>Vigan.02G192500.01
ATGGATCCGG ACGCATTCAC AGCCAGCCTA TTCAAGTGGG ACCCACGCAC CGTCCTCCCC GCCGCACCGC CCTCCCGGCC
CCCGCCGCCG CTCCTAGACT ATGCTGTCGC CCCTCCCTCA GTCGCCCCGT CTTACCACCC CGCGAGGGCG GTGCCCCGCG
AGCTCGGAGG CCTCGAGGAG CTTTTCCAGG CCTACGGCAT CCGCTACTAC ACGGCTGCCA AGATCGCCGA GCTCGGGTTC
ACGGTGAGCA CGCTGGTGGA CATGAAAGAC GAGGAGCTCG ACGACATGAT GAACAGCCTC TCCCAGATTT TCCGCTGGGA
TCTCCTCGTC GGTGAACGCT ACGGCATCAA AGCCGCCGTC AGAGCCGAAC GACGTCGCAT CGACGACGAG GACATCAAAC
GCCGCACTGG CAACCTCCTC TCCACCGACA CCACCACCAC CACCACCAAC GCCCTCGATG CCCTCTCTCA AGAAGGTTTG
TCGGAGGAGC CAGTGGTGCA ACGAGAGAAG GAGGCGGTGG GGAGCGGGGG AGGGAGCACG TGGGAGGTGG TTGCGTTGGA
GGAGAGGAGG AAGCAGCAGA GGAGGCGGAG AACGAAGATG AAGGAGCAGG AGGAGAAGGA GGAGGTAGAG GATGAGGAGG
GAGAAGAGAA CGAGGAGGGT AACAACAACA GTGGTGGAGG TTGTGAGAGG CAGAGGGAGC ACCCGTTCAT CGTGACGGAG
CCTGGGGAGG TTGCACGTGG GAAGAAGAAT GGGTTGGACT ATCTGTTTCA CCTCTACGAG CAGTGCCGCG AGTTCTTGAT
GCAGGTCCAG GCCATCGCGA AGGACCGCGG TGAAAAATGC CCCACCAAGG TGACAAATCA GGTGTTTAGG TACGCGAAGA
AAGCTGGAGC GAGCTACATC AACAAGCCAA AGATGCGACA CTACGTCCAC TGCTATGCCT TGCACTGTCT GGACGAGGAG
GTGTCGAACG AGCTTCGTAG GGCGTTCAAG GAGAGAGGAG AGAACGTTGG AGCGTGGAGA CAAGCATGTT ACAAGCCCCT
TGTGGCCATC GCAGCGCGTC AAGGTTGGGA TATTGATGCC ATATTCAACG CCCACCCTCG TCTTTCCATT TGGTACGTTC
CCACCAAGCT CCGTCAGCTT TGTCACGCCG AGAGAAACAC AGCCGCCGCT TCCAGCTCTG TCTCTGTCGG CAGTGCTCAC
CTTCCCTTCT AG

>Vigan.02G192500.01
MDPDAFTASL FKWDPRTVLP AAPPSRPPPP LLDYAVAPPS VAPSYHPARA VPRELGGLEE LFQAYGIRYY TAAKIAELGF
TVSTLVDMKD EELDDMMNSL SQIFRWDLLV GERYGIKAAV RAERRRIDDE DIKRRTGNLL STDTTTTTTN ALDALSQEGL
SEEPVVQREK EAVGSGGGST WEVVALEERR KQQRRRRTKM KEQEEKEEVE DEEGEENEEG NNNSGGGCER QREHPFIVTE
PGEVARGKKN GLDYLFHLYE QCREFLMQVQ AIAKDRGEKC PTKVTNQVFR YAKKAGASYI NKPKMRHYVH CYALHCLDEE
VSNELRRAFK ERGENVGAWR QACYKPLVAI AARQGWDIDA IFNAHPRLSI WYVPTKLRQL CHAERNTAAA SSSVSVGSAH
LPF*